Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012610.3.1
CDS Infomation

appr-1-p processing enzyme family protein (AHRD V3.3 *** AT1G69340.2)
Sequence

ATGTATCGGCCTGTAGCAACTACTACCCGAGGAGGGGTACCAACTGATAGTGGAGATTCT
GTGGTGACACTGGATCAAGTTCCACGTTGGATTGATTCTGACATTAGGTACTTGTATGAG
AATGAAGACCCTAATTCCGACTATGCAGATCCTTTGTCATCTGCTTCAGGGTCTGAGGGC
AATGCGAATGGTATTGTTTCCAAGTTTCCTGTGGATCATGAGATTAACTCCAAGATATAC
CTGTGGAGAGGAGACCCCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACAAATGAG
AATTTAGATGAAGCACACAGCAGCCCTGGATTGCATGCTGCAGCTGGACCTGGACTTGCA
GAGGAATGTGCTACACTCGGAGGATGCCGGACAGGAATGGCAAAAGTTACCAATGCTTAT
GATCTCCCTGCTAGGAGGGTCATTCACACTGTTGGTCCGAAGTATGCGGTAAAATACCAC
ACTGCTGCCGAGAACGCTCTAAGTCATTGCTATCGCTCTTGCCTTGAACTTCTTATAGAA
AATGGATTACAGAGCATTGCGATGGGCTGTATCTATACCGAAGCCAAAAATTACCCGCGA
GAACCTGCTGCTCATGTTGCAATAAGAACTGTACGGCGGTTTCTTGAGAAACAGAAAGAT
AAAATAGAGGCAGTCGTTTTCTGTACAACTACATCATCCGATACGGAGATATATAAAAGA
TTGCTTCCTCTTTACTTCCCCCGGGATAATCATGAGGAAGAAATTGCCCGGTTAAAACTT
CCTGCAGATGTTGGGGATGAGAATGGAGAGACAACTACTGCTGAGCGTAAAATAAGAATA
AAACCATTGCCAAATTCAAAAGTTTCTAGTCCAAGGACCCCCCAAGCATCTGTTGATCTA
TCTGTCAGTAATCTTGGTTTGTCCAGAAGGAGTTCATCCTACTTGGATGCATTTCTGGAT
CCTGCTTTTATGTCCCTGATCAAAGACCCAGATCAGCGACGTAAAGAACAATGGGAAAAA
ACAGCCCAAGCGCAAAATAATTGGAACTGCTTCAAAATGCTTGGATATGGTGACCTTGGG
GGACCTGCTTTATCAGCTGCAGAAGAATATACCCTTCATTCTAGATATCTTGCAAAAGCG
AATTCTATGAATCTTTCAGAAATTGCGGAAATGAAAATCGTTTACCGAGGAGGGGTTGAT
AGTGAGGGTCGTCCAGTTATGGTAGTCGTGGGAGCACATTTCCTGCTAAGATGTCTTGAT
CTTGAGAGATTTACCCTGTACGTTGTAAAGGAGTTCGAGCCTGTGATTCAGAAGCCTTAC
TCAATAGTGTATTTACATTCTGCAGCGTCTTTACAGATGCAACCAGATTTAGGCTGGATG
AAGAGATTACAACAAATACTTGGACGGAAACACCAGCGTAACCTTCATGCAATATACGTG
CTTCACCCTACCTTTGGACTGAAGTCTGCAATTTTTGCTTTGCAACTCTTCGTCGATAAT
GTGGTGTGGAAAAAAGTAGTATATCTTGATCGTCTTCTACAGCTATTCCGCTATGTTCCT
CGTGAACAGTTAACTATTCCTGACTTTGTATTCCAGCATGATTTGGAAGTGAATGGAGGG
AAGGGCCTAATCGTTGATCCGAGAACAAAATATGTTTATCAGAGACCTTAG

Peptide Sequence

PEP ID

Solyc05g012610.3.1
PEP Infomation

appr-1-p processing enzyme family protein (AHRD V3.3 *** AT1G69340.2)
Sequence

MYRPVATTTRGGVPTDSGDSVVTLDQVPRWIDSDIRYLYENEDPNSDYADPLSSASGSEG
NANGIVSKFPVDHEINSKIYLWRGDPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLA
EECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIE
NGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKIEAVVFCTTTSSDTEIYKR
LLPLYFPRDNHEEEIARLKLPADVGDENGETTTAERKIRIKPLPNSKVSSPRTPQASVDL
SVSNLGLSRRSSSYLDAFLDPAFMSLIKDPDQRRKEQWEKTAQAQNNWNCFKMLGYGDLG
GPALSAAEEYTLHSRYLAKANSMNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLD
LERFTLYVVKEFEPVIQKPYSIVYLHSAASLQMQPDLGWMKRLQQILGRKHQRNLHAIYV
LHPTFGLKSAIFALQLFVDNVVWKKVVYLDRLLQLFRYVPREQLTIPDFVFQHDLEVNGG
KGLIVDPRTKYVYQRP*

Transcript Sequence

Transcript ID

Solyc05g012610.3.1
Transcript Infomation

appr-1-p processing enzyme family protein (AHRD V3.3 *** AT1G69340.2)
Sequence

ACCCACAATGATAACTTAAAGCTAAAAAATTCCACAAATTCCCAAATCCACTCCTCCATC
TCCAAAGGGAGTCCCGATTTTGGCTATAGCTCATTTTTTGGACCCCACCCCTCCAGCACA
ATTCCCTCCTATTGCCAACCTAGCTTGTTGTCTTGTTGAAATTTCACATCCATTCACAGG
TGATTTTCTTGAAGAATTCTCAAAGGGGGATTTGATTCTTTTGGTGGAAACGTGGGGTTA
CTGAATTTTTTCAGTATGTGTTTGACTTTAGCTGTTATCGAACAAAGGAGAATATTCTGT
TCTTTATGAAGGAATAGGAGTGAGATTCGAGTTAAGAGAAGGAAATTATGTATCGGCCTG
TAGCAACTACTACCCGAGGAGGGGTACCAACTGATAGTGGAGATTCTGTGGTGACACTGG
ATCAAGTTCCACGTTGGATTGATTCTGACATTAGGTACTTGTATGAGAATGAAGACCCTA
ATTCCGACTATGCAGATCCTTTGTCATCTGCTTCAGGGTCTGAGGGCAATGCGAATGGTA
TTGTTTCCAAGTTTCCTGTGGATCATGAGATTAACTCCAAGATATACCTGTGGAGAGGAG
ACCCCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACAAATGAGAATTTAGATGAAG
CACACAGCAGCCCTGGATTGCATGCTGCAGCTGGACCTGGACTTGCAGAGGAATGTGCTA
CACTCGGAGGATGCCGGACAGGAATGGCAAAAGTTACCAATGCTTATGATCTCCCTGCTA
GGAGGGTCATTCACACTGTTGGTCCGAAGTATGCGGTAAAATACCACACTGCTGCCGAGA
ACGCTCTAAGTCATTGCTATCGCTCTTGCCTTGAACTTCTTATAGAAAATGGATTACAGA
GCATTGCGATGGGCTGTATCTATACCGAAGCCAAAAATTACCCGCGAGAACCTGCTGCTC
ATGTTGCAATAAGAACTGTACGGCGGTTTCTTGAGAAACAGAAAGATAAAATAGAGGCAG
TCGTTTTCTGTACAACTACATCATCCGATACGGAGATATATAAAAGATTGCTTCCTCTTT
ACTTCCCCCGGGATAATCATGAGGAAGAAATTGCCCGGTTAAAACTTCCTGCAGATGTTG
GGGATGAGAATGGAGAGACAACTACTGCTGAGCGTAAAATAAGAATAAAACCATTGCCAA
ATTCAAAAGTTTCTAGTCCAAGGACCCCCCAAGCATCTGTTGATCTATCTGTCAGTAATC
TTGGTTTGTCCAGAAGGAGTTCATCCTACTTGGATGCATTTCTGGATCCTGCTTTTATGT
CCCTGATCAAAGACCCAGATCAGCGACGTAAAGAACAATGGGAAAAAACAGCCCAAGCGC
AAAATAATTGGAACTGCTTCAAAATGCTTGGATATGGTGACCTTGGGGGACCTGCTTTAT
CAGCTGCAGAAGAATATACCCTTCATTCTAGATATCTTGCAAAAGCGAATTCTATGAATC
TTTCAGAAATTGCGGAAATGAAAATCGTTTACCGAGGAGGGGTTGATAGTGAGGGTCGTC
CAGTTATGGTAGTCGTGGGAGCACATTTCCTGCTAAGATGTCTTGATCTTGAGAGATTTA
CCCTGTACGTTGTAAAGGAGTTCGAGCCTGTGATTCAGAAGCCTTACTCAATAGTGTATT
TACATTCTGCAGCGTCTTTACAGATGCAACCAGATTTAGGCTGGATGAAGAGATTACAAC
AAATACTTGGACGGAAACACCAGCGTAACCTTCATGCAATATACGTGCTTCACCCTACCT
TTGGACTGAAGTCTGCAATTTTTGCTTTGCAACTCTTCGTCGATAATGTGGTGTGGAAAA
AAGTAGTATATCTTGATCGTCTTCTACAGCTATTCCGCTATGTTCCTCGTGAACAGTTAA
CTATTCCTGACTTTGTATTCCAGCATGATTTGGAAGTGAATGGAGGGAAGGGCCTAATCG
TTGATCCGAGAACAAAATATGTTTATCAGAGACCTTAGTGTCCATATCCATGAGCTAAAA
GATTCATCAGTTAAACCAGCTATGGAGCAAATTGTGAGATAATGAAGCTGGGTTATCTCT
TGTTAATTTCTCTGTTGTTTGTAAAATTTTATTTGTTGATTAATTTGTGCAGACAATGTT
GTCTTGCCTCCTGTGGCAATAAAATGACCCCCTCCCCTATCGTTTTCCATGTAATGAATG
TATATTTTATTTAGAATTTGATTTTATATTTAGTCGACATTAA