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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012120.3.1
CDS Infomation

Ribosome maturation factor RimP (AHRD V3.3 *** A0A0B2RDN8_GLYSO)
Sequence

ATGATGATAAGTAGGCTTAGTAGCAAATTCAACTTTTTCTTGCGAAACCCATTTTTCCCT
ACACCTCTCTATCACCATAACCACCGTTTTCTTACAATTCTACAACAAAAACAAGCTCTA
CACCATCTTCCTAATGGTTTACAAAATGGTCCTTTTTTCAAGAATCACATTTCAGTTTTA
CCTCTTCGGTGTTTGAGCATCAATTCTTCTGAAGAAATCATCCCAGAGAGAAATGGAAAC
GACCCACTTCACTATGAAACGATTGAGGACGTAGAACCAATAGATTTATGGGAAGAAGAA
GAGGAAGTTGAGCCTGAGATTGGCGATGGAGGCGATGGAGGAGGAATAGTTTTCCAAAGT
TGCTCTTGGGGTGAGCAGGCATTATCAATTGCTCGTGATGTGCTGCTACCATTTGGTGAT
GACATGGAGCTCTATTCATTTAAAACTAGTCCTCATGGGTACATCTATGTCAGATTAGAC
AAACTTCCAAATAATTTTGGATGTCCAAGTATGGATGAAATGGAAGAATTTAGCCGCCAA
TACAAGAAAAGGTTAGACGAAGCTGGTGCACTAGGGAAAATTCCCGAGGACCTGGCCATT
GAGGTATCATCTCCTGGTGCTGAGCGGCTAATAAAAGTACCAGATGACTTATCCCGCTTC
AAGGATAGGCCTATGAGAGTTATCTATATAGAAGAAATGAACTCTAGAAAGGTTGAAAAG
AATGGAATATTCTTCATGGAATCAATCGATGCAGAATCAGGAAGCTGTGTGTGGAAGTTG
GCGGACGTGAAGGAGAATAGAGATCCAGCATCCAAAGGAAGGCCGCTAAGCCGTAAACAG
AAAGATTGGAGGTTAAAACTGCCTTATGCAATGGTTAAGAAGGTAATTTTGTACCTCAAC
TACTGA

Peptide Sequence

PEP ID

Solyc05g012120.3.1
PEP Infomation

Ribosome maturation factor RimP (AHRD V3.3 *** A0A0B2RDN8_GLYSO)
Sequence

MMISRLSSKFNFFLRNPFFPTPLYHHNHRFLTILQQKQALHHLPNGLQNGPFFKNHISVL
PLRCLSINSSEEIIPERNGNDPLHYETIEDVEPIDLWEEEEEVEPEIGDGGDGGGIVFQS
CSWGEQALSIARDVLLPFGDDMELYSFKTSPHGYIYVRLDKLPNNFGCPSMDEMEEFSRQ
YKKRLDEAGALGKIPEDLAIEVSSPGAERLIKVPDDLSRFKDRPMRVIYIEEMNSRKVEK
NGIFFMESIDAESGSCVWKLADVKENRDPASKGRPLSRKQKDWRLKLPYAMVKKVILYLN
Y*

Transcript Sequence

Transcript ID

Solyc05g012120.3.1
Transcript Infomation

Ribosome maturation factor RimP (AHRD V3.3 *** A0A0B2RDN8_GLYSO)
Sequence

TAACGCAAAATGTGACATACCGAGTATATATTTTGAAAATTTAGCAAGTCATATAAATAG
GAGACAAAAGGGCAAGTGAAAGATAATTAGTACCCAGCCATAACAAAGCCCACAGCTCAG
AAGAAGAAGATGATGATAAGTAGGCTTAGTAGCAAATTCAACTTTTTCTTGCGAAACCCA
TTTTTCCCTACACCTCTCTATCACCATAACCACCGTTTTCTTACAATTCTACAACAAAAA
CAAGCTCTACACCATCTTCCTAATGGTTTACAAAATGGTCCTTTTTTCAAGAATCACATT
TCAGTTTTACCTCTTCGGTGTTTGAGCATCAATTCTTCTGAAGAAATCATCCCAGAGAGA
AATGGAAACGACCCACTTCACTATGAAACGATTGAGGACGTAGAACCAATAGATTTATGG
GAAGAAGAAGAGGAAGTTGAGCCTGAGATTGGCGATGGAGGCGATGGAGGAGGAATAGTT
TTCCAAAGTTGCTCTTGGGGTGAGCAGGCATTATCAATTGCTCGTGATGTGCTGCTACCA
TTTGGTGATGACATGGAGCTCTATTCATTTAAAACTAGTCCTCATGGGTACATCTATGTC
AGATTAGACAAACTTCCAAATAATTTTGGATGTCCAAGTATGGATGAAATGGAAGAATTT
AGCCGCCAATACAAGAAAAGGTTAGACGAAGCTGGTGCACTAGGGAAAATTCCCGAGGAC
CTGGCCATTGAGGTATCATCTCCTGGTGCTGAGCGGCTAATAAAAGTACCAGATGACTTA
TCCCGCTTCAAGGATAGGCCTATGAGAGTTATCTATATAGAAGAAATGAACTCTAGAAAG
GTTGAAAAGAATGGAATATTCTTCATGGAATCAATCGATGCAGAATCAGGAAGCTGTGTG
TGGAAGTTGGCGGACGTGAAGGAGAATAGAGATCCAGCATCCAAAGGAAGGCCGCTAAGC
CGTAAACAGAAAGATTGGAGGTTAAAACTGCCTTATGCAATGGTTAAGAAGGTAATTTTG
TACCTCAACTACTGATTTCTGTCTCATAGTTGTAGGACTCAAGGTACTGATGTATAGACC
TCTGTTGTTACTTATACACCCTTAAAAAAGATGTTGACATAATTTTTTTGTGATATTGAA
GCTTCTAAAGAATTATTTTGTCACAAATTTTTAAATGTGTCAATCTCAAATAAGTTTTGA
GGTTAGCTATATTAGAATGGCACTACATTGCACTAAGCTCTCGTTATGTGTGGAATTTGA
TGGAAACAATCACTCTACCTAC