Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009310.3.1
CDS Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

ATGGTTTCCGAAAGAAAATTGGCAAGTGCAATGGGTGGAAAAACAACAAGAGCATGTGAC
AATTGTATTAAAAAAAGGGCACGTTGGTATTGTCCGGCCGATGATGCATTTTTATGTCAA
AATTGTGACGCTTCCGTTCATTCGGCGAACCCTTTGGCACGTAGGCACGAAAGGGTTCGT
CTTAAAACATCATCACTAAAACAAACATCATCACCATCATCATCATCGGACGATTACTTT
CCCGATTTGGAAAGTCCGCTATCAATTTCATCAGTATCAGTGTCAGTGTCAGTCCCATCG
TGGCATCGCGGATTTACTAGGAAGGCACGGACTCCTAGGCAGGGGAGGAAGGCTAGTAAA
TCCGCGGGGGATGGAGATGTCATTCGAAAGAATCCTATTCATCTCGTCCCTGAGATATTA
AGCGATGAAAATTCACTTGATGAGAATGAAGAGGAGCAACTTTTATATCGAGTGCCCATC
CTCGATCCCTTCGTGGGCCACCTTTACAGCTCATCGACAGCACCAACAGATGCAGATTCA
GAGTTTAAACTCGAATCTAAGGAGATGACATTGCAAGATGATATCTGTAACGTCGACCTG
AATAGATTTCACGAGATGTTACCCTCGGAGATGGAGCTAGCGGAATTCGCAGCCGATGTT
GAGAGTTTGCTAGGTAAAGGACTTGATGATGAGTCATTTGATATGGAAGGATTAGGTCTA
TTAGGGGTTTGTAACAAGGAGGAAAATTCAATGATTAGTCATGAAAAAGTCAAAATTGAA
GATGAGGGAGAAATGGAAGTCGTTACAAAAACAACTTCTCCAACTACTCACAATCATCAA
TATAATCATACTCATGATCATGATATTGATATTAACGAAGACACCTTTGAGTTCAAATTC
GATTACGATTCGTCGATAAATATTATCGGAGACGATGAAGTAGTGACGAACGATGAAAAT
AAAAAGAAGATTTTATTAAATCTTGACTATGAAGGTGTATTAAAAGCATGGGCTGACCAA
AGGTGTCCTTGGACTAATGGTGAAAGGCCAGAATTGGATTCAAATGAATCATGGCCAGAT
TGCATGGGAAATTACATGGGAATAATGAACGAAAATGTAACAATAGTGGATAGAGGAAGA
GAAGCGAGAGTAACAAGGTACAGAGAAAAAAGACGAACAAGATTATTTTCGAAGAAAATA
AGATACGAAGTTAGGAAATTGAATGCCGAAAAGAGGCCAAGAATGAAAGGAAGATTTGTT
AAAAGGGCCAATTTTGTAACAACAAGCACTCCTAATTACCCTTTGGTCAAATGA

Peptide Sequence

PEP ID

Solyc05g009310.3.1
PEP Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

MVSERKLASAMGGKTTRACDNCIKKRARWYCPADDAFLCQNCDASVHSANPLARRHERVR
LKTSSLKQTSSPSSSSDDYFPDLESPLSISSVSVSVSVPSWHRGFTRKARTPRQGRKASK
SAGDGDVIRKNPIHLVPEILSDENSLDENEEEQLLYRVPILDPFVGHLYSSSTAPTDADS
EFKLESKEMTLQDDICNVDLNRFHEMLPSEMELAEFAADVESLLGKGLDDESFDMEGLGL
LGVCNKEENSMISHEKVKIEDEGEMEVVTKTTSPTTHNHQYNHTHDHDIDINEDTFEFKF
DYDSSINIIGDDEVVTNDENKKKILLNLDYEGVLKAWADQRCPWTNGERPELDSNESWPD
CMGNYMGIMNENVTIVDRGREARVTRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV
KRANFVTTSTPNYPLVK*

Transcript Sequence

Transcript ID

Solyc05g009310.3.1
Transcript Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

GTATCAGAGACGGATTCAGAATTTGTCGATGGTTTCCGAAAGAAAATTGGCAAGTGCAAT
GGGTGGAAAAACAACAAGAGCATGTGACAATTGTATTAAAAAAAGGGCACGTTGGTATTG
TCCGGCCGATGATGCATTTTTATGTCAAAATTGTGACGCTTCCGTTCATTCGGCGAACCC
TTTGGCACGTAGGCACGAAAGGGTTCGTCTTAAAACATCATCACTAAAACAAACATCATC
ACCATCATCATCATCGGACGATTACTTTCCCGATTTGGAAAGTCCGCTATCAATTTCATC
AGTATCAGTGTCAGTGTCAGTCCCATCGTGGCATCGCGGATTTACTAGGAAGGCACGGAC
TCCTAGGCAGGGGAGGAAGGCTAGTAAATCCGCGGGGGATGGAGATGTCATTCGAAAGAA
TCCTATTCATCTCGTCCCTGAGATATTAAGCGATGAAAATTCACTTGATGAGAATGAAGA
GGAGCAACTTTTATATCGAGTGCCCATCCTCGATCCCTTCGTGGGCCACCTTTACAGCTC
ATCGACAGCACCAACAGATGCAGATTCAGAGTTTAAACTCGAATCTAAGGAGATGACATT
GCAAGATGATATCTGTAACGTCGACCTGAATAGATTTCACGAGATGTTACCCTCGGAGAT
GGAGCTAGCGGAATTCGCAGCCGATGTTGAGAGTTTGCTAGGTAAAGGACTTGATGATGA
GTCATTTGATATGGAAGGATTAGGTCTATTAGGGGTTTGTAACAAGGAGGAAAATTCAAT
GATTAGTCATGAAAAAGTCAAAATTGAAGATGAGGGAGAAATGGAAGTCGTTACAAAAAC
AACTTCTCCAACTACTCACAATCATCAATATAATCATACTCATGATCATGATATTGATAT
TAACGAAGACACCTTTGAGTTCAAATTCGATTACGATTCGTCGATAAATATTATCGGAGA
CGATGAAGTAGTGACGAACGATGAAAATAAAAAGAAGATTTTATTAAATCTTGACTATGA
AGGTGTATTAAAAGCATGGGCTGACCAAAGGTGTCCTTGGACTAATGGTGAAAGGCCAGA
ATTGGATTCAAATGAATCATGGCCAGATTGCATGGGAAATTACATGGGAATAATGAACGA
AAATGTAACAATAGTGGATAGAGGAAGAGAAGCGAGAGTAACAAGGTACAGAGAAAAAAG
ACGAACAAGATTATTTTCGAAGAAAATAAGATACGAAGTTAGGAAATTGAATGCCGAAAA
GAGGCCAAGAATGAAAGGAAGATTTGTTAAAAGGGCCAATTTTGTAACAACAAGCACTCC
TAATTACCCTTTGGTCAAATGATTAATGTTAGTTTAATTTAATTTACATTTTTTTAACAC
CAGGTTTTTTGTA