Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009920.3.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G26090.1)
Sequence

ATGTGGAGTTCCAGTATGCAAATCTTAACAGCATCTTCATTATTCTCCACAACAAAGAAC
CCATATTCTGAATTTTTCAATCAGTCGGTGAAAAAGATAGAATCTCCAGCTAAAACTAGA
AGAAGAAGGGGAGCAAGAATGGAGATTTTGGCCATGGCTAGTGATAATTCAGCTAAAAAT
GAAAAACCCACTAAGCTAATTACCTTTTTGGGTAAAGGGGGTTCTGGGAAAACCACTTCT
GCCATTTTTGCTGCTCAGCATTATGCAATGGCAGGGCTCAAAACCTGTTTGGTGATACAT
TCTCAAGACCCCACAGCTGAATATCTTCTGAATTGTAAGATTGGGACGTCGCCAATAACA
TGCAACGACAACCTCTCAGCTGTCAGATTGGAAACTACAAAAATGCTCCTTGATTCTCTC
AATAAACTGAAGCAAGCAGATGCTCGCCTTAATATGACTCAAGGAGTTCTTGAAGGGGTG
GTCGGAGAAGAGCTTGGAGTACTTCCTGGAATGGACTCCATATTTTCATCCCTAGCACTC
GAGCGGCTTGTAGGATATTTTGAAAATGTGGTTCAACAGAACAGCAAAAAAGAGAAATTT
GATATTATTATATATGATGGCATGAGTACTGAAGAAACAATCAGAATGATTGGTGCAACC
AGCAAAGCAAGATTATACTTAAAATATCTCCGCAATTTTGCTGAAAAAACTGATTTAGGT
AGGCTGGCAAGTCCCTCACTTTTGAGACTTGCCGAAGAAGCCATGACTCTAAGCGGTAGA
AATCCTAATCTGAATGGGAAAATGAGTTCAGAAATCTGGGACCTTCTAGAACAAGTATTG
GAGAGAGGGTCTTCAATATTTGCAGAACCAAAAAGGTTTGGTTGCTATATTGTGGTGGAT
AGAAACAGCCCTGTGTCTATGGCTTCTTCTTTACGTTACTGGGGTTGCATAATCCAGGCT
GGTGCACAGGTTTCTGGTGCATTTGCTCTTGCAAGACCAAATTCGAGTGGAGAAGTAGGG
GCAACGATTGAGGACTTTTCACCTTTGCCTTCTGCTTTTGTTCCACATATCTCAGACGGA
GCCCATTTAGATTGGGACAAAATTATGCAGGATAGTCATAGTGAGAGTGCACGGAATCTT
CTGACTGTAACAGCTCATGAGGCCAGAATTCCTGCGGTTATCTTTGATCCAACCAACAAA
ATCGTCACTCTTCTCATGCCTGGTTTTGACAAATCAGAAATCAAGCTATATCAATTTAGA
GGAGGGTCTGAGTTGTTGGTGGAGGCCGGTGATCAGAGACGTGTGATTCGTCTACCATCT
CAACTTCAAGGGAAGGTTGGAGGTGCTAAATTTGCAGATAGAAGTCTTGTCATCACAATG
AGATAG

Peptide Sequence

PEP ID

Solyc05g009920.3.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G26090.1)
Sequence

MWSSSMQILTASSLFSTTKNPYSEFFNQSVKKIESPAKTRRRRGARMEILAMASDNSAKN
EKPTKLITFLGKGGSGKTTSAIFAAQHYAMAGLKTCLVIHSQDPTAEYLLNCKIGTSPIT
CNDNLSAVRLETTKMLLDSLNKLKQADARLNMTQGVLEGVVGEELGVLPGMDSIFSSLAL
ERLVGYFENVVQQNSKKEKFDIIIYDGMSTEETIRMIGATSKARLYLKYLRNFAEKTDLG
RLASPSLLRLAEEAMTLSGRNPNLNGKMSSEIWDLLEQVLERGSSIFAEPKRFGCYIVVD
RNSPVSMASSLRYWGCIIQAGAQVSGAFALARPNSSGEVGATIEDFSPLPSAFVPHISDG
AHLDWDKIMQDSHSESARNLLTVTAHEARIPAVIFDPTNKIVTLLMPGFDKSEIKLYQFR
GGSELLVEAGDQRRVIRLPSQLQGKVGGAKFADRSLVITMR*

Transcript Sequence

Transcript ID

Solyc05g009920.3.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G26090.1)
Sequence

TAGTAGAATAAAAAAATCATATGGTCTAATAGATAAAGCTAGTAATCTCTTCATCGTGAT
TTCGAATCATGAATATGAAAAAATTCCAAAAGTCATATACTCTCAACCTTATCTTTACGA
ATTTAGATTAATCGAACTCCGATTTAGCACAGAAGAGGAAAAGAGCCTAATCACTCATCT
CCCTCACTTTTCCAAACTCTCAGTTCAATTGCCATCTGCAACTCTCTGATTAAACATCTT
ACACCAATAGAAAAAAAATGTGGAGTTCCAGTATGCAAATCTTAACAGCATCTTCATTAT
TCTCCACAACAAAGAACCCATATTCTGAATTTTTCAATCAGTCGGTGAAAAAGATAGAAT
CTCCAGCTAAAACTAGAAGAAGAAGGGGAGCAAGAATGGAGATTTTGGCCATGGCTAGTG
ATAATTCAGCTAAAAATGAAAAACCCACTAAGCTAATTACCTTTTTGGGTAAAGGGGGTT
CTGGGAAAACCACTTCTGCCATTTTTGCTGCTCAGCATTATGCAATGGCAGGGCTCAAAA
CCTGTTTGGTGATACATTCTCAAGACCCCACAGCTGAATATCTTCTGAATTGTAAGATTG
GGACGTCGCCAATAACATGCAACGACAACCTCTCAGCTGTCAGATTGGAAACTACAAAAA
TGCTCCTTGATTCTCTCAATAAACTGAAGCAAGCAGATGCTCGCCTTAATATGACTCAAG
GAGTTCTTGAAGGGGTGGTCGGAGAAGAGCTTGGAGTACTTCCTGGAATGGACTCCATAT
TTTCATCCCTAGCACTCGAGCGGCTTGTAGGATATTTTGAAAATGTGGTTCAACAGAACA
GCAAAAAAGAGAAATTTGATATTATTATATATGATGGCATGAGTACTGAAGAAACAATCA
GAATGATTGGTGCAACCAGCAAAGCAAGATTATACTTAAAATATCTCCGCAATTTTGCTG
AAAAAACTGATTTAGGTAGGCTGGCAAGTCCCTCACTTTTGAGACTTGCCGAAGAAGCCA
TGACTCTAAGCGGTAGAAATCCTAATCTGAATGGGAAAATGAGTTCAGAAATCTGGGACC
TTCTAGAACAAGTATTGGAGAGAGGGTCTTCAATATTTGCAGAACCAAAAAGGTTTGGTT
GCTATATTGTGGTGGATAGAAACAGCCCTGTGTCTATGGCTTCTTCTTTACGTTACTGGG
GTTGCATAATCCAGGCTGGTGCACAGGTTTCTGGTGCATTTGCTCTTGCAAGACCAAATT
CGAGTGGAGAAGTAGGGGCAACGATTGAGGACTTTTCACCTTTGCCTTCTGCTTTTGTTC
CACATATCTCAGACGGAGCCCATTTAGATTGGGACAAAATTATGCAGGATAGTCATAGTG
AGAGTGCACGGAATCTTCTGACTGTAACAGCTCATGAGGCCAGAATTCCTGCGGTTATCT
TTGATCCAACCAACAAAATCGTCACTCTTCTCATGCCTGGTTTTGACAAATCAGAAATCA
AGCTATATCAATTTAGAGGAGGGTCTGAGTTGTTGGTGGAGGCCGGTGATCAGAGACGTG
TGATTCGTCTACCATCTCAACTTCAAGGGAAGGTTGGAGGTGCTAAATTTGCAGATAGAA
GTCTTGTCATCACAATGAGATAGCAGATGAAATCAAGAAACCTCACCTACATATTTAGCC
ACAAGCATGCAGCTAGAGTCACTTCACATCAAATGTTGTAAACACCATTGATTTTATGAG
TTCTTTCATGGCCAAGCAGTAAATAAATCATTCTCCTATTTATACACAATGGAGGTTGTC
CATGTTAAATGGAGAAAAGGGTACTGATGATTGAGTCCCCACAGAATATATTCTCAAGTT
TCTTGTAGACACATTCTTCAAATTTGAAGTTAATTTCGAATAATTCTCGAATTGCTTTAA
TAGTTATTTCTTTCTCATGAATATGCAGGTCCAAATTTCACTCACTGTTCAGTGAAGTTT
TTAAAGTGTTTAACCCTACACTGTTTATCCCTGCAACTTCTTTTTAACTAATCTGTGTTA
TCTGACATTCTCCTTGAGTTTAACCTTTCGAATTGTACAAATGTCCAAGATAGAATATGT
TTTGCTATACTTGGAGAAAATGATGAAATATACAGTGACCAAAACCAAAATACAAATATT
CTCATGGTTCTTGTGTATTCTCTCCTCCTGTTTGTGACTGAACGCGACTCCTTAGTTCTT
CAAACGCCTTCATGCTTTCAGCATCAAA