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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g010360.1.1
CDS Infomation

LOW QUALITY:F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A061E967_THECC)
Sequence

ATGTTTTCCAAACATGCTTGTCAAAGTGTACCTCTGGATGTACTTAGTAGCCTTCCTGAT
AACGTAATCGATGAGATTCTTATGTGTTTGCCTTTACGAGAAGCTGTTAGGACAAGCATC
TTATCGACGAAATGGAGATATAAGTGGTGCAGAATACCTGATTTGAAACTCGACTATAAG
CTTTGGCAATCAAAAGTGGACAAGAGGAGTGTTTTAAAAAAATTTACTAAAATCATCTAT
CATCTTGTGACTTCTCATGATGGACCAATTTCTAAGTTTATCCTCTCGATTCGTGGACTT
GAAGATAGTCCTGTGCTTGACAAGTTGATATATTTCCTCTCTAGGAATAGTGTTCAGCAT
CTTGAACTTGATATCTCTGGATACTACAAACATAAATTGCCTTCTTCAATTTTCACTTGT
TTGCGATTGATGCATCTAAGCCTCAGTGGTTGTTCAATACAACTTGCTCCACGGAACTTC
AAAGGTTTTGATACGTTAATTTGCCTGGAATTAAGGAACATGACAATTTCTTCCAAAATA
CTTGAAAATTTGATCTCTAATAGTCCATTGCTCGATACCTTAATGTTGCATCAAAATGTT
TATTTTGGTATCATTGAAATTAATGCTCCCAAGCTTCGAGCCTTTGAATTCAACGAAATG
GAAGGGTCTATATGTTTAAAAAGTACCCCTAATCTTCAAGATCTCACACTTTGGCATAAA
AACTATCATGTGGGGAGCAGAAATCATTTCAAGTCTTTCTATCATCTCGAATATCTGGTG
TTGAATGGCCATAGTCTCAAGGTTTTGGCTGTAGCAGCTGGTGAAGTAACAACAAGGCTT
CCGTTTGATCTTAACTCTCTCAAACAACTTTGCCTAGATGAGATTTATCTGCGTGAATTA
GATGTTGTCTCGAGTGCTGTTTTCTTGATTAAAAGTTTCCAACACTTGCAAATATTGGAA
ATACAGGTTGAAGATTATGATAACGATATGTCAGCACTACAATGTCTTGAATTGGAAGCT
TTCTCCGATGTGAAATTTAATCACCTTAGGAAATTTGAGCTAAGTTGTTTTACAGGCTCG
GACCGTGAGATGCAACTTATCAAGCTTTTGTTGGCCAAGTCTCCCGTATTAGAGAATATG
CGAATCCATCCCTTGCCAGATTATGATAATGCTTCTGAAAAACTCAAAAACGAAATCCCT
GTATTGCTAAATACACTTCAGCGTGCATCACCTCAAGTGGAAGTTGTTTATGTTTTTGGT
AGCTAA

Peptide Sequence

PEP ID

Solyc05g010360.1.1
PEP Infomation

LOW QUALITY:F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A061E967_THECC)
Sequence

MFSKHACQSVPLDVLSSLPDNVIDEILMCLPLREAVRTSILSTKWRYKWCRIPDLKLDYK
LWQSKVDKRSVLKKFTKIIYHLVTSHDGPISKFILSIRGLEDSPVLDKLIYFLSRNSVQH
LELDISGYYKHKLPSSIFTCLRLMHLSLSGCSIQLAPRNFKGFDTLICLELRNMTISSKI
LENLISNSPLLDTLMLHQNVYFGIIEINAPKLRAFEFNEMEGSICLKSTPNLQDLTLWHK
NYHVGSRNHFKSFYHLEYLVLNGHSLKVLAVAAGEVTTRLPFDLNSLKQLCLDEIYLREL
DVVSSAVFLIKSFQHLQILEIQVEDYDNDMSALQCLELEAFSDVKFNHLRKFELSCFTGS
DREMQLIKLLLAKSPVLENMRIHPLPDYDNASEKLKNEIPVLLNTLQRASPQVEVVYVFG
S*

Transcript Sequence

Transcript ID

Solyc05g010360.1.1
Transcript Infomation

LOW QUALITY:F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A061E967_THECC)
Sequence

ATGTTTTCCAAACATGCTTGTCAAAGTGTACCTCTGGATGTACTTAGTAGCCTTCCTGAT
AACGTAATCGATGAGATTCTTATGTGTTTGCCTTTACGAGAAGCTGTTAGGACAAGCATC
TTATCGACGAAATGGAGATATAAGTGGTGCAGAATACCTGATTTGAAACTCGACTATAAG
CTTTGGCAATCAAAAGTGGACAAGAGGAGTGTTTTAAAAAAATTTACTAAAATCATCTAT
CATCTTGTGACTTCTCATGATGGACCAATTTCTAAGTTTATCCTCTCGATTCGTGGACTT
GAAGATAGTCCTGTGCTTGACAAGTTGATATATTTCCTCTCTAGGAATAGTGTTCAGCAT
CTTGAACTTGATATCTCTGGATACTACAAACATAAATTGCCTTCTTCAATTTTCACTTGT
TTGCGATTGATGCATCTAAGCCTCAGTGGTTGTTCAATACAACTTGCTCCACGGAACTTC
AAAGGTTTTGATACGTTAATTTGCCTGGAATTAAGGAACATGACAATTTCTTCCAAAATA
CTTGAAAATTTGATCTCTAATAGTCCATTGCTCGATACCTTAATGTTGCATCAAAATGTT
TATTTTGGTATCATTGAAATTAATGCTCCCAAGCTTCGAGCCTTTGAATTCAACGAAATG
GAAGGGTCTATATGTTTAAAAAGTACCCCTAATCTTCAAGATCTCACACTTTGGCATAAA
AACTATCATGTGGGGAGCAGAAATCATTTCAAGTCTTTCTATCATCTCGAATATCTGGTG
TTGAATGGCCATAGTCTCAAGGTTTTGGCTGTAGCAGCTGGTGAAGTAACAACAAGGCTT
CCGTTTGATCTTAACTCTCTCAAACAACTTTGCCTAGATGAGATTTATCTGCGTGAATTA
GATGTTGTCTCGAGTGCTGTTTTCTTGATTAAAAGTTTCCAACACTTGCAAATATTGGAA
ATACAGGTTGAAGATTATGATAACGATATGTCAGCACTACAATGTCTTGAATTGGAAGCT
TTCTCCGATGTGAAATTTAATCACCTTAGGAAATTTGAGCTAAGTTGTTTTACAGGCTCG
GACCGTGAGATGCAACTTATCAAGCTTTTGTTGGCCAAGTCTCCCGTATTAGAGAATATG
CGAATCCATCCCTTGCCAGATTATGATAATGCTTCTGAAAAACTCAAAAACGAAATCCCT
GTATTGCTAAATACACTTCAGCGTGCATCACCTCAAGTGGAAGTTGTTTATGTTTTTGGT
AGCTAA