Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009080.3.1
CDS Infomation

Polyketide cyclase/dehydrase and lipid transporter (AHRD V3.3 *** G7LFP8_MEDTR)
Sequence

ATGGGAGTAGAGAAAAATGTTGGATGTGAAGTGGAAGTTGTTTCGTGGAGAGAACGAAAG
ATTAAAGCTGAGATTTTGGTGAATGCTGATGTTGATTCTGTATGGAATGCTCTTACTGAT
TATGAAAGGCTTGCTGATTTCGTCCCGAATCTTGTTAGCAGTAGGAGAATCCCTTGTCCA
CGTCCTGGGCGTATTTGGTTGGAGCAAAGAGGTATCCAACGATCTCTCTATTGGCACATA
GAAGCTCGCGTTGTATTGGATCTCCAAGAATTCATTAAATCCGATAATGTTCGCGAGCTC
CATTTCTCTATGGTTGACGGTGACTTCAAGAAGTTTGAAGGCAAATGGTCAGTGAGAGTT
GGAACAAGGTCTTCAACGGCTATACTAAGTTATGAAGTTAGTGTCATACCGAGGTTCAAC
TTTCCAGCCATTTTCTTGGAGAGGATTATCAGGTCAGACCTCCCCGTAAATCTTCAAGCG
TTGTCCTGTAGAGCTGAAAACAGTTATCAAGGTTATCAGAATGTTACCAAAGAGGAACCT
GGTTCTTACCTTATTGATCATGTCATATCCCACGAAAATAAATCTTCGGGTGAACACTTG
AAGGAAAAGTTTGTCAAAGCCACTTTTGGCCCGTCGACACCAGTTACAAGTGACGTGACT
AATAATTGGGGAATATTTGGGAAAACTTGCAGACTTGACAAGCCATGTGTGGTGGATGAA
GTCCATCTCCGAAGATTTGATGGTCTACTGGAAAATGGAGGTGTTCATCGTTGCGTTGTT
GCTAGTATTACAGTAAAAGCTCCAGTTCGCGAAGTATGGAATGTTTTGACTGCTTATGAA
AGTCTTCCCGAGATAGTTCCGAATTTAGCAATCAGTAAGATCTTATCACGAGACAACAAC
AAAGTTCGCATTCTTCAGGAAGGATGCAAGGGTCTTCTATACATGGTTCTCCATGCACGT
GTCGTTCTAGACTTATCTGAACTCATAGAACAAGAAATTAGCTTTGAGCAGGTGGAAGGA
GATTTCGATTCTTTTGAAGGAAAATGGATCTTAGAGCAATTAGGCAGTCATCATACTCTG
TTGAAGTATAGTGTGGAGTCAAAAATGCACAAGAATTCGTTTCTTTCCGAAGCAATTATG
GAAGAGGTCATATACGAGGACCTTCCATCAAACTTATGTGCAATCCGAGATTACATTGAG
GAACGAGAGACAGAGAAACCTCTTGAAAAATTTAACCATGATGAATTCCGAGAGGCATCG
GTTAGTTCATCAATGAAGGATTCATCTGTTCATTATGATAGGCAAGCTGGGCAGAATTCA
GATAGTAGTAGTTTACATTCACCTAGACAAAGGCCGAAAGTTCCAGGGTTGCAGAGGGAT
ATTGAAGTTCTTAAAGCTGAGCTCTTGGATTTTATTTCCGAACATGGACAAGAAGGATTT
ATGCCTATGAGAAAGCAACTCAGAAAACATGGAAGAGTTGATATTGAAAAGGCGATTACA
CGTATGGGAGGTTTTAGAAGAATTTCTTCATTGATGAATCTATCTCTTGCTTACAAACAC
CGCAAACCAAAAGGTTATTGGGATAGCTTAGAAAATTTACAAGAGGAGATCAGTCGATTC
CAGAAGAACTGGGGAATGGATCTATCGTATATGCCTAGTAGAAAATCCTTCGAACGTGCA
GGCCGATATGATATTGCTCGTGCGTTAGAAAAATGGGGCGGCCTTCATGAAGTTTCGCGT
CTTCTGTCACTTAAGGTAAGGCATCCTAACAGACAAGCAAGCTTTGCCAAAGAGAAGAAA
GTTGAATTATTAGCTAATGATGTAAATTGTGAAACGACATCGTCTAAACCTTTTGTTGCA
CAAGATGCAAAGAAATGGCTCATGAAACTCAAGGACTTGGACATAAATTGGGTGGAATGA

Peptide Sequence

PEP ID

Solyc05g009080.3.1
PEP Infomation

Polyketide cyclase/dehydrase and lipid transporter (AHRD V3.3 *** G7LFP8_MEDTR)
Sequence

MGVEKNVGCEVEVVSWRERKIKAEILVNADVDSVWNALTDYERLADFVPNLVSSRRIPCP
RPGRIWLEQRGIQRSLYWHIEARVVLDLQEFIKSDNVRELHFSMVDGDFKKFEGKWSVRV
GTRSSTAILSYEVSVIPRFNFPAIFLERIIRSDLPVNLQALSCRAENSYQGYQNVTKEEP
GSYLIDHVISHENKSSGEHLKEKFVKATFGPSTPVTSDVTNNWGIFGKTCRLDKPCVVDE
VHLRRFDGLLENGGVHRCVVASITVKAPVREVWNVLTAYESLPEIVPNLAISKILSRDNN
KVRILQEGCKGLLYMVLHARVVLDLSELIEQEISFEQVEGDFDSFEGKWILEQLGSHHTL
LKYSVESKMHKNSFLSEAIMEEVIYEDLPSNLCAIRDYIEERETEKPLEKFNHDEFREAS
VSSSMKDSSVHYDRQAGQNSDSSSLHSPRQRPKVPGLQRDIEVLKAELLDFISEHGQEGF
MPMRKQLRKHGRVDIEKAITRMGGFRRISSLMNLSLAYKHRKPKGYWDSLENLQEEISRF
QKNWGMDLSYMPSRKSFERAGRYDIARALEKWGGLHEVSRLLSLKVRHPNRQASFAKEKK
VELLANDVNCETTSSKPFVAQDAKKWLMKLKDLDINWVE*

Transcript Sequence

Transcript ID

Solyc05g009080.3.1
Transcript Infomation

Polyketide cyclase/dehydrase and lipid transporter (AHRD V3.3 *** G7LFP8_MEDTR)
Sequence

ATCATCAATTTGTTCATGGAAATCGAGTTTTTCATCTTCGGACTATGTTAAATTTGATTC
GAAGAATGAGAATTTTAGAATTTACTATTATAGAAAAGGGGATTTTTTAGGAGGAGATGC
AATGGGAGTAGAGAAAAATGTTGGATGTGAAGTGGAAGTTGTTTCGTGGAGAGAACGAAA
GATTAAAGCTGAGATTTTGGTGAATGCTGATGTTGATTCTGTATGGAATGCTCTTACTGA
TTATGAAAGGCTTGCTGATTTCGTCCCGAATCTTGTTAGCAGTAGGAGAATCCCTTGTCC
ACGTCCTGGGCGTATTTGGTTGGAGCAAAGAGGTATCCAACGATCTCTCTATTGGCACAT
AGAAGCTCGCGTTGTATTGGATCTCCAAGAATTCATTAAATCCGATAATGTTCGCGAGCT
CCATTTCTCTATGGTTGACGGTGACTTCAAGAAGTTTGAAGGCAAATGGTCAGTGAGAGT
TGGAACAAGGTCTTCAACGGCTATACTAAGTTATGAAGTTAGTGTCATACCGAGGTTCAA
CTTTCCAGCCATTTTCTTGGAGAGGATTATCAGGTCAGACCTCCCCGTAAATCTTCAAGC
GTTGTCCTGTAGAGCTGAAAACAGTTATCAAGGTTATCAGAATGTTACCAAAGAGGAACC
TGGTTCTTACCTTATTGATCATGTCATATCCCACGAAAATAAATCTTCGGGTGAACACTT
GAAGGAAAAGTTTGTCAAAGCCACTTTTGGCCCGTCGACACCAGTTACAAGTGACGTGAC
TAATAATTGGGGAATATTTGGGAAAACTTGCAGACTTGACAAGCCATGTGTGGTGGATGA
AGTCCATCTCCGAAGATTTGATGGTCTACTGGAAAATGGAGGTGTTCATCGTTGCGTTGT
TGCTAGTATTACAGTAAAAGCTCCAGTTCGCGAAGTATGGAATGTTTTGACTGCTTATGA
AAGTCTTCCCGAGATAGTTCCGAATTTAGCAATCAGTAAGATCTTATCACGAGACAACAA
CAAAGTTCGCATTCTTCAGGAAGGATGCAAGGGTCTTCTATACATGGTTCTCCATGCACG
TGTCGTTCTAGACTTATCTGAACTCATAGAACAAGAAATTAGCTTTGAGCAGGTGGAAGG
AGATTTCGATTCTTTTGAAGGAAAATGGATCTTAGAGCAATTAGGCAGTCATCATACTCT
GTTGAAGTATAGTGTGGAGTCAAAAATGCACAAGAATTCGTTTCTTTCCGAAGCAATTAT
GGAAGAGGTCATATACGAGGACCTTCCATCAAACTTATGTGCAATCCGAGATTACATTGA
GGAACGAGAGACAGAGAAACCTCTTGAAAAATTTAACCATGATGAATTCCGAGAGGCATC
GGTTAGTTCATCAATGAAGGATTCATCTGTTCATTATGATAGGCAAGCTGGGCAGAATTC
AGATAGTAGTAGTTTACATTCACCTAGACAAAGGCCGAAAGTTCCAGGGTTGCAGAGGGA
TATTGAAGTTCTTAAAGCTGAGCTCTTGGATTTTATTTCCGAACATGGACAAGAAGGATT
TATGCCTATGAGAAAGCAACTCAGAAAACATGGAAGAGTTGATATTGAAAAGGCGATTAC
ACGTATGGGAGGTTTTAGAAGAATTTCTTCATTGATGAATCTATCTCTTGCTTACAAACA
CCGCAAACCAAAAGGTTATTGGGATAGCTTAGAAAATTTACAAGAGGAGATCAGTCGATT
CCAGAAGAACTGGGGAATGGATCTATCGTATATGCCTAGTAGAAAATCCTTCGAACGTGC
AGGCCGATATGATATTGCTCGTGCGTTAGAAAAATGGGGCGGCCTTCATGAAGTTTCGCG
TCTTCTGTCACTTAAGGTAAGGCATCCTAACAGACAAGCAAGCTTTGCCAAAGAGAAGAA
AGTTGAATTATTAGCTAATGATGTAAATTGTGAAACGACATCGTCTAAACCTTTTGTTGC
ACAAGATGCAAAGAAATGGCTCATGAAACTCAAGGACTTGGACATAAATTGGGTGGAATG
AGTATTGAGTTTTGTTTCACTTTCTTCTAAAAGCATGACAACAACTAATTGTAGCGAGTG
TATATATATCAATCAAGTATGTTTCGATTCCACACTAGTTTGAG