Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012590.3.1
CDS Infomation

Ankyrin repeat family protein (AHRD V3.3 *** AT2G03430.1)
Sequence

ATGGAACCGGAAAAATCCTCAGCTCAAATCAAAGACAAAGATTTGTTCAAAGCCGCTGAA
TCTGGTGATTCATCGCTCTTCAAATCACTTCCTGAAGAACAACTCCTCAAATCCCTCTCT
CTCCGTAATGAAGATGATCGTTCTCTCCTTCACGTTGCCGTCTCTTTCGGACACTCTGAG
GTGGTGAAGATTCTTGCAGCTGCTGATCCGTCAGTGAGTGGTATAAATAGTGGTGATGAA
GAAGGTTGGGTGCCGTTGCATTCTGCCGCAAGCAGTGGTAATGTGGAAATTGTGGAGATT
TTGCTTAGCAGAGGGGCTGATGTAAATCTGAAAAATGATGGTGGCCGCACTGCTCTTCAT
TATGCTGCTAGCAAGGGTCAAGTGAAAATAGCTGAACTTTTGATTTCACGTGGTGCTAAG
ATCAATGCAAAAGACAAGGCTTGTAATCTTATGCTTTGGACTACTCATCTCCTTGAAAAG
CTTATTATATTTGATAGATGCACCCCATTGCATCGTGCAGCTAGCACGGGGAACTCTCAG
CTGTGTGAACTATTAGTTGAGGAAGGCGCTGAAGTTGATGAAGTTGACAAGGCAGGGGAA
ACACCTCTGATGACTGCTGTTGTATGCGGCAATAAAGAGGTAGCTTTGCTCCTCATAAGA
CATGGAGCAGATGTTGACATTGAGGACAAGGAAGGGTACACTGTTCTTGGTCGAGCTTCT
AATGATCTTCGTCCAGTATTAGTCGATGCTGCAAAGATGATGCTCGAAGGATAA

Peptide Sequence

PEP ID

Solyc05g012590.3.1
PEP Infomation

Ankyrin repeat family protein (AHRD V3.3 *** AT2G03430.1)
Sequence

MEPEKSSAQIKDKDLFKAAESGDSSLFKSLPEEQLLKSLSLRNEDDRSLLHVAVSFGHSE
VVKILAAADPSVSGINSGDEEGWVPLHSAASSGNVEIVEILLSRGADVNLKNDGGRTALH
YAASKGQVKIAELLISRGAKINAKDKACNLMLWTTHLLEKLIIFDRCTPLHRAASTGNSQ
LCELLVEEGAEVDEVDKAGETPLMTAVVCGNKEVALLLIRHGADVDIEDKEGYTVLGRAS
NDLRPVLVDAAKMMLEG*

Transcript Sequence

Transcript ID

Solyc05g012590.3.1
Transcript Infomation

Ankyrin repeat family protein (AHRD V3.3 *** AT2G03430.1)
Sequence

CCCTCCATTTCATCTCAAAACTATACATCGGCAAATTCAGAGTCTTCAGTTTCAAAACCC
CACCGGGCGCCAGCTAAAACCCTACTGATACCCTACCGTCCGTACAAATCCCGGCGTAAA
TGGAACCGGAAAAATCCTCAGCTCAAATCAAAGACAAAGATTTGTTCAAAGCCGCTGAAT
CTGGTGATTCATCGCTCTTCAAATCACTTCCTGAAGAACAACTCCTCAAATCCCTCTCTC
TCCGTAATGAAGATGATCGTTCTCTCCTTCACGTTGCCGTCTCTTTCGGACACTCTGAGG
TGGTGAAGATTCTTGCAGCTGCTGATCCGTCAGTGAGTGGTATAAATAGTGGTGATGAAG
AAGGTTGGGTGCCGTTGCATTCTGCCGCAAGCAGTGGTAATGTGGAAATTGTGGAGATTT
TGCTTAGCAGAGGGGCTGATGTAAATCTGAAAAATGATGGTGGCCGCACTGCTCTTCATT
ATGCTGCTAGCAAGGGTCAAGTGAAAATAGCTGAACTTTTGATTTCACGTGGTGCTAAGA
TCAATGCAAAAGACAAGGCTTGTAATCTTATGCTTTGGACTACTCATCTCCTTGAAAAGC
TTATTATATTTGATAGATGCACCCCATTGCATCGTGCAGCTAGCACGGGGAACTCTCAGC
TGTGTGAACTATTAGTTGAGGAAGGCGCTGAAGTTGATGAAGTTGACAAGGCAGGGGAAA
CACCTCTGATGACTGCTGTTGTATGCGGCAATAAAGAGGTAGCTTTGCTCCTCATAAGAC
ATGGAGCAGATGTTGACATTGAGGACAAGGAAGGGTACACTGTTCTTGGTCGAGCTTCTA
ATGATCTTCGTCCAGTATTAGTCGATGCTGCAAAGATGATGCTCGAAGGATAAACTCCAC
GACCTCATGATAGCTCATCAGAAAACGCAAGCCAACTCTGTAAATGTTCAACCTGAAGCG
TGCTCAACTAGACACATACCGATGAATATTCTGGAACTATTTAGTTGTAGGGCAGAAAAC
CTAAATGTTGTACTTAACTCTTGGTGATGCTCCTTTAGTTATGACAAGTGCATCCATTTT
AGAAAATCTTGATAATTGACTCAAACTTTTGTATCGAAAGATATTTAAATTTATTTAAAC
AAGAGTCAACATTAAATAACAACAAAATAGCGAGTAAATGATATAAA