Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012200.3.1
CDS Infomation

Asparagine synthetase, putative (AHRD V3.3 *** B9REC9_RICCO)
Sequence

ATGTGTGGCATAGCAGTGATTGTGTCTGGAATTAAGATAAGTTTATCATCTTTAGACCCA
AATTTTATCTCTCCAATACCTTTATTGGAACAAAAGACTTTATTTTCAGTGGATGACATA
AAACGGGTGTTAAGAAGAAGGGGTCCAGATAGTTTGGGATGCAAGAAAGTTTTACTTCGT
GCCAGGGTTTCATCTTTACCAGGTGGGGAGCAAGATGTTGTTGCCTTTGTGGAGGATGAA
GATGCGAGTGAAGGAGAGAATTTTCATACGGGCGGTGGCGCTGCTAAAGAATTCATTAGA
GAATTGCAATTTCTTGGTGCTACATTGCAGCTTAGAGGCATAAATCCTATTGTTCAACCA
TTGGTGGACATGTCAGGGAACATCCTTGTTTATAATGGTGAAATATTTGGAGGCATCCAG
ATGAGTAGCGATAACAATGACACTGAAATTTTTATGCAACATCTAGGACTATGTTGTTCT
CATGTTTCCTCTCCGCATAATAAAACTCATACTTCTGGGGATAAGCAAAGTACTGTTCCA
GAACTTCTTTCCAGTATCAAGGGGCCTTGGGCTTTGATTTATTGGCAGAGTAGTTCAAGA
ATATTATGGTTTGGTCGAGATGCATTTGGAAGGCGAAGCCTTCTTGTTCACTGGCCAACA
AAGGAGGACCCTCGGTTTCTGCTGTCTTCTGTATCACCACATGCCTCTGTAAATGAAAGT
TCTGAATTTGCAGATGGAGAGGGAATATCCAAAACAGACTTCTGGGAAGAACTTCCATGC
GGTGTGTACAGTTTGTCTATTGGTGATTTAGGAACAGATGACTATTTAATTGGTGAAGTT
TTGAAGCATGACTGGACAGATCCAAAGCTGAAGGAGTTAATCACTTGGGAGAGAACTTCT
GTCCAACCAAAACCAGAGGACTTGCACGTTTCTCACCAAAAGGTTTATAGCAAGAAAGAG
GACTCGCCTTTAACTCCTTCCATTCTGATGGAATCTAAGTTAGCTTCTACAGACTGCCTA
CTTACATCGCTACCACATAGGGTAATGATTGCTTTACAAGAGTCAATAATGCGACGCACT
GCATTAAATACAATCTATCTGGCCACTTCAGTTGACTACACAAATAAATGCAATGCTCCA
GTTGCCGTGCTCTTTTCTGGTGGATTAGACTCTATGATACTAGCAGCATTACTAGATAAG
TGCATGGATGCCAAATATGAAATTGATCTGCTAAATGTAAGCTTTGACGGTCCATTTGCT
CCTGATAGAATCTCTGCTAGAGCAGGTCTAAAGGAACTACAAAAAGTTGCCCCATCAAGA
AGATGGAAACTTGTAGAGATTGATGCTGATCTGCTTAAGCTGACCTCTGAAACGAAGCAT
GTCATGTCACTAATAAATCCTGCAAGGACCTACATGGATCTGAATATTGGTATTGCTCTG
TGGTTGGCTGCTAGCGGTGACGGTTGTTTGCAAGATGAAACAGGCAACGATGATACCTGT
GTCAGTGTCAAGTACAAATCTGCAGCTCGGATTCTCCTAGTTGGTGCTGGTGCAGATGAA
CAATGTGCTGGATATGGTCGGCATAGGACAAAATATAGAAATGGAAGCTGGTTAGCTCTG
AATGATGAAATGAAACTAGACATGCAGCGGATTTGGAAGAGAAACCTTGGGAGAGATGAT
CGGTGTATTGCCGACAATGGCAAGGAGGCCAGGTTCCCTTTCTTGGATGAGGATGTCATT
AGGATTTTGCTAGATATTCCGTTGTGGGAGATTGCTGACCTTAATCAACCAATTGGTATT
GGTGACAAGAAAATCTTGCGAGAGGTTGCACATTTACTTGGTTTGTCTGAAGCAGCTTCA
CTTCCGAAAAGAGCAATTCAGTTTGGTTCAAGAATTGCAAGAGAATCAAATCGGAAAAAT
TTTGGAAGCAACCGTGCAGCCAATCAAGCATCTGCTGGAAGTGTAACGATACACAGAAAT
AACTCATAA

Peptide Sequence

PEP ID

Solyc05g012200.3.1
PEP Infomation

Asparagine synthetase, putative (AHRD V3.3 *** B9REC9_RICCO)
Sequence

MCGIAVIVSGIKISLSSLDPNFISPIPLLEQKTLFSVDDIKRVLRRRGPDSLGCKKVLLR
ARVSSLPGGEQDVVAFVEDEDASEGENFHTGGGAAKEFIRELQFLGATLQLRGINPIVQP
LVDMSGNILVYNGEIFGGIQMSSDNNDTEIFMQHLGLCCSHVSSPHNKTHTSGDKQSTVP
ELLSSIKGPWALIYWQSSSRILWFGRDAFGRRSLLVHWPTKEDPRFLLSSVSPHASVNES
SEFADGEGISKTDFWEELPCGVYSLSIGDLGTDDYLIGEVLKHDWTDPKLKELITWERTS
VQPKPEDLHVSHQKVYSKKEDSPLTPSILMESKLASTDCLLTSLPHRVMIALQESIMRRT
ALNTIYLATSVDYTNKCNAPVAVLFSGGLDSMILAALLDKCMDAKYEIDLLNVSFDGPFA
PDRISARAGLKELQKVAPSRRWKLVEIDADLLKLTSETKHVMSLINPARTYMDLNIGIAL
WLAASGDGCLQDETGNDDTCVSVKYKSAARILLVGAGADEQCAGYGRHRTKYRNGSWLAL
NDEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRILLDIPLWEIADLNQPIGI
GDKKILREVAHLLGLSEAASLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVTIHRN
NS*

Transcript Sequence

Transcript ID

Solyc05g012200.3.1
Transcript Infomation

Asparagine synthetase, putative (AHRD V3.3 *** B9REC9_RICCO)
Sequence

CGGCCAAGCATACATAATAACGAAACGAAAACATCGAACAAATAAATACAAATCATTACT
TTTATTGTACATAAGCAACAAAAACAGAACATATTTAAAAGTTCAGAGAAAATAAAGTTG
AGTGAGAATCACACACACCTTATTACAATCAAATGGGCACCACATTCTTGAACAACTGCT
CGAACTAAGCTTGTCTACAATTTTAAAAAACTACAAAAGTTAAACCAAACAGCTATTTTT
TCTGAACAGGAAAATCAAACAACTATCTTGAACCCAAAAATCCAGAGGTATGATTTTGAC
ACAAATCCAAATGTCAATTGTAAAATTGATAACACAGGATATGGCTCAAACAAAAATGTC
AATTTTGAGATTCAAAGACATGATTGTGGCTCAAATACAAATGTAAATTTTGAAATTCAA
AGACATTATTGTTGGCTCAAACTCAAATGTCAATTCCAAAATTCAGACGTAATTTTCGGC
TCAAACCCAAATGTCAATTTCCAATTTCAACAATCATGGTTTTGTCTCAAAACCGAAAAG
TCAATTTCAAATTTTAAAAAAAGACATCAAGAATATACATATACTGTACCTTTCCAGTTC
CAGGAGGTCCATATAGCAACAACCCACGTGGCCACTACAGAAAAAATAAGCAAAGCAACT
AGAGTTGTCAATGAAAGATGATAAGCTATATATCAAAGCTACACTATCTGGAAAAACTTT
TAGTACCTTTAGGCCAAGTTTTCGAGATTCAGCAGAGTAAAGAAGAGGATAGGTGATGAG
TTCTCTGAGAACTCGAAGAGCTTCAGCATTACCGGCTATAGCTTCTTCTGCTTTCCACTC
ACCAGCACAGCTGCTACTCCCACTGCTACTTTCCATCTCTCAGAGTATGCTGGAGAGGCC
AATACTTTCCAGCTGTGTGGTTGGTGGGGGTTTACACTTTTGCCTTAACCCCTGTTTGGA
TAACCCCAAAATTCTCAACTTTGGAGCTTCATCCAAAATAGCTCCTAATATATAAAGAAA
AAACTATTAATGTTGTAAGTTCTCAAAAGTTGATGCATATTTAGTTTAGTATAGTTAATA
GAACATCAAAATGAGTCTACAACTTGAGAAATAAACTGCCCCCAACAGAAGCCATTATTC
AACAAGCAGAAAGATTCAAGAAAGTACCCAACATATAATTAGTGGTAGCAAATTTTAAAA
AAAAAACACCAAAAGAATCTTTGAACATTCCAGAAAATACCCAACATATAACTAGTGGTA
ACAAGAATAGGGTTCTGAATAAAAAGTTCTAACCTTGTGAAGAAAATCACTCTGTCAGCA
ATGGCCGCTTTAGTCGTTGAGTGTTCTATTTTAGTTTTCTGAAAAAGGGTTTTAGCCTAA
GTAGAAAAAAATTAAACTTTAAGGGCAATTTTGTCCTTTTAAAAATATTTTGATATTTCA
TAAACCTTTCTTCCTACTTGGTCTTAAAAGTTCTGTTTGTAGGGTTTAAGGAAGCTGCAG
GACAAAGAAAGATGTGTGGCATAGCAGTGATTGTGTCTGGAATTAAGATAAGTTTATCAT
CTTTAGACCCAAATTTTATCTCTCCAATACCTTTATTGGAACAAAAGACTTTATTTTCAG
TGGATGACATAAAACGGGTGTTAAGAAGAAGGGGTCCAGATAGTTTGGGATGCAAGAAAG
TTTTACTTCGTGCCAGGGTTTCATCTTTACCAGGTGGGGAGCAAGATGTTGTTGCCTTTG
TGGAGGATGAAGATGCGAGTGAAGGAGAGAATTTTCATACGGGCGGTGGCGCTGCTAAAG
AATTCATTAGAGAATTGCAATTTCTTGGTGCTACATTGCAGCTTAGAGGCATAAATCCTA
TTGTTCAACCATTGGTGGACATGTCAGGGAACATCCTTGTTTATAATGGTGAAATATTTG
GAGGCATCCAGATGAGTAGCGATAACAATGACACTGAAATTTTTATGCAACATCTAGGAC
TATGTTGTTCTCATGTTTCCTCTCCGCATAATAAAACTCATACTTCTGGGGATAAGCAAA
GTACTGTTCCAGAACTTCTTTCCAGTATCAAGGGGCCTTGGGCTTTGATTTATTGGCAGA
GTAGTTCAAGAATATTATGGTTTGGTCGAGATGCATTTGGAAGGCGAAGCCTTCTTGTTC
ACTGGCCAACAAAGGAGGACCCTCGGTTTCTGCTGTCTTCTGTATCACCACATGCCTCTG
TAAATGAAAGTTCTGAATTTGCAGATGGAGAGGGAATATCCAAAACAGACTTCTGGGAAG
AACTTCCATGCGGTGTGTACAGTTTGTCTATTGGTGATTTAGGAACAGATGACTATTTAA
TTGGTGAAGTTTTGAAGCATGACTGGACAGATCCAAAGCTGAAGGAGTTAATCACTTGGG
AGAGAACTTCTGTCCAACCAAAACCAGAGGACTTGCACGTTTCTCACCAAAAGGTTTATA
GCAAGAAAGAGGACTCGCCTTTAACTCCTTCCATTCTGATGGAATCTAAGTTAGCTTCTA
CAGACTGCCTACTTACATCGCTACCACATAGGGTAATGATTGCTTTACAAGAGTCAATAA
TGCGACGCACTGCATTAAATACAATCTATCTGGCCACTTCAGTTGACTACACAAATAAAT
GCAATGCTCCAGTTGCCGTGCTCTTTTCTGGTGGATTAGACTCTATGATACTAGCAGCAT
TACTAGATAAGTGCATGGATGCCAAATATGAAATTGATCTGCTAAATGTAAGCTTTGACG
GTCCATTTGCTCCTGATAGAATCTCTGCTAGAGCAGGTCTAAAGGAACTACAAAAAGTTG
CCCCATCAAGAAGATGGAAACTTGTAGAGATTGATGCTGATCTGCTTAAGCTGACCTCTG
AAACGAAGCATGTCATGTCACTAATAAATCCTGCAAGGACCTACATGGATCTGAATATTG
GTATTGCTCTGTGGTTGGCTGCTAGCGGTGACGGTTGTTTGCAAGATGAAACAGGCAACG
ATGATACCTGTGTCAGTGTCAAGTACAAATCTGCAGCTCGGATTCTCCTAGTTGGTGCTG
GTGCAGATGAACAATGTGCTGGATATGGTCGGCATAGGACAAAATATAGAAATGGAAGCT
GGTTAGCTCTGAATGATGAAATGAAACTAGACATGCAGCGGATTTGGAAGAGAAACCTTG
GGAGAGATGATCGGTGTATTGCCGACAATGGCAAGGAGGCCAGGTTCCCTTTCTTGGATG
AGGATGTCATTAGGATTTTGCTAGATATTCCGTTGTGGGAGATTGCTGACCTTAATCAAC
CAATTGGTATTGGTGACAAGAAAATCTTGCGAGAGGTTGCACATTTACTTGGTTTGTCTG
AAGCAGCTTCACTTCCGAAAAGAGCAATTCAGTTTGGTTCAAGAATTGCAAGAGAATCAA
ATCGGAAAAATTTTGGAAGCAACCGTGCAGCCAATCAAGCATCTGCTGGAAGTGTAACGA
TACACAGAAATAACTCATAATCTACATATATGTAAACTCCATTCAGGAATCAAGACCACA
AGCAAAGCAAGCGTGGAAAGATAAAAAGGCTCTATGATGATTTGTCCCGCGTATTATTTT
GATGGACGATTTTTGTGAGTCCATGATCGAGATACTATTGTCTGTCTTCATGTTCGATAC
AGTGAATACTTGTCTTGATCTCTTGGTTGAACGATACTCGCGTTTTTTTGGGAGAAAATG
AAGTGGGATTGTTAGTCAATGTTGCTTCTACTAGGTTGTGTTCTTTGTCTTTCAATTTGT
CTATAGGTTCCCTTTATCTGCAGCTGATTGAAAAAATAAAGCACACAACATGGTTGGTGC
TTTTCTGATACACTGGTAACTCACCCATTATGACTGATTTTGGATATTACTACATGTTGT
AATCCTACGAATAGGGTCTGGAGAAGGTAGAGTATGTTGACTTTAGGGATCTTGTGTGAT
GTA