Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g012040.3.1
CDS Infomation

Squamosa promoter binding protein 6b
Sequence

ATGGAACCTTTGAGCTATGCTTTGGAAGGGAGAGGCCTTATTTTTCCTGATAATGTTGAA
TTGTCTGTCGACACGGTTTCGAGAAATAGAAGTATTGTAAAGGAATGGAATTTGAACCCT
TTTTGTGATGTTGATAAAAGCATTTGTGGTTTTAGTCAAGAAGTAACTGAAAACACAGAG
TTCCTGGGATCGGGTATTGCTGATATTTTGAAGAAATCAGCAGCCAGTAACCCGTGTCCC
GGGGTATTAAGTGGTGAAATGAGTGATGGTTGTGGAAAAATGCTATCTTCAACTTCTATG
TTTAATTCATTTGAGCCTATTCCTGGAGAAGTTGGACTTGGTGCCATGTTTAACAATAGT
GCTACTAAATCTAACAATCCGATGTCATCATTGATTGATTTGAAATTGGAGGAGTTGACT
GATCATGGAGAGTTAAGGACTAATCAATCTTCGAAAGAAAGTTCGATACTTTCTTCTCCA
GAATCTTCATTGGCAGCTGGAAAAGCCCAAACAAAGAGTTCGCATTCTCGGTTTTCTATC
TCTCAGGTTCATGATCAGAAGGAGGAGGAGTCGACGACTGTTTATAGGGAAGTTAAAAGT
AATCAGTCTTTAAAGAGAAACTCGGCTTTGACTTCAGTCAATTCGTCACTGCAGGGAAAA
AGACTACGTACTACGAATTTTCATTCCGAGATTCCTGTCTGCCAGGTTCATGGTTGTAAC
AAGGACCTGAGCTCCTCAAAAGACTATCATAAAAGACACAAAGTATGCAATGAACACTCA
AAAACTGCTATAGTCATAGTTAATGGGATTGAACAAAGGTTTTGTCAGCAGTGTAGCAGG
TTTCACTTGCTAGCAGAATTTGATGAAGGTAAACGCAGCTGTCGCAAACGCCTTGCAGGC
CATAATGAGCGGCGGAGAAAGCCTCAATTCGATACTCACTGGGGTTCGAGATTTTTGGAT
ATGACTTCACAAAGGAGAGTACCATTTCTTTTCCCAGAAATATTTCCTGGTAGCTTCTTT
TATCAAGAAAATTATGAAGATAATAACAACAGCAAGCACCCTAAATTAGAACATAAGCCA
TTTGGCATCTCTCAATTGGCTATATCTGTAAAAAATGAGCAATTCCCTGCGAAAAGCATC
CAGCATCAGTACGGAATGAGAAAACAAGATCCGTCCAAAGTTCACACTGGTGGGACAACA
TTGTCTATTCAAGAATTTTCCAAAGGGCAAAACTCCTCTTGTGCTCTCTCTCTTCTGTCA
GCCCACTCACAAAACCTTCTACACAATTCAACAGACGTTTCACCAACTCTACGTTGGACG
GTTGAACCAAATCATCATGTATACGTTAAAGGGCGTGATCATAATCTTGAGAAATCTCCC
AGAGTTAGTGTTGTAAAAAGCTTGACACCGACTGAGTTATATTCATCTGACGTAGCTGAG
CAAGATGTGGTCGTTCAAGTTCCTGATTGTGAGGCTGTTTCATTTGGAATCCAGAGAGAT
CACGGACATGATCAAAGATCAAACTCTATAAATTCCAAGAACTGTCTTTCTCTGGAAGGT
GGGCCTACCATGGATTTAGTGCAATTGTCTTCGCACCTACAAAGGGTCGAGCAGCAGAAA
AACTCCGTCCAAGTGAAGCAGGAAAATGATATCTTTTGTTCCTTTACTTCCACCTGA

Peptide Sequence

PEP ID

Solyc05g012040.3.1
PEP Infomation

Squamosa promoter binding protein 6b
Sequence

MEPLSYALEGRGLIFPDNVELSVDTVSRNRSIVKEWNLNPFCDVDKSICGFSQEVTENTE
FLGSGIADILKKSAASNPCPGVLSGEMSDGCGKMLSSTSMFNSFEPIPGEVGLGAMFNNS
ATKSNNPMSSLIDLKLEELTDHGELRTNQSSKESSILSSPESSLAAGKAQTKSSHSRFSI
SQVHDQKEEESTTVYREVKSNQSLKRNSALTSVNSSLQGKRLRTTNFHSEIPVCQVHGCN
KDLSSSKDYHKRHKVCNEHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRKRLAG
HNERRRKPQFDTHWGSRFLDMTSQRRVPFLFPEIFPGSFFYQENYEDNNNSKHPKLEHKP
FGISQLAISVKNEQFPAKSIQHQYGMRKQDPSKVHTGGTTLSIQEFSKGQNSSCALSLLS
AHSQNLLHNSTDVSPTLRWTVEPNHHVYVKGRDHNLEKSPRVSVVKSLTPTELYSSDVAE
QDVVVQVPDCEAVSFGIQRDHGHDQRSNSINSKNCLSLEGGPTMDLVQLSSHLQRVEQQK
NSVQVKQENDIFCSFTST*

Transcript Sequence

Transcript ID

Solyc05g012040.3.1
Transcript Infomation

Squamosa promoter binding protein 6b
Sequence

GTTGGAAGTGGAAATTATGTTGACTTAAATGTATTTGGTTTACCAGTGCTTCTTCTCTTC
TCTCCAAGAATAAAAGTGGCAAAGCACCATAGCACCTGTTCTAAGTTCTTTCTAACTTTT
TAGACTCTTCTTCTTGAATTTCAGTTGGATTTGGCTAGTGGTGAAGATTTCATTAAAAAT
TTGCACTTGTTTTAGTTCTGAGAAACTTTTGTTTCTGGATGGAACCTTTGAGCTATGCTT
TGGAAGGGAGAGGCCTTATTTTTCCTGATAATGTTGAATTGTCTGTCGACACGGTTTCGA
GAAATAGAAGTATTGTAAAGGAATGGAATTTGAACCCTTTTTGTGATGTTGATAAAAGCA
TTTGTGGTTTTAGTCAAGAAGTAACTGAAAACACAGAGTTCCTGGGATCGGGTATTGCTG
ATATTTTGAAGAAATCAGCAGCCAGTAACCCGTGTCCCGGGGTATTAAGTGGTGAAATGA
GTGATGGTTGTGGAAAAATGCTATCTTCAACTTCTATGTTTAATTCATTTGAGCCTATTC
CTGGAGAAGTTGGACTTGGTGCCATGTTTAACAATAGTGCTACTAAATCTAACAATCCGA
TGTCATCATTGATTGATTTGAAATTGGAGGAGTTGACTGATCATGGAGAGTTAAGGACTA
ATCAATCTTCGAAAGAAAGTTCGATACTTTCTTCTCCAGAATCTTCATTGGCAGCTGGAA
AAGCCCAAACAAAGAGTTCGCATTCTCGGTTTTCTATCTCTCAGGTTCATGATCAGAAGG
AGGAGGAGTCGACGACTGTTTATAGGGAAGTTAAAAGTAATCAGTCTTTAAAGAGAAACT
CGGCTTTGACTTCAGTCAATTCGTCACTGCAGGGAAAAAGACTACGTACTACGAATTTTC
ATTCCGAGATTCCTGTCTGCCAGGTTCATGGTTGTAACAAGGACCTGAGCTCCTCAAAAG
ACTATCATAAAAGACACAAAGTATGCAATGAACACTCAAAAACTGCTATAGTCATAGTTA
ATGGGATTGAACAAAGGTTTTGTCAGCAGTGTAGCAGGTTTCACTTGCTAGCAGAATTTG
ATGAAGGTAAACGCAGCTGTCGCAAACGCCTTGCAGGCCATAATGAGCGGCGGAGAAAGC
CTCAATTCGATACTCACTGGGGTTCGAGATTTTTGGATATGACTTCACAAAGGAGAGTAC
CATTTCTTTTCCCAGAAATATTTCCTGGTAGCTTCTTTTATCAAGAAAATTATGAAGATA
ATAACAACAGCAAGCACCCTAAATTAGAACATAAGCCATTTGGCATCTCTCAATTGGCTA
TATCTGTAAAAAATGAGCAATTCCCTGCGAAAAGCATCCAGCATCAGTACGGAATGAGAA
AACAAGATCCGTCCAAAGTTCACACTGGTGGGACAACATTGTCTATTCAAGAATTTTCCA
AAGGGCAAAACTCCTCTTGTGCTCTCTCTCTTCTGTCAGCCCACTCACAAAACCTTCTAC
ACAATTCAACAGACGTTTCACCAACTCTACGTTGGACGGTTGAACCAAATCATCATGTAT
ACGTTAAAGGGCGTGATCATAATCTTGAGAAATCTCCCAGAGTTAGTGTTGTAAAAAGCT
TGACACCGACTGAGTTATATTCATCTGACGTAGCTGAGCAAGATGTGGTCGTTCAAGTTC
CTGATTGTGAGGCTGTTTCATTTGGAATCCAGAGAGATCACGGACATGATCAAAGATCAA
ACTCTATAAATTCCAAGAACTGTCTTTCTCTGGAAGGTGGGCCTACCATGGATTTAGTGC
AATTGTCTTCGCACCTACAAAGGGTCGAGCAGCAGAAAAACTCCGTCCAAGTGAAGCAGG
AAAATGATATCTTTTGTTCCTTTACTTCCACCTGA