Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009550.3.1
CDS Infomation

Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061ECG5_THECC)
Sequence

ATGGGAAGAAAACTTGATGCTTTACTAGGAAGAAACTTTAAAACTAGTAAATTTAAGGCC
ACTGCAAATTTAGCCATTTCCAGGGTTACTGTACTCAAGAACCAACGCCAAGCACGGTGC
TCGATCGCGCGGTCTGATGTAGTTCAGCTCTTAAACCTTGGGTACCATGAAAGAGCTCTT
CTAAGGGTTGAGCAAGTAATCAAGGAACAAAATATGTTGGATGTGTTTGACATGGTAGAA
GGCTATTGTCTTCTCACTATTGAAAGAATCAACCTTATTCAACAAGAGAAAATATGTCCT
GAGGAATTGAAGGAGGCGATATCGAGCTTGATTTTTGCAGCTTCAAGGTGTGGTGAATTC
CCAGAACTTCAAGAGCTTCGAGGTATCTTCACATCAAGATTTGGGAAAGAATTCGCTGCT
CGTGCTGTTGAGTTAAGAAACAATTGTGGAGTAAATACTAAGATGATACAAAAGCTGTCA
ACAAGGATGCCTAGCTTAGAACAAAGAACCAAAGTGCTTAAGGAAATTGCTGCAGAGAAT
AACATTGTTTTGAAAATTGAGGAAATAATGTTGGAAAATACAGAGGAGAAGGAGGTCACT
GCGAAAAGGAAGGACGAGCCTGAAGATCACGAATCAGTTTTGCCTCAAGATGTAGACCAT
GAAGCTAGGAGAAAATTTAAAGATGTAGAAGCTGCAGCTCAAGCAGCGTTTGAGTCTGCT
GCTTATGCAGCAGCAGCTGCAAGAGCAGCTGTGGAACTCTCTCGGTCTGAATCACGTGAT
ACAGATGACCCCAAGAGTCCGAGTCAAAAGCCAAGGGATGTATCGGACTCTCGTGAGGAT
TTGAAATCTGAGTTTCATGCAGGAGAGGAGAAGAATAATGAGGGAGTTGAGAAAATCGAG
ACTAGTCAGAACTATGGTTTTCATTCTGAAGTCGATCAATTCTCAGATGGAGATGAAGTG
GAAGAAGTCGAACAGAAGAAGTTTGAAAAACAGTCCAAGAGATCAGTCTCGGTTTCAAGT
TCTGATATTTCAGCAGACGACATTCTTGTTGATGAGGTGAAAAGTCCCAGACATGGTGTA
ATTTATGATGAAATAGATGAAGAAGTTGGGGAGGAAAACAGAATCCCGTCATTAAAACAT
CCTAAGAATGAAGTTTTTGGTTCTCCGGTGCACCAAACAGGAAATGAGAAGGAGATTGAA
GGATTTACAAAGCAAGGTGCAGAAAAACTAGACATAAATAAGAAGCCAATATCAATGAGA
ACTAGGAAGAACTATCACTGGTGA

Peptide Sequence

PEP ID

Solyc05g009550.3.1
PEP Infomation

Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061ECG5_THECC)
Sequence

MGRKLDALLGRNFKTSKFKATANLAISRVTVLKNQRQARCSIARSDVVQLLNLGYHERAL
LRVEQVIKEQNMLDVFDMVEGYCLLTIERINLIQQEKICPEELKEAISSLIFAASRCGEF
PELQELRGIFTSRFGKEFAARAVELRNNCGVNTKMIQKLSTRMPSLEQRTKVLKEIAAEN
NIVLKIEEIMLENTEEKEVTAKRKDEPEDHESVLPQDVDHEARRKFKDVEAAAQAAFESA
AYAAAAARAAVELSRSESRDTDDPKSPSQKPRDVSDSREDLKSEFHAGEEKNNEGVEKIE
TSQNYGFHSEVDQFSDGDEVEEVEQKKFEKQSKRSVSVSSSDISADDILVDEVKSPRHGV
IYDEIDEEVGEENRIPSLKHPKNEVFGSPVHQTGNEKEIEGFTKQGAEKLDINKKPISMR
TRKNYHW*

Transcript Sequence

Transcript ID

Solyc05g009550.3.1
Transcript Infomation

Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061ECG5_THECC)
Sequence

GGCAATGGATCATTCGGGAATAATTTCTGATTCGAGCTTTGAATATAAAAAATATATTTT
ATATAATATATTTTTGAATTAATTAAATTTTAATGCGAATAACTTCTGATTTGAGCTTTA
AATATAAAAAATTATATTTTATACCATATATATTTAAATTAATCAGATTGTAATATTGTG
GTAATAGACATGAAACAAAAATGAGAAAAATTTCCATAATTGGACCGTTTCAAAGCCGCA
AAAATATCATTTAGTATTTTTTCTAATTTGTACACCTCTAAACCGCGTCTCAAATTCCTA
TTTTTCCATTTCATACTAAAAAAACTTCCTTCATAAGAAAAATCCCCACATGTTACTTTA
ACATAATTTTTGTTTATATTATATATAAATATATAATCGTGATGTCCAGATCTATCTACT
ATCTTTTATTAATAGTTATTAAATAATTATATTTATTAAATTAGAATTAAATAATTATTT
TTAATTTACTTATATATAATTATAGAATTTTACTTTTATATATATTCATAATATTCTAAT
GCATATCTCTTATTATTTATCTCTGCTAAATTTAAATTACAAATTTTAAGAGAACCTCAA
TAGCTTTCCCCTTCCTTTGACCTTTCCCTAGCCCCCCAAATTTTTTTTACTACTTTATGG
TTATTTTAAATGTCCACAAAAAACATTTGCACCATAATATATTTGAGAAATTTCTTATTA
ACTTCCCTACCACATTCTTAATATATTTTCTTATAATTCAACCTTCGTCATTATCAAAAG
TTGCAACTGAGCTAGTTTCATTTGTTCCTATCCTCTAGTCTCTTCAACAACCATTAAAAA
AAACAAACTCTTATTGTGTTCAAATTTATAAGAGTTTATACTTCTCTTTCTTTTACTTGT
TTCTCATTGAAAGAGTGAGGAAACAAACAAGTGAAAGTGAAGTAGCCATGGGAAGAAAAC
TTGATGCTTTACTAGGAAGAAACTTTAAAACTAGTAAATTTAAGGCCACTGCAAATTTAG
CCATTTCCAGGGTTACTGTACTCAAGAACCAACGCCAAGCACGGTGCTCGATCGCGCGGT
CTGATGTAGTTCAGCTCTTAAACCTTGGGTACCATGAAAGAGCTCTTCTAAGGGTTGAGC
AAGTAATCAAGGAACAAAATATGTTGGATGTGTTTGACATGGTAGAAGGCTATTGTCTTC
TCACTATTGAAAGAATCAACCTTATTCAACAAGAGAAAATATGTCCTGAGGAATTGAAGG
AGGCGATATCGAGCTTGATTTTTGCAGCTTCAAGGTGTGGTGAATTCCCAGAACTTCAAG
AGCTTCGAGGTATCTTCACATCAAGATTTGGGAAAGAATTCGCTGCTCGTGCTGTTGAGT
TAAGAAACAATTGTGGAGTAAATACTAAGATGATACAAAAGCTGTCAACAAGGATGCCTA
GCTTAGAACAAAGAACCAAAGTGCTTAAGGAAATTGCTGCAGAGAATAACATTGTTTTGA
AAATTGAGGAAATAATGTTGGAAAATACAGAGGAGAAGGAGGTCACTGCGAAAAGGAAGG
ACGAGCCTGAAGATCACGAATCAGTTTTGCCTCAAGATGTAGACCATGAAGCTAGGAGAA
AATTTAAAGATGTAGAAGCTGCAGCTCAAGCAGCGTTTGAGTCTGCTGCTTATGCAGCAG
CAGCTGCAAGAGCAGCTGTGGAACTCTCTCGGTCTGAATCACGTGATACAGATGACCCCA
AGAGTCCGAGTCAAAAGCCAAGGGATGTATCGGACTCTCGTGAGGATTTGAAATCTGAGT
TTCATGCAGGAGAGGAGAAGAATAATGAGGGAGTTGAGAAAATCGAGACTAGTCAGAACT
ATGGTTTTCATTCTGAAGTCGATCAATTCTCAGATGGAGATGAAGTGGAAGAAGTCGAAC
AGAAGAAGTTTGAAAAACAGTCCAAGAGATCAGTCTCGGTTTCAAGTTCTGATATTTCAG
CAGACGACATTCTTGTTGATGAGGTGAAAAGTCCCAGACATGGTGTAATTTATGATGAAA
TAGATGAAGAAGTTGGGGAGGAAAACAGAATCCCGTCATTAAAACATCCTAAGAATGAAG
TTTTTGGTTCTCCGGTGCACCAAACAGGAAATGAGAAGGAGATTGAAGGATTTACAAAGC
AAGGTGCAGAAAAACTAGACATAAATAAGAAGCCAATATCAATGAGAACTAGGAAGAACT
ATCACTGGTGAACCAAGAATGGGTAGATGTTAAAGAAAAGGAGATCAAAAGGATTCGTAA
AGCAAGGTACAGAAAACCTATACATAAATAAGAAGCCAATATCGATGAGAACTAGAAAAA
ACTATCACTAGAGACCAAGGATGAATAACTGTTTTGCTGAGATTTTGCCAGTTGGTGCAT
ATATTGTGCTTAGTCAATATATCATAGCTGCATATTTTCTTTATCTTTGGAGATTTTGTG
AGTTTGCGGATATATTTTGATGCTTTTGTCAATATAATGTAGCTTCATATTCTGTTTGTT
TGATTATAAGCTCTAGACAGAAGCTGTGATATTTTATAATAATCAAAGCTACATCCAGAT
TCTTTTGATTCAAAACTTTACTGCTATGGTCTACTATTATCTGCTGTGAAAAAAGGGGTA
TAACTTGTGCAAAGTTCACTCTATCAGACACTAAAATATGCACAAATGAACAAACTGAGA
AGCCCA