Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009870.3.1
CDS Infomation

Transmembrane Fragile-X-F-associated protein (AHRD V3.3 *** AT1G68820.4)
Sequence

ATGAGATATCTTACCCGGAACAGTGGATTTCTTGCATCTGTGGATGAAGATGATCAGCAT
AGTGGAATATGCAGTTTGCAGGACATTGGTGGTCATGTGATGAAAATTCCTCTTATTTGT
TTCCAGATATTGCTTTTTATGCGCTTAGCGGGGACCCCACCAAGTGCTGCATTTATCCCA
ATTCCTGTTCTGTTTATTCCTCTTTTCCTACTTCAAGGAGCTGGTCTTTTATTCTCTGTT
TATAGACTTGTGGAGACGGTTATTCTTCTGGTAGATGGTGAACGTGGTGTTAGAAGCTAT
TTTAGGATGTCTTCTGTTATTCGTGATTCTTTCAGTTGCATGCGTCATGGGTCAAGGTTG
TTAGGTTGGTGGTCAATTGATGAAGATAGCCGAGAGGAACAAGCTCGTCTATATTATGCA
GAGACAGAGACATCTGGGTACAATACTTTCTCACCTGATACTGTAAAGCAAATGCCTAAG
GCGAAGCTTACTGAAGAGATATGGAGATTACAAGCAGCACTTTGTGAGCAATCAGATTTC
ACACAGTCAAAACAGGAGGAGTTCGAAAGACTTCAAAATGAAAAAATTCTATGTAGAATT
TGCTTCGAGGAACATATAAATATTCTCCTCCTTCCTTGTAGGCATCACATCCTCTGCAGT
ACCTGTTGTGACAAGTGCAAGAGGTGCCCTATCTGCCGTATGTTTATAGAAGAACGTTTA
CTTGTAAATGATGTGTAG

Peptide Sequence

PEP ID

Solyc05g009870.3.1
PEP Infomation

Transmembrane Fragile-X-F-associated protein (AHRD V3.3 *** AT1G68820.4)
Sequence

MRYLTRNSGFLASVDEDDQHSGICSLQDIGGHVMKIPLICFQILLFMRLAGTPPSAAFIP
IPVLFIPLFLLQGAGLLFSVYRLVETVILLVDGERGVRSYFRMSSVIRDSFSCMRHGSRL
LGWWSIDEDSREEQARLYYAETETSGYNTFSPDTVKQMPKAKLTEEIWRLQAALCEQSDF
TQSKQEEFERLQNEKILCRICFEEHINILLLPCRHHILCSTCCDKCKRCPICRMFIEERL
LVNDV*

Transcript Sequence

Transcript ID

Solyc05g009870.3.1
Transcript Infomation

Transmembrane Fragile-X-F-associated protein (AHRD V3.3 *** AT1G68820.4)
Sequence

ATGAGATATCTTACCCGGAACAGTGGATTTCTTGCATCTGTGGATGAAGATGATCAGCAT
AGTGGAATATGCAGTTTGCAGGACATTGGTGGTCATGTGATGAAAATTCCTCTTATTTGT
TTCCAGATATTGCTTTTTATGCGCTTAGCGGGGACCCCACCAAGTGCTGCATTTATCCCA
ATTCCTGTTCTGTTTATTCCTCTTTTCCTACTTCAAGGAGCTGGTCTTTTATTCTCTGTT
TATAGACTTGTGGAGACGGTTATTCTTCTGGTAGATGGTGAACGTGGTGTTAGAAGCTAT
TTTAGGATGTCTTCTGTTATTCGTGATTCTTTCAGTTGCATGCGTCATGGGTCAAGGTTG
TTAGGTTGGTGGTCAATTGATGAAGATAGCCGAGAGGAACAAGCTCGTCTATATTATGCA
GAGACAGAGACATCTGGGTACAATACTTTCTCACCTGATACTGTAAAGCAAATGCCTAAG
GCGAAGCTTACTGAAGAGATATGGAGATTACAAGCAGCACTTTGTGAGCAATCAGATTTC
ACACAGTCAAAACAGGAGGAGTTCGAAAGACTTCAAAATGAAAAAATTCTATGTAGAATT
TGCTTCGAGGAACATATAAATATTCTCCTCCTTCCTTGTAGGCATCACATCCTCTGCAGT
ACCTGTTGTGACAAGTGCAAGAGGTGCCCTATCTGCCGTATGTTTATAGAAGAACGTTTA
CTTGTAAATGATGTGTAGTTACTATCGACAAAGAAGCTTAGTTTCCCCCGAGCTTGTTCT
TTTGATCAGAGGAACAAGTTAGATGGTGAATGCGGTTTTATTGAGTCATGTCACCACAAG
TATACATTGATTTCAATGTGTATTCGTCTGAATCGAGTTGTGTCTGTCTTGTGAACTGTG
TATATTAAACACAAGATTATGTTAATACTGGCAATAGATTCTGTAAAGCAATTGTTATAC
CAGTTCTGTGCATATTTTCTCTGATCTATCAAATGTATGATGATGACATTTGACATTTTT
ACCAATTGTAATCTGAAGTTGGGAAAATGTTTTCCTTCATATCATTTTATAGTATCGCTC
TCTCATATAACTCCTCGTTCAATTCTTTTGAATTCTTTTATTAATCGTTCGAGGATTCCC
CCTCCCAACT