Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012140.3.1
CDS Infomation

Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061GZ24_THECC)
Sequence

ATGGCTACTGGTAACGAAATTGTAAGTTTTACCTATTTGGGGTTAAGTAAAGCTGTTTCT
CCTAAACGATGTCGTTTGGGTATCCCTCAAACTTGGTTGAAATGGAGGAGTAGCTTGGTT
TTGGGTGGGGTGGGTTGTAGTAGTCGAAACCCTAGTTTTGTTAGTCCGAGGAGGAATGGG
TTTAAGTTGTTTAGTTCGGTCGAATTGGGTAGTTTTGTGACGAGTGATGGTGAGGAGAAG
AATGAGATGAGTGATTGTTTTTTCGAGGCGATTGAGGAATTAGAAAGAATGACGAGAGAG
CCATCAGATGTACTTGAGGAAATGAATGAGAGGTTATCTGATAGAGAATTGCAGTTGGTG
TTGGTGTATTTTGCGCAGGAAGGGAGGGATTCGTGGTGTGCGTTGGAGGTGTTTGAGTGG
TTAAGGAAAGAGAATAGAGTCGATAAGGAGACGATGGAGCTTATGGTTTCGATAATGTGT
GGATGGGTGCAGAAGTTGATTGGGTCTAAGAGTGAAGCTGGGGATGTAGTGGACTTGTTG
GTTGATATGGACTGTGTTGGATTGAACCCGAGTTTTAGTATGGTTGAAAAGGTTATATCT
TTGTATTGGGACGCAGGTGAGAGGGAGGGAGCTGTGTCTTTCGTGAAGGAGGTGTTGAGG
AGGCAGATTGCTTACTCAGATGGTAATGTAGATGGGCATAAGGCAGGTCCTGCTGGTTAT
CTTGCTTGGAAGATGATGGAGGAGGGTAATTACAAGGATGCAGTCAAACTAGTTATTGAC
ATTCGGGATTCTGGGTTGAAGCCGGAGTTATACAGCTATTTAATTGCAATGACAGCTGTG
GTAAAAGAGCTGAATGAATTTGGGAAAGCTCTACGCAAATTAAAAGGTTTTGCCAGAACT
GGTCTTGTTGCTGAGCTTGATTTAGAAAATCTTAGGCTTATTGAAGAATATCAAGCAGAT
CTGTTGGCTGAGGGTGTACAGTTGTCCGATTGGTTGATTCAAGAGGGTGGCCCTTCTCTT
TTCGGGGTGGTTCATGAGAGGCTTCTTGCTATGTATGTCTGTGCTGGCCGTGGAATAGAA
GCTGAGAGACATTTGTGGCAAATGAAGATATCTGGCAAGGAAGTCAGCGGAGATCTTCAT
GACATTGTCTTAGCAATATGTGCTTCCCAAAAGGAGCTAGGCCCCATCTCAAGGCTGCTT
ACCGGGATGGAGGCTTCAAGCTCGTTACAGAAAAAGAAAACATTGTCATGGCTGTTAAGA
GGTTACATTAAAGGCGGACACTTAGAGAATGCTGCAGAAACAGTAATTAAGATGCTCGAC
TTGGGTTTATATCCAGATTTTCTGGACCGAGCAGCTGTGCTGCAGAGACTAAGAAGACGA
ATTCAACAATCTGGTAACTTGGAAACGTACCTTAACCTTTGCAAACACCTTTCAGATGCG
AGTCTGATTGGTCCGTGTCTTGTATATCTGTATATAAAGAAATATAGACTCTGGATAATA
AGGACTCTTTGA

Peptide Sequence

PEP ID

Solyc05g012140.3.1
PEP Infomation

Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061GZ24_THECC)
Sequence

MATGNEIVSFTYLGLSKAVSPKRCRLGIPQTWLKWRSSLVLGGVGCSSRNPSFVSPRRNG
FKLFSSVELGSFVTSDGEEKNEMSDCFFEAIEELERMTREPSDVLEEMNERLSDRELQLV
LVYFAQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCGWVQKLIGSKSEAGDVVDLL
VDMDCVGLNPSFSMVEKVISLYWDAGEREGAVSFVKEVLRRQIAYSDGNVDGHKAGPAGY
LAWKMMEEGNYKDAVKLVIDIRDSGLKPELYSYLIAMTAVVKELNEFGKALRKLKGFART
GLVAELDLENLRLIEEYQADLLAEGVQLSDWLIQEGGPSLFGVVHERLLAMYVCAGRGIE
AERHLWQMKISGKEVSGDLHDIVLAICASQKELGPISRLLTGMEASSSLQKKKTLSWLLR
GYIKGGHLENAAETVIKMLDLGLYPDFLDRAAVLQRLRRRIQQSGNLETYLNLCKHLSDA
SLIGPCLVYLYIKKYRLWIIRTL*

Transcript Sequence

Transcript ID

Solyc05g012140.3.1
Transcript Infomation

Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061GZ24_THECC)
Sequence

ATATAACTAATTATAAGGTAACAATCATTCAAACAAAGCCATTAGAAATCTAATGGCACT
TGCTTAAAACATCATCTTCTTTGTTAGCCTCACTTTCCTTTTTCGTTCACCGGCAACACC
GCCGTCCACCGCCGTGTTACATCCTTCCTCAGTTCCCATTTCAGACACCCTTCAGGCTAC
ACCTCACTAAAAGCTCAATCTTTTGCTAAGAAGTTTCATATCTGAATTCTGTTTCAACCG
ATTATCATCTCTTTGAGCAAAGTTAGCTTTTTCTGTTTCTGGGTTTTCTTTGAAAAGATT
GAGATATATGGCTACTGGTAACGAAATTGTAAGTTTTACCTATTTGGGGTTAAGTAAAGC
TGTTTCTCCTAAACGATGTCGTTTGGGTATCCCTCAAACTTGGTTGAAATGGAGGAGTAG
CTTGGTTTTGGGTGGGGTGGGTTGTAGTAGTCGAAACCCTAGTTTTGTTAGTCCGAGGAG
GAATGGGTTTAAGTTGTTTAGTTCGGTCGAATTGGGTAGTTTTGTGACGAGTGATGGTGA
GGAGAAGAATGAGATGAGTGATTGTTTTTTCGAGGCGATTGAGGAATTAGAAAGAATGAC
GAGAGAGCCATCAGATGTACTTGAGGAAATGAATGAGAGGTTATCTGATAGAGAATTGCA
GTTGGTGTTGGTGTATTTTGCGCAGGAAGGGAGGGATTCGTGGTGTGCGTTGGAGGTGTT
TGAGTGGTTAAGGAAAGAGAATAGAGTCGATAAGGAGACGATGGAGCTTATGGTTTCGAT
AATGTGTGGATGGGTGCAGAAGTTGATTGGGTCTAAGAGTGAAGCTGGGGATGTAGTGGA
CTTGTTGGTTGATATGGACTGTGTTGGATTGAACCCGAGTTTTAGTATGGTTGAAAAGGT
TATATCTTTGTATTGGGACGCAGGTGAGAGGGAGGGAGCTGTGTCTTTCGTGAAGGAGGT
GTTGAGGAGGCAGATTGCTTACTCAGATGGTAATGTAGATGGGCATAAGGCAGGTCCTGC
TGGTTATCTTGCTTGGAAGATGATGGAGGAGGGTAATTACAAGGATGCAGTCAAACTAGT
TATTGACATTCGGGATTCTGGGTTGAAGCCGGAGTTATACAGCTATTTAATTGCAATGAC
AGCTGTGGTAAAAGAGCTGAATGAATTTGGGAAAGCTCTACGCAAATTAAAAGGTTTTGC
CAGAACTGGTCTTGTTGCTGAGCTTGATTTAGAAAATCTTAGGCTTATTGAAGAATATCA
AGCAGATCTGTTGGCTGAGGGTGTACAGTTGTCCGATTGGTTGATTCAAGAGGGTGGCCC
TTCTCTTTTCGGGGTGGTTCATGAGAGGCTTCTTGCTATGTATGTCTGTGCTGGCCGTGG
AATAGAAGCTGAGAGACATTTGTGGCAAATGAAGATATCTGGCAAGGAAGTCAGCGGAGA
TCTTCATGACATTGTCTTAGCAATATGTGCTTCCCAAAAGGAGCTAGGCCCCATCTCAAG
GCTGCTTACCGGGATGGAGGCTTCAAGCTCGTTACAGAAAAAGAAAACATTGTCATGGCT
GTTAAGAGGTTACATTAAAGGCGGACACTTAGAGAATGCTGCAGAAACAGTAATTAAGAT
GCTCGACTTGGGTTTATATCCAGATTTTCTGGACCGAGCAGCTGTGCTGCAGAGACTAAG
AAGACGAATTCAACAATCTGGTAACTTGGAAACGTACCTTAACCTTTGCAAACACCTTTC
AGATGCGAGTCTGATTGGTCCGTGTCTTGTATATCTGTATATAAAGAAATATAGACTCTG
GATAATAAGGACTCTTTGA