Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009680.1.1
CDS Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G25510.1)
Sequence

ATGGCGACTTCCATTTTCTTCTTTGTTCTGTTATTCACCACAGTTCTCTCACGAACAACT
CCAGATGATACTTCAAGAACAAAAATACTCGACGTTTCTTCCTCCATTCAGAAAACTCAT
AATCTGTTCTCACTTGATTCGTCTCTGAATTCTCTGAAACATGAAGAAAATCAAGTTTAT
TCATCATTGCTGAGTTTTCAACTGCATTCTAGAGTAGCAGTTCAGGGGACTTCACATAAG
GATTACGATTCATTGATGCTAGCTCGACTTGAACGTGACTCAGCTCGAGCTAAATCACTT
CAAACTCGTGTAGATCTGGTTGTACAAGGAATTGGGAAATCGGATCTCAAACCGATGGAA
ACTGAGTTTCGAGAGATTCAAGCTGAGGAAATTGAAGGACCAATTATTTCCGGGACGAGT
CAAGGAAGCGGTGAGTATTTCTCACGAATCGGAATTGGTCACCCGCCGAGTCAAGTTTAT
ATGGTGTTAGACACCGGAAGTGATGTTAACTGGGTTCAGTGTTCTCCTTGTGCTGATTGT
TACCAACAAGCTGATCCAATTTTTGAACCTGCTTCGTCTTCGACGTTTTCGCCGCTCACT
TGTGAAACGCAACAGTGTAAATCGCTTGATGTTTCTGAATGCAGGAATGATACTTGTTTA
TACGAAGTATCTTACGGAGATGGCTCGTATACCGTTGGAGATTTAGTGACGGAGAGTATC
ACATTTGCCGGTTCGTCTTCCGTTGAGAATGTAGCTATCGGCTGTGGACATAATAACGAA
GGTTTATTCGTCGGAGCAGCTGGATTATTAGGTCTCGGCGGCGGCGCTTTATCATTTCCT
TCACAGATAAATGCATCTTCCTTCTCATACTGCTTAGTAGACCGTGACTCCGACTCTACC
TCAACTCTCGAGTTCGGCGGCGCAATTCCGCCGAACGCCGTCACTGCCCCGATGATCAAA
AACTCAAAACTCGACACATTCTACTACGTAGACTTAACCGGAATCAGCGTCGCCGGCAAC
ATGCTTTCAGTTAATCCATCAGCTTTCAAAATAGCCGACAACGGCGATGGCGGAGTAATC
GTCGATTCAGGTACGGCGGTGACGAGATTGAAAACAGACGTGTACAACACGCTCCGTGAT
GAGTTCGTGAAAGGGACGAGACACCTGCCGTCAACTAACGCCGTTGCGTTATTTGACACG
TGTTACGATTTGAAATCAATGAAAAGCGTTGAAGTACCAACGGTGTCGTTCCATTTTTCT
AACGGAAATGAGTTAGCATTACCGGCTAAGAATTACCTGATACCTGTTGATTCATCGAGT
ACATTTTGTTTCGCCTTCGCTCCATCGTCATCGTCCCTATCGATAATCGGTAACGTTCAA
CAGGAAGGGACACGTGTCAGTTTCGACCTGGTAAATTCTCTCATCGGATTCTCATCCAAT
CAATGCTAG

Peptide Sequence

PEP ID

Solyc05g009680.1.1
PEP Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G25510.1)
Sequence

MATSIFFFVLLFTTVLSRTTPDDTSRTKILDVSSSIQKTHNLFSLDSSLNSLKHEENQVY
SSLLSFQLHSRVAVQGTSHKDYDSLMLARLERDSARAKSLQTRVDLVVQGIGKSDLKPME
TEFREIQAEEIEGPIISGTSQGSGEYFSRIGIGHPPSQVYMVLDTGSDVNWVQCSPCADC
YQQADPIFEPASSSTFSPLTCETQQCKSLDVSECRNDTCLYEVSYGDGSYTVGDLVTESI
TFAGSSSVENVAIGCGHNNEGLFVGAAGLLGLGGGALSFPSQINASSFSYCLVDRDSDST
STLEFGGAIPPNAVTAPMIKNSKLDTFYYVDLTGISVAGNMLSVNPSAFKIADNGDGGVI
VDSGTAVTRLKTDVYNTLRDEFVKGTRHLPSTNAVALFDTCYDLKSMKSVEVPTVSFHFS
NGNELALPAKNYLIPVDSSSTFCFAFAPSSSSLSIIGNVQQEGTRVSFDLVNSLIGFSSN
QC*

Transcript Sequence

Transcript ID

Solyc05g009680.1.1
Transcript Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G25510.1)
Sequence

ATGGCGACTTCCATTTTCTTCTTTGTTCTGTTATTCACCACAGTTCTCTCACGAACAACT
CCAGATGATACTTCAAGAACAAAAATACTCGACGTTTCTTCCTCCATTCAGAAAACTCAT
AATCTGTTCTCACTTGATTCGTCTCTGAATTCTCTGAAACATGAAGAAAATCAAGTTTAT
TCATCATTGCTGAGTTTTCAACTGCATTCTAGAGTAGCAGTTCAGGGGACTTCACATAAG
GATTACGATTCATTGATGCTAGCTCGACTTGAACGTGACTCAGCTCGAGCTAAATCACTT
CAAACTCGTGTAGATCTGGTTGTACAAGGAATTGGGAAATCGGATCTCAAACCGATGGAA
ACTGAGTTTCGAGAGATTCAAGCTGAGGAAATTGAAGGACCAATTATTTCCGGGACGAGT
CAAGGAAGCGGTGAGTATTTCTCACGAATCGGAATTGGTCACCCGCCGAGTCAAGTTTAT
ATGGTGTTAGACACCGGAAGTGATGTTAACTGGGTTCAGTGTTCTCCTTGTGCTGATTGT
TACCAACAAGCTGATCCAATTTTTGAACCTGCTTCGTCTTCGACGTTTTCGCCGCTCACT
TGTGAAACGCAACAGTGTAAATCGCTTGATGTTTCTGAATGCAGGAATGATACTTGTTTA
TACGAAGTATCTTACGGAGATGGCTCGTATACCGTTGGAGATTTAGTGACGGAGAGTATC
ACATTTGCCGGTTCGTCTTCCGTTGAGAATGTAGCTATCGGCTGTGGACATAATAACGAA
GGTTTATTCGTCGGAGCAGCTGGATTATTAGGTCTCGGCGGCGGCGCTTTATCATTTCCT
TCACAGATAAATGCATCTTCCTTCTCATACTGCTTAGTAGACCGTGACTCCGACTCTACC
TCAACTCTCGAGTTCGGCGGCGCAATTCCGCCGAACGCCGTCACTGCCCCGATGATCAAA
AACTCAAAACTCGACACATTCTACTACGTAGACTTAACCGGAATCAGCGTCGCCGGCAAC
ATGCTTTCAGTTAATCCATCAGCTTTCAAAATAGCCGACAACGGCGATGGCGGAGTAATC
GTCGATTCAGGTACGGCGGTGACGAGATTGAAAACAGACGTGTACAACACGCTCCGTGAT
GAGTTCGTGAAAGGGACGAGACACCTGCCGTCAACTAACGCCGTTGCGTTATTTGACACG
TGTTACGATTTGAAATCAATGAAAAGCGTTGAAGTACCAACGGTGTCGTTCCATTTTTCT
AACGGAAATGAGTTAGCATTACCGGCTAAGAATTACCTGATACCTGTTGATTCATCGAGT
ACATTTTGTTTCGCCTTCGCTCCATCGTCATCGTCCCTATCGATAATCGGTAACGTTCAA
CAGGAAGGGACACGTGTCAGTTTCGACCTGGTAAATTCTCTCATCGGATTCTCATCCAAT
CAATGCTAG