Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g010650.3.1
CDS Infomation	U box domain-containing protein (AHRD V3.3 - A0A103YA23_CYNCS)
Sequence	ATGGACATGTCTGGCAGTATAGATTCTGATATCATACTGGTTAATAGAGAAAAGGACAGA GTTAGCATACTTGCTGAGTCCTTGTTGTCAAATATATCAGAGTTCATAAAATCAGTAGTT TCAATAGATGTTGAAAAAGAGAATTTCATTGAGATTGGAAGCTACTTATACCGCGTTTCT GCAGTTATAATGGAGTTGCAAATAGGAAAAAATGCAACAACAAATGTCATAGAGAAATTA CAATCTATGTTTGAAAATGTGAATTTAGCTAATGAACTGATCAAGCAATGTCAAAAATAT AGGCAAAAAAATCAGTTGATTGAACCAAGTATTGTCATAGAACAACTTCAAGTTGTGAAC AGACATATCGCCGAAGGATTGAGTCTCATGCCATCTTGTTTTTATGGGGAACAAGAATGT GCAGAAATCGCGGTTAAGTCTCTATTGAAAGATATGAAAGGTGCAGCTGCAATAGTAGCA AGAAAAAATCTGGTTTCGGAGCAGACAGAGTTGGAAGTTAAGATGTTGCATTCAAGGGAA TCAATGACTAATGAAACAGCAGAAACAGAAACAGAAACGGATCTTTACTCTATCGATATT GAAGTTTCCATGGAGAATCTTCGACTAACTGATTCAACAAATCTTTATGTAAGTGATAAT TCGAGAAGCAGTATCAGCGGAGGCTTTCATTTCCAGAATCATGGGAACCGGAGTCCTGTT TCTTTAACAAATTTGCCACGGATGTCTGAGTCTGAATACATGGAACCTCTATACGAAACA TTCTTTTGTCCTTTAACAAAGAAGATTATGGAGGATCCTGTCACAATAGAAAGTGGAGTA ACATATGAGAGGGACGCGATATCAGAATGGATTAACAAGTCTGATAATAACCGCGAAGAA ATAATATGTCCAAAGTCAGGCCAGAAGCTAAAGAGTAGAAATCTGAGCACTAATGTGGCA TTGAAAGCAACGATAAACGAATGGAAAGAGAGAAATGAAACAGCAAGGATCAAGGCTGCA AGGGCAGCATTGTCTTCAGCTACGACACAGGATATAATACTCAAAGCAATCGAAGATTTG AACAGCATTTGCCTCAGAAAACCGTATAATAAGGTACAAGTTCGTAGCATTGGTGTAATA CCACTGCTTGGGAATTTACTGGATAACAGAAACAGAACTATAAGATATGCAACGTTGGAA TTACTGCGATATTTAGCTGAAGATGATGATGAGGAAGTAATTGCTCAAACTATCGATATT GCTACAGTCACAAGGATGCTGTCAAGTAATCACGGGCCTATTAGACATGCATCACTTCGA CTTTTGATTGAGCTATCGAAATCCCAGTTTCTGTGTTATAATGTTGGGGCGGTTCCTGGA GCCATCCTCATGCTGATTACAGCCAAATACAGACATACCGATGATGCATTCATTGCAGAT AAAGCTGATGAAGTCTTGAAAAGTTTGGAGAAATATCCTAGCAACATCAAACACATGGCT GAAAATGGATATCTCGAGCCACTTTTAAATCATCTCCTCGAAGGGAGTGAAGAGATGAAA ATGGAGATGGCACATTACCTCGGGGAAATCGTGCTTGGACCTGACAACGTAATCTATGTT GCTGAACGAGTTTCTCCGATTTTGATCAAAATGGTAGAGAGTGGAAATACTTTGAGCAGG AATGCAGCCTTTGTAGCTCTACAACAAATTTCTTCTCACCATCCAAATGCTAACACACTT GTGCAAGCTGGCCTTGTCCAAATCATGATTGAAGAGATTATCACTCGAACAATGATTCAT GATGAGCCAATGAACTCGAAGAAAGAAGCAGCTGGTATACTTGCAAATGTGCTCGAGTCA GGATTAGATCTAGAGAATCTTCAAGTCAACGAGCGTGGCCACACATTGGCTTCTGATTAC ATTATATTCAACTTCATCCAGAGGATCAAGAATTCAACCCCTGAAGAAATGAATTTTCAC CTTGTTAGAATCTTGATATGCCTTATGAAGTATCCCAAAGCCTCGTCTACCGTTACCTCT GTGATCAAAGAAACAGATGCTAGCTACAATCTAATCGAGCTCATCAATAACCCTGACGAA GAACTCAGCATTGCAGCACTTAAGCTTCTTATCACTCTATCTCCTTTCATGGGACACACA ATTTCAGACAGATTATGCAAAACCAAAGGACAACCCGAGAGCCTAATTCACAATCCATCT GAAAGTCCTCTAATCACAGAAAAGCAAGCAGTCTCCGCAACTCTTCTTGCAAAGCTTCCC CACCAAAACATGACACTCAACCTAGCATTGGTCAATAAGAACACAATTCCTACAATCATA GAACAAATCAACAAAATCCATGTCAGTGGGACAAGAACAAGCAGGTACACAAGTGCATAT TTTGATGGTCTAGTAGGAGCTCTTGTCAGATTGACAACAACACTCTACGATCATCAAATC CTGCACGTAGTAAGAACGTTCAACTTCACATACATATTCACAGAGTTACTCGTGAAAACA TCAAGCGATGAAGTCCAAAAGTTATCCGCGATTGGTCTAGGTAACTTATCAAATCAATCA GTCAACTTATCAAAACCACCACCAATCAAGAGCAACAAGTACATTAAATCTAATCTACTA AGAAGATGTATGTCTCTGCGTTCAAAGTCCGAAAAAGTACCATTATGCTCAGTCCACCGA GGCGTTTGTTCTGCTGAAGACAGCTTCTGCTTAATCGATGCTAAGGCAGTTGAAAGGCTA CTGTCCTGTTTACACCATGACAATGTGGAGGTAGTTGAAGCAGCATTATCAGCTATATCG ACTTTACTAGACGATAAAGTCGATATAGACAAGAGTGTTAAGTTACTGATTGAGATGCAA ACCATTCAACATGTACTAAATGTGGTGAAGGAACACAGAGGAAATGTCTTGTGGCACAAA TCATTTTGGCTAATTGAGAAGTTTCTATCAAAAGGTGGGGACAAATCTGTTTCTGATATA TCACAAGACAGGTTGTTCCCTGCTACTGTAGTTAGTGCATTTCAACATGGTGATGTTTGT ACAAGGGAAATGGCTGAGAAAATCTTGATGCATTTGAACAAAATGCCACATTTTGCTAAC ACAGCTAGTTTTACCTTGTAA

Peptide Sequence

PEP ID	Solyc05g010650.3.1
PEP Infomation	U box domain-containing protein (AHRD V3.3 - A0A103YA23_CYNCS)
Sequence	MDMSGSIDSDIILVNREKDRVSILAESLLSNISEFIKSVVSIDVEKENFIEIGSYLYRVS AVIMELQIGKNATTNVIEKLQSMFENVNLANELIKQCQKYRQKNQLIEPSIVIEQLQVVN RHIAEGLSLMPSCFYGEQECAEIAVKSLLKDMKGAAAIVARKNLVSEQTELEVKMLHSRE SMTNETAETETETDLYSIDIEVSMENLRLTDSTNLYVSDNSRSSISGGFHFQNHGNRSPV SLTNLPRMSESEYMEPLYETFFCPLTKKIMEDPVTIESGVTYERDAISEWINKSDNNREE IICPKSGQKLKSRNLSTNVALKATINEWKERNETARIKAARAALSSATTQDIILKAIEDL NSICLRKPYNKVQVRSIGVIPLLGNLLDNRNRTIRYATLELLRYLAEDDDEEVIAQTIDI ATVTRMLSSNHGPIRHASLRLLIELSKSQFLCYNVGAVPGAILMLITAKYRHTDDAFIAD KADEVLKSLEKYPSNIKHMAENGYLEPLLNHLLEGSEEMKMEMAHYLGEIVLGPDNVIYV AERVSPILIKMVESGNTLSRNAAFVALQQISSHHPNANTLVQAGLVQIMIEEIITRTMIH DEPMNSKKEAAGILANVLESGLDLENLQVNERGHTLASDYIIFNFIQRIKNSTPEEMNFH LVRILICLMKYPKASSTVTSVIKETDASYNLIELINNPDEELSIAALKLLITLSPFMGHT ISDRLCKTKGQPESLIHNPSESPLITEKQAVSATLLAKLPHQNMTLNLALVNKNTIPTII EQINKIHVSGTRTSRYTSAYFDGLVGALVRLTTTLYDHQILHVVRTFNFTYIFTELLVKT SSDEVQKLSAIGLGNLSNQSVNLSKPPPIKSNKYIKSNLLRRCMSLRSKSEKVPLCSVHR GVCSAEDSFCLIDAKAVERLLSCLHHDNVEVVEAALSAISTLLDDKVDIDKSVKLLIEMQ TIQHVLNVVKEHRGNVLWHKSFWLIEKFLSKGGDKSVSDISQDRLFPATVVSAFQHGDVC TREMAEKILMHLNKMPHFANTASFTL*

Transcript Sequence

Transcript ID	Solyc05g010650.3.1
Transcript Infomation	U box domain-containing protein (AHRD V3.3 - A0A103YA23_CYNCS)
Sequence	AAAAAAAGTATACACATAAATCAAATGAAATTTTGTAATATTCAATCAAAAGGGTTTAGA TGAACTCCCCCTGCTCTCTCGCTATCAGTTAAAGCTACATAAGTTATACCGTCAGTATAT ATAACACACATAAACCCAAGATAAAATGAGGCAACTCATTGACTAGACTTTGTTGGATGA ACAACTTCATCAAAACTTCTAAATCAACTATCACTTCATATTTAATATTCCCCCTTAGCT TGTTGTAGACATAAAAGTCAGTGAAAAGAAATTAAAAAGGAAAGAAATTTATGATATCAA AAAAGGACATTCAGGTACGCTAAATATTCTACATTCACGTAGGGTTTCGAGAAGAATCAC ATCTTTAAGTAATGTAATATATTATCAATGACTGATTTTACCTCTCGAATTTATGTATCA AATTTATGATAAAAAGACACAAAATTTTATTCTCAAACATTTTCTTATACTATAAATAAA AGTGGCAACCATGATAAGATAACAAAAGGCATAATATCTTATGTTGAATTGATCAAAAAT GATGCAACTCTCTACCTACTCAATATCTACATGACAACTCCATAGAAATTGAAGTCCAAT AGAAAAGTTCTTTCTTCTTCTCTTTTACATTTCTTTTCTTGATTTCCCCCTTTTATTGGA CTATATTAATTGTTTTTTAAATAAAAAATAAAAAAAAAAATTGATGATCCTACTTGCTCA AATACTAAAGTCAAATATCTAAGTAAATTAAAATAAAACTAAAGGAAGTATTTACTAAAC ATCTTGTCTTAGTACATATGAGTTATGACTGAGTCTTAATCTGACTATTAATTTCTTCTT TAATTTCAAACTACCTACCTAAGCAAAAAAAATTAAAAAAACACAAATTGACATAAGAAA TTTTAGTAGATAATAGTTGTTAACATGAAAAAGAAATTTTATTTTTTTTTGTGTAGAAAT GACTAATTCAGATCATCCCTTAAAATGTCTTCTTCATGATTTTGGAGAATTACCATATAA CACACTTCCCTATCAATGTATTTTTACCTCCCACAGCTTCGACAGATCGCTTAGCCCAAC GTTCAATCAGTGAACTATTACGCACTCTTTCATTATAGTTTAGCCACTGTGGATATGGAC ATGTCTGGCAGTATAGATTCTGATATCATACTGGTTAATAGAGAAAAGGACAGAGTTAGC ATACTTGCTGAGTCCTTGTTGTCAAATATATCAGAGTTCATAAAATCAGTAGTTTCAATA GATGTTGAAAAAGAGAATTTCATTGAGATTGGAAGCTACTTATACCGCGTTTCTGCAGTT ATAATGGAGTTGCAAATAGGAAAAAATGCAACAACAAATGTCATAGAGAAATTACAATCT ATGTTTGAAAATGTGAATTTAGCTAATGAACTGATCAAGCAATGTCAAAAATATAGGCAA AAAAATCAGTTGATTGAACCAAGTATTGTCATAGAACAACTTCAAGTTGTGAACAGACAT ATCGCCGAAGGATTGAGTCTCATGCCATCTTGTTTTTATGGGGAACAAGAATGTGCAGAA ATCGCGGTTAAGTCTCTATTGAAAGATATGAAAGGTGCAGCTGCAATAGTAGCAAGAAAA AATCTGGTTTCGGAGCAGACAGAGTTGGAAGTTAAGATGTTGCATTCAAGGGAATCAATG ACTAATGAAACAGCAGAAACAGAAACAGAAACGGATCTTTACTCTATCGATATTGAAGTT TCCATGGAGAATCTTCGACTAACTGATTCAACAAATCTTTATGTAAGTGATAATTCGAGA AGCAGTATCAGCGGAGGCTTTCATTTCCAGAATCATGGGAACCGGAGTCCTGTTTCTTTA ACAAATTTGCCACGGATGTCTGAGTCTGAATACATGGAACCTCTATACGAAACATTCTTT TGTCCTTTAACAAAGAAGATTATGGAGGATCCTGTCACAATAGAAAGTGGAGTAACATAT GAGAGGGACGCGATATCAGAATGGATTAACAAGTCTGATAATAACCGCGAAGAAATAATA TGTCCAAAGTCAGGCCAGAAGCTAAAGAGTAGAAATCTGAGCACTAATGTGGCATTGAAA GCAACGATAAACGAATGGAAAGAGAGAAATGAAACAGCAAGGATCAAGGCTGCAAGGGCA GCATTGTCTTCAGCTACGACACAGGATATAATACTCAAAGCAATCGAAGATTTGAACAGC ATTTGCCTCAGAAAACCGTATAATAAGGTACAAGTTCGTAGCATTGGTGTAATACCACTG CTTGGGAATTTACTGGATAACAGAAACAGAACTATAAGATATGCAACGTTGGAATTACTG CGATATTTAGCTGAAGATGATGATGAGGAAGTAATTGCTCAAACTATCGATATTGCTACA GTCACAAGGATGCTGTCAAGTAATCACGGGCCTATTAGACATGCATCACTTCGACTTTTG ATTGAGCTATCGAAATCCCAGTTTCTGTGTTATAATGTTGGGGCGGTTCCTGGAGCCATC CTCATGCTGATTACAGCCAAATACAGACATACCGATGATGCATTCATTGCAGATAAAGCT GATGAAGTCTTGAAAAGTTTGGAGAAATATCCTAGCAACATCAAACACATGGCTGAAAAT GGATATCTCGAGCCACTTTTAAATCATCTCCTCGAAGGGAGTGAAGAGATGAAAATGGAG ATGGCACATTACCTCGGGGAAATCGTGCTTGGACCTGACAACGTAATCTATGTTGCTGAA CGAGTTTCTCCGATTTTGATCAAAATGGTAGAGAGTGGAAATACTTTGAGCAGGAATGCA GCCTTTGTAGCTCTACAACAAATTTCTTCTCACCATCCAAATGCTAACACACTTGTGCAA GCTGGCCTTGTCCAAATCATGATTGAAGAGATTATCACTCGAACAATGATTCATGATGAG CCAATGAACTCGAAGAAAGAAGCAGCTGGTATACTTGCAAATGTGCTCGAGTCAGGATTA GATCTAGAGAATCTTCAAGTCAACGAGCGTGGCCACACATTGGCTTCTGATTACATTATA TTCAACTTCATCCAGAGGATCAAGAATTCAACCCCTGAAGAAATGAATTTTCACCTTGTT AGAATCTTGATATGCCTTATGAAGTATCCCAAAGCCTCGTCTACCGTTACCTCTGTGATC AAAGAAACAGATGCTAGCTACAATCTAATCGAGCTCATCAATAACCCTGACGAAGAACTC AGCATTGCAGCACTTAAGCTTCTTATCACTCTATCTCCTTTCATGGGACACACAATTTCA GACAGATTATGCAAAACCAAAGGACAACCCGAGAGCCTAATTCACAATCCATCTGAAAGT CCTCTAATCACAGAAAAGCAAGCAGTCTCCGCAACTCTTCTTGCAAAGCTTCCCCACCAA AACATGACACTCAACCTAGCATTGGTCAATAAGAACACAATTCCTACAATCATAGAACAA ATCAACAAAATCCATGTCAGTGGGACAAGAACAAGCAGGTACACAAGTGCATATTTTGAT GGTCTAGTAGGAGCTCTTGTCAGATTGACAACAACACTCTACGATCATCAAATCCTGCAC GTAGTAAGAACGTTCAACTTCACATACATATTCACAGAGTTACTCGTGAAAACATCAAGC GATGAAGTCCAAAAGTTATCCGCGATTGGTCTAGGTAACTTATCAAATCAATCAGTCAAC TTATCAAAACCACCACCAATCAAGAGCAACAAGTACATTAAATCTAATCTACTAAGAAGA TGTATGTCTCTGCGTTCAAAGTCCGAAAAAGTACCATTATGCTCAGTCCACCGAGGCGTT TGTTCTGCTGAAGACAGCTTCTGCTTAATCGATGCTAAGGCAGTTGAAAGGCTACTGTCC TGTTTACACCATGACAATGTGGAGGTAGTTGAAGCAGCATTATCAGCTATATCGACTTTA CTAGACGATAAAGTCGATATAGACAAGAGTGTTAAGTTACTGATTGAGATGCAAACCATT CAACATGTACTAAATGTGGTGAAGGAACACAGAGGAAATGTCTTGTGGCACAAATCATTT TGGCTAATTGAGAAGTTTCTATCAAAAGGTGGGGACAAATCTGTTTCTGATATATCACAA GACAGGTTGTTCCCTGCTACTGTAGTTAGTGCATTTCAACATGGTGATGTTTGTACAAGG GAAATGGCTGAGAAAATCTTGATGCATTTGAACAAAATGCCACATTTTGCTAACACAGCT AGTTTTACCTTGTAATAATGTATAGAGGTCTTTGAATTAAACAGACACAAAGATCCCCAT CATTGTTCGTAAACGAACATGACTATTCTAATAGTCATGATGATCTCTTTAAGTTTCTAT AAATATAAGGACGGTCCCCTGAAGTAGCGTAAGAAAAAGCTACAAGTATACACACAACTA GTTTTACCTTGTAATAAGTACAGATGTCTTGAATTAAACAGACACAACGATCACGATCAT TGTTCGTGAACAAACATGACTATTCTGAATAGTCATGATGATCTCTTTAAGTTTCTATAA ATATAAGGACGGTCCCCTGAAGTAGCGTAAGAAAAATCTTTAAGTATAAGGTCGTGCTTT TTTTTATCCCCAAGGCAATTACTTTTATTTTCCCCTACTCATAGCTCTTTCTACTTCGAT TATCTTTTCCTATACCGCTAACGAAAAATCAAGTTG