Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012390.3.1
CDS Infomation

Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K383_CYNCS)
Sequence

ATGGCGATCCTGATTCGATCACGACCGTTGATCAGAACATTAACAAATTTCAAAACAATC
ACAACCGTTCCTTTCCTCTCACAAGAACCTCAACTCGCCGGGACTCCGCCGGAGAACACT
ACCCCACTACCCCCGAATCCATCCTCCGGTAGCCCACTCTACAATGAAAACTGGAGATCC
CCATTTGCAGCTACCTCACAATCTGTATCTTCTTCCGTTGTACCCTTGGGGTTCTTACGC
CAATCGCCTGCTGCGCGTATGCAGGCAATGTCGGAATCACTTGATGTGGAAGGTTTAATG
AATCTGTTTGCTGATTGGGTAACGACGCAGAGGTGGGAGGATATGAAACAGGTGTTTGAG
CTTTGGATTAGGTCGTTGGATAGAAATGGGAAACCGAATAAGCCTGATGCGAATCTGTTT
AATTATTATTTGAGAGCTAATTTGATGATGGGTGCTACTGCTGATGATTTGTTGGGATTA
GCTAGTCAAATGGAGGAGTATGGACTTGTTGCTAATACTGCTTCGCATAATTTGATCTTG
AAAGCTATGTTTCAATCTGGTGAACCATTGTCATGGGCTGATAAATCTGTCAAATTGCTC
GAAAGGATGATTGCAACTGGAGTTGAGTATAAAGAAGCTTTGCCTGATGAAGAGTCATAT
GATTTGGTTACTGGCTTGCTATTTAAAGCAAACCTTATTGATGATGCGTTGAAATATATT
GATTCAGCCTTAAAATCTGGGTATAAGCTATCCATGAATGTATTTAATGAGTGTGTGCGA
AGCTGTATCTACAGCAACAGGCTGGATGCATTGGTGTCAATAATAGAGAAATGCAAGAAA
ACAGATCAGAACAAAGGCCTGTTGCCGCCTTGGAACATGTGCACACACCTTGCAGATAGT
GCATTACAAGCAGATAATAGTGAACTAGCTTTTACTTCCTTGGAGTTCTTTGTGAAATGG
ATTGTTAGAGGTGAGACTGTGAAGCCCCCTGTTTTACTCAGTGTAGGCGAAGGACTGCTT
GTGGCTGCACTTGGAACTGCTGGTAGAACATACAATGTGAAACTCCTGAATGGTGCTTGG
GAAGTCCTTAAGCGCTCACTACGGCAAATGAGGATCCCTAACCCTGAGTCTTTCCTTGCA
AAGATGTATGCCCATGCATCATTGGGACAATTGCAGAATGCTTTTGCTACCCTGCATGAG
TTTGAGAAAGCTTATGCTAGTTCTAAAGATGAGAGTGCAGAAGAACTATTTTCTCCCTTT
ACCTCTTTGAATCCACTGGCTGTTGCTTGCTGCAGGAATGGTTTTGTCACCCTGGACTCT
GTTTACTATCAGCTGGAGAATTTGAGCCGAGCAGACCCCCCTTTCAAGTCTCTTGCTGCA
CTCAATTGTGTAATTTTAGGCTGTGCCAATATATGGGATATTGATCGTGCTTATCAGACA
TTTGCTGCAATTGAATCCACTTTTGGATTAACCCCAGATATCCATTCATACAATGCGCTG
ATATATGCATTTGGGAAGCTTGGCAAGAGGGATGAAGCCACAAAAGTCTATGAGCACTTT
ATGGATTTAGGAGTGAAGCCAAATGAAATGACATATTCTCTACTTGTTGATGCTCATCTT
ATTAAGCGAGAACCGAAAGCTGCACTTTCAGTAGTTGATGAGATGGTACATGCCCAGTAT
AAACCTTCCAAGGAGATGCTGAAGAAGATCCGAAGACGATGTACTCGAGAGATGGATTAT
GAATCTGATGATCGAGTTGAGGAGTTGACCAAGAAGTTTAACATCCGAATGGGTGCAGAG
AATCGTCGTAACATGCTCTTTAATCTTAGATACAACATGGAATATTCTGGTTAG

Peptide Sequence

PEP ID

Solyc05g012390.3.1
PEP Infomation

Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K383_CYNCS)
Sequence

MAILIRSRPLIRTLTNFKTITTVPFLSQEPQLAGTPPENTTPLPPNPSSGSPLYNENWRS
PFAATSQSVSSSVVPLGFLRQSPAARMQAMSESLDVEGLMNLFADWVTTQRWEDMKQVFE
LWIRSLDRNGKPNKPDANLFNYYLRANLMMGATADDLLGLASQMEEYGLVANTASHNLIL
KAMFQSGEPLSWADKSVKLLERMIATGVEYKEALPDEESYDLVTGLLFKANLIDDALKYI
DSALKSGYKLSMNVFNECVRSCIYSNRLDALVSIIEKCKKTDQNKGLLPPWNMCTHLADS
ALQADNSELAFTSLEFFVKWIVRGETVKPPVLLSVGEGLLVAALGTAGRTYNVKLLNGAW
EVLKRSLRQMRIPNPESFLAKMYAHASLGQLQNAFATLHEFEKAYASSKDESAEELFSPF
TSLNPLAVACCRNGFVTLDSVYYQLENLSRADPPFKSLAALNCVILGCANIWDIDRAYQT
FAAIESTFGLTPDIHSYNALIYAFGKLGKRDEATKVYEHFMDLGVKPNEMTYSLLVDAHL
IKREPKAALSVVDEMVHAQYKPSKEMLKKIRRRCTREMDYESDDRVEELTKKFNIRMGAE
NRRNMLFNLRYNMEYSG*

Transcript Sequence

Transcript ID

Solyc05g012390.3.1
Transcript Infomation

Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K383_CYNCS)
Sequence

CTTCAACATCCTAAAACCCTAGCAAATTATTTCCCCCAAAAAGCTTAAAAACACTTACAA
TGGCGATCCTGATTCGATCACGACCGTTGATCAGAACATTAACAAATTTCAAAACAATCA
CAACCGTTCCTTTCCTCTCACAAGAACCTCAACTCGCCGGGACTCCGCCGGAGAACACTA
CCCCACTACCCCCGAATCCATCCTCCGGTAGCCCACTCTACAATGAAAACTGGAGATCCC
CATTTGCAGCTACCTCACAATCTGTATCTTCTTCCGTTGTACCCTTGGGGTTCTTACGCC
AATCGCCTGCTGCGCGTATGCAGGCAATGTCGGAATCACTTGATGTGGAAGGTTTAATGA
ATCTGTTTGCTGATTGGGTAACGACGCAGAGGTGGGAGGATATGAAACAGGTGTTTGAGC
TTTGGATTAGGTCGTTGGATAGAAATGGGAAACCGAATAAGCCTGATGCGAATCTGTTTA
ATTATTATTTGAGAGCTAATTTGATGATGGGTGCTACTGCTGATGATTTGTTGGGATTAG
CTAGTCAAATGGAGGAGTATGGACTTGTTGCTAATACTGCTTCGCATAATTTGATCTTGA
AAGCTATGTTTCAATCTGGTGAACCATTGTCATGGGCTGATAAATCTGTCAAATTGCTCG
AAAGGATGATTGCAACTGGAGTTGAGTATAAAGAAGCTTTGCCTGATGAAGAGTCATATG
ATTTGGTTACTGGCTTGCTATTTAAAGCAAACCTTATTGATGATGCGTTGAAATATATTG
ATTCAGCCTTAAAATCTGGGTATAAGCTATCCATGAATGTATTTAATGAGTGTGTGCGAA
GCTGTATCTACAGCAACAGGCTGGATGCATTGGTGTCAATAATAGAGAAATGCAAGAAAA
CAGATCAGAACAAAGGCCTGTTGCCGCCTTGGAACATGTGCACACACCTTGCAGATAGTG
CATTACAAGCAGATAATAGTGAACTAGCTTTTACTTCCTTGGAGTTCTTTGTGAAATGGA
TTGTTAGAGGTGAGACTGTGAAGCCCCCTGTTTTACTCAGTGTAGGCGAAGGACTGCTTG
TGGCTGCACTTGGAACTGCTGGTAGAACATACAATGTGAAACTCCTGAATGGTGCTTGGG
AAGTCCTTAAGCGCTCACTACGGCAAATGAGGATCCCTAACCCTGAGTCTTTCCTTGCAA
AGATGTATGCCCATGCATCATTGGGACAATTGCAGAATGCTTTTGCTACCCTGCATGAGT
TTGAGAAAGCTTATGCTAGTTCTAAAGATGAGAGTGCAGAAGAACTATTTTCTCCCTTTA
CCTCTTTGAATCCACTGGCTGTTGCTTGCTGCAGGAATGGTTTTGTCACCCTGGACTCTG
TTTACTATCAGCTGGAGAATTTGAGCCGAGCAGACCCCCCTTTCAAGTCTCTTGCTGCAC
TCAATTGTGTAATTTTAGGCTGTGCCAATATATGGGATATTGATCGTGCTTATCAGACAT
TTGCTGCAATTGAATCCACTTTTGGATTAACCCCAGATATCCATTCATACAATGCGCTGA
TATATGCATTTGGGAAGCTTGGCAAGAGGGATGAAGCCACAAAAGTCTATGAGCACTTTA
TGGATTTAGGAGTGAAGCCAAATGAAATGACATATTCTCTACTTGTTGATGCTCATCTTA
TTAAGCGAGAACCGAAAGCTGCACTTTCAGTAGTTGATGAGATGGTACATGCCCAGTATA
AACCTTCCAAGGAGATGCTGAAGAAGATCCGAAGACGATGTACTCGAGAGATGGATTATG
AATCTGATGATCGAGTTGAGGAGTTGACCAAGAAGTTTAACATCCGAATGGGTGCAGAGA
ATCGTCGTAACATGCTCTTTAATCTTAGATACAACATGGAATATTCTGGTTAGATGTTGC
TGAAGTGGAGTTAGAGGTAGCATGCATAGTCAACACCCGTTCAGAATTTCTCGCCCTTCT
GCTGAGAAACTTGATGGAATGAAATATTAGTATATCAGTGCTTCTAGCATTTGAATGTTA
AAAGACTCTTTTCTCTCTTCTTCTAGCTTGCCTCTGTGCTAGTTGGACAGCTGATGTTGG
CGTTTCGCAAAGTTTAGCAGTGTCACATCTCATATACCTCGGGGCGATCCTCTAACCAGT
GGCTGTAAATTACTTAGTTCTGGTTAGTATTGAGCTGTGGAGGATGGTGTCTGGTTAGAA
GGTTTTTGTTTTAACATATTTATGTATTCTTTTTTCCACCCATTAGGTAGCTTTTAAAGA
CAGGGAATTGCTAATGAAATGAGATGAATCTCATTTTTTGAATAAACTGTACTCTTCATG
CTGAAGCAGTTTGCATCAAGTGCAATTTTCTGCTTTATTCTTGCTTCAGTTTCTTCCATA
GTTGATTACCAATTTTACATG