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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g010290.2.1
CDS Infomation

trigger factor (AHRD V3.3 *** AT3G25545.1)
Sequence

ATGGAAGACATACTTACAGAAATCCCTCCACCTTCAAGGTTCTTTTTGGAAGATCTGAAC
AACTTTTGCCCTCCATCTCCTCCTCTTCCCTCTCCATTCCTGTTGTTTTCAACTCCTAAC
CAGGAGAAGTTTTCTCGTCCTTCTCTCCTCATCATTGCCATGTCTTCTTCGTCACTTCAA
GTTTTTCATCATGTTTCTTCCAAAACCCTTGTTGGAACTGTTATCCTTCCTGAGATCCCA
TTCTCTGGCAATTCGGTTGAACCCTCTCTTAAAGACAAATCATGCAATATATATGCCCTG
AATGAAGATGATAACTTGATTATGATTGTGTGTGTTCAATATCAAGTTACTGCAGAGAGA
TCTCATGCAGTCGCAAAGCTACTGATTGGAGAACAGGTTATCCCGGAAAAGGTCTTAATT
TTGGATTCCATCCGAAGTTCTAATTATAGAGGAAGACTTTCACCCGATGAAGCATTTGCA
TTTAAGCTGGAATCATCTGCAGAGAGAAAAGCAAAAGCTGATGGCCATCAAGATTCACCA
CTGGTAAAATGCGCAGACTATCTTCCATCAGGAAGTGTTGTAGATGGCCTGGCAGCAGCT
TTATTGAGCCGATGTCAGTTAAAGAAGATAAGGGGAACTCTGTGTGTTTCATGTGACATG
AAGAAGCTTGAGGAGGAATTTCTAAAATTAGGCCGGAGTAAGGATTTCCTTCTTGAATCT
GAACTCTATACATGA

Peptide Sequence

PEP ID

Solyc05g010290.2.1
PEP Infomation

trigger factor (AHRD V3.3 *** AT3G25545.1)
Sequence

MEDILTEIPPPSRFFLEDLNNFCPPSPPLPSPFLLFSTPNQEKFSRPSLLIIAMSSSSLQ
VFHHVSSKTLVGTVILPEIPFSGNSVEPSLKDKSCNIYALNEDDNLIMIVCVQYQVTAER
SHAVAKLLIGEQVIPEKVLILDSIRSSNYRGRLSPDEAFAFKLESSAERKAKADGHQDSP
LVKCADYLPSGSVVDGLAAALLSRCQLKKIRGTLCVSCDMKKLEEEFLKLGRSKDFLLES
ELYT*

Transcript Sequence

Transcript ID

Solyc05g010290.2.1
Transcript Infomation

trigger factor (AHRD V3.3 *** AT3G25545.1)
Sequence

TTATATCCCACACAGTATTGAAGGTTCTGCAAGCAACATTTTCTTCAGTCGAGTTGATAA
TCAGTGTGTCCCTTCTCGTCGGAGCTGTAAACTCATCTCCATTTTTTCCGGCGGAATCAA
TTTGTGATAGGTTGACCAAACAGATATGGAAGACATACTTACAGAAATCCCTCCACCTTC
AAGGTTCTTTTTGGAAGATCTGAACAACTTTTGCCCTCCATCTCCTCCTCTTCCCTCTCC
ATTCCTGTTGTTTTCAACTCCTAACCAGGAGAAGTTTTCTCGTCCTTCTCTCCTCATCAT
TGCCATGTCTTCTTCGTCACTTCAAGTTTTTCATCATGTTTCTTCCAAAACCCTTGTTGG
AACTGTTATCCTTCCTGAGATCCCATTCTCTGGCAATTCGGTTGAACCCTCTCTTAAAGA
CAAATCATGCAATATATATGCCCTGAATGAAGATGATAACTTGATTATGATTGTGTGTGT
TCAATATCAAGTTACTGCAGAGAGATCTCATGCAGTCGCAAAGCTACTGATTGGAGAACA
GGTTATCCCGGAAAAGGTCTTAATTTTGGATTCCATCCGAAGTTCTAATTATAGAGGAAG
ACTTTCACCCGATGAAGCATTTGCATTTAAGCTGGAATCATCTGCAGAGAGAAAAGCAAA
AGCTGATGGCCATCAAGATTCACCACTGGTAAAATGCGCAGACTATCTTCCATCAGGAAG
TGTTGTAGATGGCCTGGCAGCAGCTTTATTGAGCCGATGTCAGTTAAAGAAGATAAGGGG
AACTCTGTGTGTTTCATGTGACATGAAGAAGCTTGAGGAGGAATTTCTAAAATTAGGCCG
GAGTAAGGATTTCCTTCTTGAATCTGAACTCTATACATGATATCCCTGGTTTGAATCAAA
TGGCCTTTCTTCTGAT