Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009910.3.1
CDS Infomation

Coiled-coil domain-containing protein, putative (AHRD V3.3 *** B9SEI0_RICCO)
Sequence

ATGTCTTCACTTGCAGCTGCTAGGGCAGACAACTTTTACTATCCTCCAGAATGGTCTCCC
AAGAAGGGTTCACTGAACAAGTTCCGTGGTCAACATGCTCTCCGAGAGAGAGCAAGAAAG
ATAGACCAGGGCATTTTAATTATAAGGTTTGAGATGCCATTTAATATCTGGTGTGGGGGA
TGTGAGTCGATGATTGCCAAGGGTGTGAGGTTCAATGCTGAGAAAAAGCAAGTAGGGAAT
TATTACTCCACAAAGATATGGAGCTTTTCGATGAAATCTGCATGCTGCAAGCATGAGATT
GTCATTCAAACAGATCCAAAAAACTGTGCTTATGTTATTATTAGTGGAGCTCAAAAGAAG
ACTGAAGACTATGATGCTGAAGATGCTGAAACCTTGGTACTCCCAGTAGATGAAGATAAA
AGTAAGTTGGTGGATCCTTTTTATCGCCTTGAGCACCAGGAGGAGGACTTGAAGAAGAAG
AAAAAAGCTGAGCCTTTACTTGTTCGTCTTCAGCGAGTATCTGATACTAGACATTCAGAT
GATTATGCGATGAACAAGGCTCTACGAGCCACACTTAGGGGTCAAAAGAAAAGAGTTGCC
GAAGAAGAGGCTGCTGCTAAGAAAGTAGGACTTGGTATTAGGCTATTACCTCCTTCTACA
GAAGATGCTGCAACTGCTGCAAGTGTTAAATTTGCTCATAAGTTCGATAAGAACAGAAGA
GATAAACGAGCCATGATTTACTCTGGTTCAATCTTTGGATCGTCTGGCTCTTCTAAACAT
TCAGAGCTGGAATCTAAGAGGAGAAAAATAAACGCTTCTGCTGCATCAAAGCTGTTGGTT
GGAGGATTTAAGCCCTCGTCATGGTCTGAAGCTACTGTTCCATCTAAGAAACGGAGAGTT
TGA

Peptide Sequence

PEP ID

Solyc05g009910.3.1
PEP Infomation

Coiled-coil domain-containing protein, putative (AHRD V3.3 *** B9SEI0_RICCO)
Sequence

MSSLAAARADNFYYPPEWSPKKGSLNKFRGQHALRERARKIDQGILIIRFEMPFNIWCGG
CESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCAYVIISGAQKK
TEDYDAEDAETLVLPVDEDKSKLVDPFYRLEHQEEDLKKKKKAEPLLVRLQRVSDTRHSD
DYAMNKALRATLRGQKKRVAEEEAAAKKVGLGIRLLPPSTEDAATAASVKFAHKFDKNRR
DKRAMIYSGSIFGSSGSSKHSELESKRRKINASAASKLLVGGFKPSSWSEATVPSKKRRV
*

Transcript Sequence

Transcript ID

Solyc05g009910.3.1
Transcript Infomation

Coiled-coil domain-containing protein, putative (AHRD V3.3 *** B9SEI0_RICCO)
Sequence

ACAATCCCCAAACTGCAATCAAAACGCGAAATCCCTAAACTGAATCTTCAAGGATCAAAA
CGATCGATCAGAGAAACGAAGTTTTGAAGATCAAAAAATGTCTTCACTTGCAGCTGCTAG
GGCAGACAACTTTTACTATCCTCCAGAATGGTCTCCCAAGAAGGGTTCACTGAACAAGTT
CCGTGGTCAACATGCTCTCCGAGAGAGAGCAAGAAAGATAGACCAGGGCATTTTAATTAT
AAGGTTTGAGATGCCATTTAATATCTGGTGTGGGGGATGTGAGTCGATGATTGCCAAGGG
TGTGAGGTTCAATGCTGAGAAAAAGCAAGTAGGGAATTATTACTCCACAAAGATATGGAG
CTTTTCGATGAAATCTGCATGCTGCAAGCATGAGATTGTCATTCAAACAGATCCAAAAAA
CTGTGCTTATGTTATTATTAGTGGAGCTCAAAAGAAGACTGAAGACTATGATGCTGAAGA
TGCTGAAACCTTGGTACTCCCAGTAGATGAAGATAAAAGTAAGTTGGTGGATCCTTTTTA
TCGCCTTGAGCACCAGGAGGAGGACTTGAAGAAGAAGAAAAAAGCTGAGCCTTTACTTGT
TCGTCTTCAGCGAGTATCTGATACTAGACATTCAGATGATTATGCGATGAACAAGGCTCT
ACGAGCCACACTTAGGGGTCAAAAGAAAAGAGTTGCCGAAGAAGAGGCTGCTGCTAAGAA
AGTAGGACTTGGTATTAGGCTATTACCTCCTTCTACAGAAGATGCTGCAACTGCTGCAAG
TGTTAAATTTGCTCATAAGTTCGATAAGAACAGAAGAGATAAACGAGCCATGATTTACTC
TGGTTCAATCTTTGGATCGTCTGGCTCTTCTAAACATTCAGAGCTGGAATCTAAGAGGAG
AAAAATAAACGCTTCTGCTGCATCAAAGCTGTTGGTTGGAGGATTTAAGCCCTCGTCATG
GTCTGAAGCTACTGTTCCATCTAAGAAACGGAGAGTTTGACATGATCCATTCCTGCCGAT
AGATTTGTTAGCCTACCAGTCGAAAATTGAGTTGGAAACTTGTTGACTCCCAACATATTA
ATCGTTCGAGTAGGCAGTTGAGTTTACTTGTACAGATTTGATGTTTGTCTAAGTGATTTT
TGTTCCGGTTTTTAACTGTTCTTGTATTATCTTTGCAATAAAAGAGTTTGTTTCCATTAC
AGCAAAGTTAGAGCCAATCCGAAGTAGCTCGACTCTTCGATGGACACAATGTGGGTGTCC
TTTGAATCCGACCTCTAGATCTACACTTGTATCAACCCGACT