Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g010590.3.1
CDS Infomation	WPP domain-interacting tail-anchored protein 1 (AHRD V3.3 *** A0A1D1YXK4_9ARAE)
Sequence	ATGGCAATTGAAGAATTGGCTGTCCGTACTTCTGATATTGTCAATCCACAAGTAATGGAA ACATTGTTGATTGAAAATCACTCAAGTGAAGCCAAGGACATGGAAGAGATGAGGAGTTCC ATGGAAATATTGAGTAGAGTAGATTTGGACCTTGCGTATTCTGATGAGAAGTTGACGAAT CTTGACAATCTCTTGATGCGTGTCTTGGCCTGCGAAAATGAAGTTGAAGCAATATCTTTC GAGAATGATGAGATTTCTCCTGAATCGATTGAGAAAGTTCTGTCGTTGGATCACTTATCT ATCATTTTGAACTCTGAGATAAGACAACTGGACAATTTCTTAGGCACTCTTCAAGACTTA GTCATTGAAGCAAGGCAAAAGATACCTACGCGCAGAGAATTTAGTGAGCTGCATGTGATA ATGGAGAACAAATTTCATGACACTGAAGAGTTATTGAGAATATCGAAGGAACGTGTCCTA GAAATGAAGATGCAGCTTGCCAAATTGCAGATGACCTCGCTAGCTTTCGACCAAAATGAA TGGAGACATAGGATGAGTTTGGATTTATCAGATATTAATAATGTTTCAGCAAGAGAATTG AAGCCACACGCACAGACAGTTGAGCAAAGACGTATATTAAGAATGTTGGAAAAATCTCTC GAAAGAGAGCTGGATCTTGAGAAGAAGTTGACTTTACATAAACAAAATGAAGATGATCTA AAGTTGAAGCTCCGGTTAACCGAGCAAGTAGCTCTGTGCATGGAAGAGGGTGCAGAGGTT ATATGGGGTAGGTTTTTAGAGTCGGAAAATGCAGCAGAGGTACTTATGGGAATTTCCAGA GAGATGGTGAGCCGATTACAGGTTGTTAACTTCAATTTGAACGGTTCACTTCAACGAGAG AAAGATTTCACATTGAAGATTGATAATTGCATAGGACAGATAAATGCTAAAGATATTACC ATACAAAACCTTAATAGCAACAACAAACATCTTGCTGTTGAAAATACTGAAGTATCCTCG TTAAGGGACAAGCTAAAACTTTCAGAAGATAAGTTGAAAGAATCTGAGTCTAAGTTGCTG AAAGCAAATGAACTGAATGAAGTAAGCGAAGAGCGTCTTAAAGAACTGGAATGTATTGTA GAATCTCAGAAAGAAGACATCGATATTGCAGAACATAAGGCTGACAATGCAGAGGAAAAG GTTGCACATTTGACGGAGACAAACTTGGAACTGCACGAAGAGTTGGATTTTCTCAAGAGT AGTAATGAAAGTAATGCTAAAAAGGTCAGCATTCTCGAGAAGAAGGTCAGGGAATTAGAA CTTCAGCTACAAAATGCTAAGACATCATCCGAAGCAGGTCAAGAACAACAGAATATGTTG TATACTGCCATTTGGGATATGGAAACTTTAATCGATGAACTAAAACAAAAGGTCTTAAAA GCCGAAAGCAAGACTGAACATGTCGAGGAACAGTGCCTTATTTTGTCGGAAACTAATTTA GAACTTACCCAAGAAGTAGAGTTTCTAAGATCAAGAGTCGAAGGATTGGAGACTTCTTTG AATCAAGCTACCGTTGAGAAACTTGCTAGTGCAAAAGACATTAACATCAAAACCAGTTTT ATAATGGATTTGGTCATGCAGCTGGCTATCGAAAGAGAACGAGTACAAAAACAGATTTTT TGTTTGGCCAAGGAAAACAAATCATTGATCAGCAAGTTGAAGTCAACGAAGGAGCAACCG TCCATAAATGTACTTGAGAATGGAGGTGATGATATTGGGTTGTCATCTTCTAGATTTGCC TCAACAATCGCTGCTGCTACAGACAGCTACCGTGAACTGCAAACAGAATCCTCACAGAGA AGCTCCCAGGTGATCAACGAGTTACCTCATGATAAACCGACTGATCGAAGCAGTAAGTCC TCCATTTTGACAAATGAAGAGCCTAACATAGTTGTCAAGTCAGAGGATACCGAGGCTCAG TTTCTAGCAAAGCAACATCAACACAGGTACATTGTCATGGCAATCCTCGTCTTATTACTT TCGACATTAGGATTATATTTTTTTGACAAAAGAAACGACATCCTCGAGTGGTTGATGGTT AGATTATAG

Peptide Sequence

PEP ID	Solyc05g010590.3.1
PEP Infomation	WPP domain-interacting tail-anchored protein 1 (AHRD V3.3 *** A0A1D1YXK4_9ARAE)
Sequence	MAIEELAVRTSDIVNPQVMETLLIENHSSEAKDMEEMRSSMEILSRVDLDLAYSDEKLTN LDNLLMRVLACENEVEAISFENDEISPESIEKVLSLDHLSIILNSEIRQLDNFLGTLQDL VIEARQKIPTRREFSELHVIMENKFHDTEELLRISKERVLEMKMQLAKLQMTSLAFDQNE WRHRMSLDLSDINNVSARELKPHAQTVEQRRILRMLEKSLERELDLEKKLTLHKQNEDDL KLKLRLTEQVALCMEEGAEVIWGRFLESENAAEVLMGISREMVSRLQVVNFNLNGSLQRE KDFTLKIDNCIGQINAKDITIQNLNSNNKHLAVENTEVSSLRDKLKLSEDKLKESESKLL KANELNEVSEERLKELECIVESQKEDIDIAEHKADNAEEKVAHLTETNLELHEELDFLKS SNESNAKKVSILEKKVRELELQLQNAKTSSEAGQEQQNMLYTAIWDMETLIDELKQKVLK AESKTEHVEEQCLILSETNLELTQEVEFLRSRVEGLETSLNQATVEKLASAKDINIKTSF IMDLVMQLAIERERVQKQIFCLAKENKSLISKLKSTKEQPSINVLENGGDDIGLSSSRFA STIAAATDSYRELQTESSQRSSQVINELPHDKPTDRSSKSSILTNEEPNIVVKSEDTEAQ FLAKQHQHRYIVMAILVLLLSTLGLYFFDKRNDILEWLMVRL*

Transcript Sequence

Transcript ID	Solyc05g010590.3.1
Transcript Infomation	WPP domain-interacting tail-anchored protein 1 (AHRD V3.3 *** A0A1D1YXK4_9ARAE)
Sequence	ATTTTTTCAGTATGAATAAAATCCCAATTTTTTGATAAAAAAAAAGTAAATTTCTAAATT AGTCCACCTCCTATTTTTCTAAAAAAATTAGAAATAACAATTTAGGTAAGTTTGAATGCA ATGAATCAAATATCTATAAAGAAAAAAAGTATAGGTACTAAATAATTCCATTTATTATGC TCTTAATTGCAAACTAAATGAGTCCTATAATTAGAAGTAATTGACAACATTTTAGTCACC ATCAAAGGTTCTAGTCAATATTAGAATAGTAAATGCTCTTTTTTTTCTTAATTAGAAATT TTGAAATGATACTCTGAATATTGAAAAATAATTTTTTACTTTTTATCTCGAGTCTAATTG AGTCAAACCTCATAGAAAATATCAAATATCGAAATGAGACAAAAAAAAAATCATCTTAGC CTTAATTTTAGCATTATTATTTTATATGTTATGATTGTTTGGACCCCAATAGTCTAATCC TCAATTATTAAGTTTTTGGTATCAAAACAACTATACCCCCACCACCACTTACCCAACGTG CGCTCCTCCAACAATTATTTCATTTTCCACTCAAATTTCTCCTTTTTTTTTCCTTTCCAT TTTCAAAAAAAAAAAAAAACTTCTCCAAAATCAAGAAATCTCAAATTGCAGAGGATGAAC ATTAATGTTTATGGTTTCATTCTTGTGACCAATAATTAATGAAGGTCATTAGATTTTGTC TCTTTTTTGGTATGGTTGCTGACGTGGGGTAATGTGATTGGTTGGTCTGACTGTTGTGGG ACCCACGTTAGTAACATTTTAGACACCAACCCCATAAGCCTAAAAATATCTCAAAGGTTG ACCCTTTTGTAGATCACAAATATTCTTTGCCACTCTATTCAAGTTATTGTTATGAGAATA AGAGCCATTTTTTATCTTTCATGTTATTAAGCTGCCTTATCAGAAGTGCTGATCAATGGC AATTGAAGAATTGGCTGTCCGTACTTCTGATATTGTCAATCCACAAGTAATGGAAACATT GTTGATTGAAAATCACTCAAGTGAAGCCAAGGACATGGAAGAGATGAGGAGTTCCATGGA AATATTGAGTAGAGTAGATTTGGACCTTGCGTATTCTGATGAGAAGTTGACGAATCTTGA CAATCTCTTGATGCGTGTCTTGGCCTGCGAAAATGAAGTTGAAGCAATATCTTTCGAGAA TGATGAGATTTCTCCTGAATCGATTGAGAAAGTTCTGTCGTTGGATCACTTATCTATCAT TTTGAACTCTGAGATAAGACAACTGGACAATTTCTTAGGCACTCTTCAAGACTTAGTCAT TGAAGCAAGGCAAAAGATACCTACGCGCAGAGAATTTAGTGAGCTGCATGTGATAATGGA GAACAAATTTCATGACACTGAAGAGTTATTGAGAATATCGAAGGAACGTGTCCTAGAAAT GAAGATGCAGCTTGCCAAATTGCAGATGACCTCGCTAGCTTTCGACCAAAATGAATGGAG ACATAGGATGAGTTTGGATTTATCAGATATTAATAATGTTTCAGCAAGAGAATTGAAGCC ACACGCACAGACAGTTGAGCAAAGACGTATATTAAGAATGTTGGAAAAATCTCTCGAAAG AGAGCTGGATCTTGAGAAGAAGTTGACTTTACATAAACAAAATGAAGATGATCTAAAGTT GAAGCTCCGGTTAACCGAGCAAGTAGCTCTGTGCATGGAAGAGGGTGCAGAGGTTATATG GGGTAGGTTTTTAGAGTCGGAAAATGCAGCAGAGGTACTTATGGGAATTTCCAGAGAGAT GGTGAGCCGATTACAGGTTGTTAACTTCAATTTGAACGGTTCACTTCAACGAGAGAAAGA TTTCACATTGAAGATTGATAATTGCATAGGACAGATAAATGCTAAAGATATTACCATACA AAACCTTAATAGCAACAACAAACATCTTGCTGTTGAAAATACTGAAGTATCCTCGTTAAG GGACAAGCTAAAACTTTCAGAAGATAAGTTGAAAGAATCTGAGTCTAAGTTGCTGAAAGC AAATGAACTGAATGAAGTAAGCGAAGAGCGTCTTAAAGAACTGGAATGTATTGTAGAATC TCAGAAAGAAGACATCGATATTGCAGAACATAAGGCTGACAATGCAGAGGAAAAGGTTGC ACATTTGACGGAGACAAACTTGGAACTGCACGAAGAGTTGGATTTTCTCAAGAGTAGTAA TGAAAGTAATGCTAAAAAGGTCAGCATTCTCGAGAAGAAGGTCAGGGAATTAGAACTTCA GCTACAAAATGCTAAGACATCATCCGAAGCAGGTCAAGAACAACAGAATATGTTGTATAC TGCCATTTGGGATATGGAAACTTTAATCGATGAACTAAAACAAAAGGTCTTAAAAGCCGA AAGCAAGACTGAACATGTCGAGGAACAGTGCCTTATTTTGTCGGAAACTAATTTAGAACT TACCCAAGAAGTAGAGTTTCTAAGATCAAGAGTCGAAGGATTGGAGACTTCTTTGAATCA AGCTACCGTTGAGAAACTTGCTAGTGCAAAAGACATTAACATCAAAACCAGTTTTATAAT GGATTTGGTCATGCAGCTGGCTATCGAAAGAGAACGAGTACAAAAACAGATTTTTTGTTT GGCCAAGGAAAACAAATCATTGATCAGCAAGTTGAAGTCAACGAAGGAGCAACCGTCCAT AAATGTACTTGAGAATGGAGGTGATGATATTGGGTTGTCATCTTCTAGATTTGCCTCAAC AATCGCTGCTGCTACAGACAGCTACCGTGAACTGCAAACAGAATCCTCACAGAGAAGCTC CCAGGTGATCAACGAGTTACCTCATGATAAACCGACTGATCGAAGCAGTAAGTCCTCCAT TTTGACAAATGAAGAGCCTAACATAGTTGTCAAGTCAGAGGATACCGAGGCTCAGTTTCT AGCAAAGCAACATCAACACAGGTACATTGTCATGGCAATCCTCGTCTTATTACTTTCGAC ATTAGGATTATATTTTTTTGACAAAAGAAACGACATCCTCGAGTGGTTGATGGTTAGATT ATAGTACTTGTGTTAGAATTACATTGTACAGATTCTTTGATTGATTTTTGTGTTCTGATC TCTTCAAGATAGATCAATTCTTTTAAGTAAATTGTGTTTTGGTGGTATGCTTATTGCAAA CTCAAGTTAAGATACAGCCATTTGTAAAAGCACTTGTGTTTTTAGTGGAATGAGTATTGT TGTGGTTGTTGTACA