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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g010475.1.1
CDS Infomation

DUF1262 family protein (AHRD V3.3 *** A0A072UEA2_MEDTR)
Sequence

ATGTATGTAACAAGGCCTCTTTCTTACTACCAAAGGAATCCAGATGCACTTTCATTACCT
CCTGAAGGTCCAAATTCAGGTTACTTGGTGATTCAAGATGAGGAATCTGAAACATATTGT
TGTTTTGGACTTTGCAAAAATTATGATATCATGGACATGCCTATCCCTCAGAATAAGAAG
CTGACTGTTCGATATGAATCGGGTTCTGGTGAGAACAGGAGCGTTAGCAGGGACGAAGTG
ATGTTCATTCCAGTTCTTAACAAGCCATTGTCTTCCAATCAGTATTATGCTATCAAGCAT
CATGGAAAGCGCAAAGGACAAGCATTTACTTGTTCAACGGAGGAAGACAAGCAAACCTGC
TGTTTCTGCACATGTATACAAGACGTTAAACCGAAGCCATTAGATCCAGAGGAGGCATAT
CAGCAGTTTGAGATATGTCTATATGATACAGGTTGCAATGTCAAAGGTAACTTCTGTGCC
AAGTCTCTTGCTCCAGATGGTTTTCCACCATACTTTCTAAGGCGAAAAGGTTGGCATCTG
AGTGCCGAAACTCCTAAAAATTATGAACTCAATGATGATGCTCTAGGCCTCAATCCTGAG
TTGAGGCAACAACTTCCACAGTTCAATGTCACATCACCTTGTAAAAGTTCTGAAGTTGTA
GTCGTGGGGAAATGGTATTGTCCTTTTGCATTTATCAAAGATGAAACAGAACTTAAAGAA
CAGATGAAGAGATCAATTTTCTATGAAATGACACTTGAGCAGAGATGGGAACAGTTCTTC
ACTTGTCAAAATGACAAACTTAACCAAGGGAACTCAGTACTTGTGGATGTTGCACTTGAC
ACACAAGTTGTCCTTATTTCCGGAAGTGATAATAAAGCAACATGGGATGATAGAAATGTC
GTTGAAGGAGTAATATGGTTTAAAAGCTATGGTAAAGATGGAAATGAAGTAGCAAGTTTG
GGATTGAGACGTGAAATAGTTGAAAGAATGAAGTGGGAACAACAGAGAGGTGGATGGCAA
AATCAAGGGAGGATCAAACAAGTCGAAGAGAACAGAGAAAATAGTAGTGGATGGAGAAGA
TTCACTTGCTATGTTTTGGTTGAGAGGTTTGTGTTGAGAAGAATGGATACAAGTTTGGTA
ATGACTTATGATTTCAAGCACATTAACAAGGTTAAAAGTATATGGGAGTAA

Peptide Sequence

PEP ID

Solyc05g010475.1.1
PEP Infomation

DUF1262 family protein (AHRD V3.3 *** A0A072UEA2_MEDTR)
Sequence

MYVTRPLSYYQRNPDALSLPPEGPNSGYLVIQDEESETYCCFGLCKNYDIMDMPIPQNKK
LTVRYESGSGENRSVSRDEVMFIPVLNKPLSSNQYYAIKHHGKRKGQAFTCSTEEDKQTC
CFCTCIQDVKPKPLDPEEAYQQFEICLYDTGCNVKGNFCAKSLAPDGFPPYFLRRKGWHL
SAETPKNYELNDDALGLNPELRQQLPQFNVTSPCKSSEVVVVGKWYCPFAFIKDETELKE
QMKRSIFYEMTLEQRWEQFFTCQNDKLNQGNSVLVDVALDTQVVLISGSDNKATWDDRNV
VEGVIWFKSYGKDGNEVASLGLRREIVERMKWEQQRGGWQNQGRIKQVEENRENSSGWRR
FTCYVLVERFVLRRMDTSLVMTYDFKHINKVKSIWE*

Transcript Sequence

Transcript ID

Solyc05g010475.1.1
Transcript Infomation

DUF1262 family protein (AHRD V3.3 *** A0A072UEA2_MEDTR)
Sequence

ATGTATGTAACAAGGCCTCTTTCTTACTACCAAAGGAATCCAGATGCACTTTCATTACCT
CCTGAAGGTCCAAATTCAGGTTACTTGGTGATTCAAGATGAGGAATCTGAAACATATTGT
TGTTTTGGACTTTGCAAAAATTATGATATCATGGACATGCCTATCCCTCAGAATAAGAAG
CTGACTGTTCGATATGAATCGGGTTCTGGTGAGAACAGGAGCGTTAGCAGGGACGAAGTG
ATGTTCATTCCAGTTCTTAACAAGCCATTGTCTTCCAATCAGTATTATGCTATCAAGCAT
CATGGAAAGCGCAAAGGACAAGCATTTACTTGTTCAACGGAGGAAGACAAGCAAACCTGC
TGTTTCTGCACATGTATACAAGACGTTAAACCGAAGCCATTAGATCCAGAGGAGGCATAT
CAGCAGTTTGAGATATGTCTATATGATACAGGTTGCAATGTCAAAGGTAACTTCTGTGCC
AAGTCTCTTGCTCCAGATGGTTTTCCACCATACTTTCTAAGGCGAAAAGGTTGGCATCTG
AGTGCCGAAACTCCTAAAAATTATGAACTCAATGATGATGCTCTAGGCCTCAATCCTGAG
TTGAGGCAACAACTTCCACAGTTCAATGTCACATCACCTTGTAAAAGTTCTGAAGTTGTA
GTCGTGGGGAAATGGTATTGTCCTTTTGCATTTATCAAAGATGAAACAGAACTTAAAGAA
CAGATGAAGAGATCAATTTTCTATGAAATGACACTTGAGCAGAGATGGGAACAGTTCTTC
ACTTGTCAAAATGACAAACTTAACCAAGGGAACTCAGTACTTGTGGATGTTGCACTTGAC
ACACAAGTTGTCCTTATTTCCGGAAGTGATAATAAAGCAACATGGGATGATAGAAATGTC
GTTGAAGGAGTAATATGGTTTAAAAGCTATGGTAAAGATGGAAATGAAGTAGCAAGTTTG
GGATTGAGACGTGAAATAGTTGAAAGAATGAAGTGGGAACAACAGAGAGGTGGATGGCAA
AATCAAGGGAGGATCAAACAAGTCGAAGAGAACAGAGAAAATAGTAGTGGATGGAGAAGA
TTCACTTGCTATGTTTTGGTTGAGAGGTTTGTGTTGAGAAGAATGGATACAAGTTTGGTA
ATGACTTATGATTTCAAGCACATTAACAAGGTTAAAAGTATATGGGAGTAAGACAGTATG
ATACTACATGTGGTGTTGATGTTTCTGTGTGTACGTGTGACGACCTATGTTGCTTGAA