Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012570.3.1
CDS Infomation

LOW QUALITY:Nodulin-related protein 1, putative (AHRD V3.3 *-* A0A061EHK7_THECC)
Sequence

ATGGATGCTCTTTTTGCTAAAGGAAAAGAATTTCTTAATTCCAAAGATAAAGATGATGAA
AAAGAAACTCCCAATCGCAGTGAAAGAACAAAACATCATGATGACGTGGATGATTCCGAT
GACCACCCACAAAGAAAAACTGCCGGCAAGTCTGGCGGCGGCGGCGGTCGAGGTGGTGGC
TGGTCGGACAGCGAAGGTGACGACGAGAGGCCCGCTGGCGCCGGACGTGGTGGCGGTAAG
GCGGCGGCAGGCACCGGTGCTCAAAATCCAAATGAGCACAAACAGCCAACAACCTCTGAG
CTAATGGCCAGCGCGAAGTTGGTCGCTGCAGCTGCACAATCCCAATTAGGCGGCGGCGGC
GAGGGTAAGCCAAAAGAAGAATTGGACACCGGAAAGCTTGCCGGAGCCGCCGCCGACATC
CTTGCAGCCGCTTCCCATTACGGCAAACTAGGAGATGATGGAATCGGTAAGTACATCGGA
CAAGCCGAGGATTATCTTCATGGATACGAGCTTAAGAATTCAAAACCCAACAAATCTGGT
AGTGGTGCTGGTGCTGATGCTGAATCTGGTAGTGGTACTGGTGCTGCATCCAAAAAGAGC
ACTTCTAGTAATGCGGAGCACAAGAACTCATCGGAGTCTCACCCACGTGGCAATACAAGA
GATGATGATGATCATGATGATGAGCGTAGAGAGCACGCCACGAAAGAGAAGAAGATGGCA
TCAAAGAAACCATCCGGTGACAATCAAAGTCATGATCGTGAGGAAGTAGGTAGAGGGATG
CCTAAGAAACAAGTTGGTGATGATCATTCCGCAGATGAGCACACGATGAAAGGTAAAGAA
ATGCCTCAGAAACAATCCGGTGGTCGTGAACGTTCCAAAGAAGACGATGATGATCCGAGA
TCTGGACGTGGTGAAAGTGAAGGAATAGCGAAGAAAAAACCTGTTGGGCATGGCCATGAT
GAAGATGATAGTCGCTCTGGAGGGGGTTATGGTGAATACATAAAAAAAGCACAAGGATTT
CTCAATAAAAAGTCCGACGGTGGTAATGGAAGTCCAAAGGCCGATGGAGATTCCGGAGGT
GGGGTCATGAAAATGGCTCAAGGTTTGTTTAAGAAAGATTCAGACGACCGTAGCCCCAAC
AAACACGACGAAGATGGGAACAAAACAGATTATCTCAAGATGGCCGGAAGTTTTTTCAAG
TAG

Peptide Sequence

PEP ID

Solyc05g012570.3.1
PEP Infomation

LOW QUALITY:Nodulin-related protein 1, putative (AHRD V3.3 *-* A0A061EHK7_THECC)
Sequence

MDALFAKGKEFLNSKDKDDEKETPNRSERTKHHDDVDDSDDHPQRKTAGKSGGGGGRGGG
WSDSEGDDERPAGAGRGGGKAAAGTGAQNPNEHKQPTTSELMASAKLVAAAAQSQLGGGG
EGKPKEELDTGKLAGAAADILAAASHYGKLGDDGIGKYIGQAEDYLHGYELKNSKPNKSG
SGAGADAESGSGTGAASKKSTSSNAEHKNSSESHPRGNTRDDDDHDDERREHATKEKKMA
SKKPSGDNQSHDREEVGRGMPKKQVGDDHSADEHTMKGKEMPQKQSGGRERSKEDDDDPR
SGRGESEGIAKKKPVGHGHDEDDSRSGGGYGEYIKKAQGFLNKKSDGGNGSPKADGDSGG
GVMKMAQGLFKKDSDDRSPNKHDEDGNKTDYLKMAGSFFK*

Transcript Sequence

Transcript ID

Solyc05g012570.3.1
Transcript Infomation

LOW QUALITY:Nodulin-related protein 1, putative (AHRD V3.3 *-* A0A061EHK7_THECC)
Sequence

GAATCACATTTTAATTGCTTCAATTTGTAATAATACTATACTAATTTTCTTATTAACTAT
CTAAAACAAAAAAAAAATTATGGATGCTCTTTTTGCTAAAGGAAAAGAATTTCTTAATTC
CAAAGATAAAGATGATGAAAAAGAAACTCCCAATCGCAGTGAAAGAACAAAACATCATGA
TGACGTGGATGATTCCGATGACCACCCACAAAGAAAAACTGCCGGCAAGTCTGGCGGCGG
CGGCGGTCGAGGTGGTGGCTGGTCGGACAGCGAAGGTGACGACGAGAGGCCCGCTGGCGC
CGGACGTGGTGGCGGTAAGGCGGCGGCAGGCACCGGTGCTCAAAATCCAAATGAGCACAA
ACAGCCAACAACCTCTGAGCTAATGGCCAGCGCGAAGTTGGTCGCTGCAGCTGCACAATC
CCAATTAGGCGGCGGCGGCGAGGGTAAGCCAAAAGAAGAATTGGACACCGGAAAGCTTGC
CGGAGCCGCCGCCGACATCCTTGCAGCCGCTTCCCATTACGGCAAACTAGGAGATGATGG
AATCGGTAAGTACATCGGACAAGCCGAGGATTATCTTCATGGATACGAGCTTAAGAATTC
AAAACCCAACAAATCTGGTAGTGGTGCTGGTGCTGATGCTGAATCTGGTAGTGGTACTGG
TGCTGCATCCAAAAAGAGCACTTCTAGTAATGCGGAGCACAAGAACTCATCGGAGTCTCA
CCCACGTGGCAATACAAGAGATGATGATGATCATGATGATGAGCGTAGAGAGCACGCCAC
GAAAGAGAAGAAGATGGCATCAAAGAAACCATCCGGTGACAATCAAAGTCATGATCGTGA
GGAAGTAGGTAGAGGGATGCCTAAGAAACAAGTTGGTGATGATCATTCCGCAGATGAGCA
CACGATGAAAGGTAAAGAAATGCCTCAGAAACAATCCGGTGGTCGTGAACGTTCCAAAGA
AGACGATGATGATCCGAGATCTGGACGTGGTGAAAGTGAAGGAATAGCGAAGAAAAAACC
TGTTGGGCATGGCCATGATGAAGATGATAGTCGCTCTGGAGGGGGTTATGGTGAATACAT
AAAAAAAGCACAAGGATTTCTCAATAAAAAGTCCGACGGTGGTAATGGAAGTCCAAAGGC
CGATGGAGATTCCGGAGGTGGGGTCATGAAAATGGCTCAAGGTTTGTTTAAGAAAGATTC
AGACGACCGTAGCCCCAACAAACACGACGAAGATGGGAACAAAACAGATTATCTCAAGAT
GGCCGGAAGTTTTTTCAAGTAGAGATTATACTGGATACGTTATTATTGTTATCGTAATAA
TAAAAAAGAAGTATAGACTAATTGTAACATAGAATATCATGATCTGTTTTGATCAATTCT
TTTGTTTTCATTTCTTTGCTAAAGTTTGAGTTTTAGCTATAGTTTGATTTGAATTGTAAT
AATGGTAACATGTACAGTGTGGCTATCAGTTGCCATGCAAATACTATTAATGTACTTGTC
AAGTAGTAGAATATATATAATTTTT