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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g009030.3.1
CDS Infomation

3-isopropylmalate dehydrogenase (AHRD V3.3 *** K4BX77_SOLLC)
Sequence

ATGGCGGCTTCTTCTTCTTCTTTACAATTCACTGCAACTCCTTTTAACCAATTTCATTCC
AAAAAAGTACCCAAACACGCCACTAAATGGGGTACTATTCGCTGTTCCGCTTCTTCACCC
AGCAAAAGCTACAACATTACTCTTCTTCCCGGCGATGGTATTGGACCTGAAGTAATTTCT
GTTGCCAAAAATGCCCTCCAACTTGTCTCCTCCATTGAAGGATTTGAAGTTGCATTCGAG
GAGATGCCAATGGGAGGGGCTGCATTGGATGCTGTAGGGGTACCATTGCCTGATGAGACT
CTTAATTCTGCAAAGAAATCTGATGCTACTCTTCTTGGAGCAATTGGAGGATATAAATGG
GACAAAAATGAAAAACATTTGAAGCCCGAGACTGGATTGCTTCAACTTCGAGAAGGTTTG
CAGGTCTTTGCTAACTTGAGACCAGCCACTGTTTTACCACAGTTAGTAGATGCTTCAACT
TTGAAGAAAGAAGTTGCTGAAGGTGTAGACCTAATGGTTGTTAGGGAACTTACTGGAGGT
ATTTATTTTGGCAAACCAAGAGGATTCAGCACTGATAAAAATGGTCAGGAAATAGGTTTC
AACACTGAAGTGTATGCAGCATATGAGATCGAAAGAATTGCTCGTATTGCATTTGAAACT
GCAAGGAAGCGAAGAGGAAAACTATGTAGCGTGGATAAAGCAAATGTATTGGAGGCCTCT
ATGCTTTGGAGGAAGATAGTTACAGCGTTAGCCTCAGAGTATCCTGATGTAGAGCTCTCT
CACATGTATGTTGATAATGCAGCCATGCAACTTGTTCGCAACCCAAAACAGTTTGATACA
ATTGTGACAAACAACATATTTGGTGACATCCTGTCCGATGAAGCATCAATGATTACAGGA
AGTATCGGGATGCTTCCATCTGCCAGTCTTGGTGCAGCGGGACCTGGATTATTTGAACCT
ATACATGGTTCTGCTCCTGATATTGCTGGGCAGGATAAAGCAAACCCTTTGGCAACAATG
CTCAGTGCTGCTATGCTTCTGAAGTATGGCCTAGGTGAGGAGAAGGCTGCTCAGAGAATT
GAAGCAGCTGTTTTAGACACCTTAAATCGAGGATTCCGTACTGGTGACATTCACTCAGCA
GGACATAAATTGGTCGGATGCAAGGAAATGGGTGAAGAAGTGCTCAAGTCTATCGACAGC
AAAACTCCTGCTGCTGTTTAA

Peptide Sequence

PEP ID

Solyc05g009030.3.1
PEP Infomation

3-isopropylmalate dehydrogenase (AHRD V3.3 *** K4BX77_SOLLC)
Sequence

MAASSSSLQFTATPFNQFHSKKVPKHATKWGTIRCSASSPSKSYNITLLPGDGIGPEVIS
VAKNALQLVSSIEGFEVAFEEMPMGGAALDAVGVPLPDETLNSAKKSDATLLGAIGGYKW
DKNEKHLKPETGLLQLREGLQVFANLRPATVLPQLVDASTLKKEVAEGVDLMVVRELTGG
IYFGKPRGFSTDKNGQEIGFNTEVYAAYEIERIARIAFETARKRRGKLCSVDKANVLEAS
MLWRKIVTALASEYPDVELSHMYVDNAAMQLVRNPKQFDTIVTNNIFGDILSDEASMITG
SIGMLPSASLGAAGPGLFEPIHGSAPDIAGQDKANPLATMLSAAMLLKYGLGEEKAAQRI
EAAVLDTLNRGFRTGDIHSAGHKLVGCKEMGEEVLKSIDSKTPAAV*

Transcript Sequence

Transcript ID

Solyc05g009030.3.1
Transcript Infomation

3-isopropylmalate dehydrogenase (AHRD V3.3 *** K4BX77_SOLLC)
Sequence

ATTCCCCAAATTCAGTTTGCTTCAGCTCACATTCTTCATCAATGGCGGCTTCTTCTTCTT
CTTTACAATTCACTGCAACTCCTTTTAACCAATTTCATTCCAAAAAAGTACCCAAACACG
CCACTAAATGGGGTACTATTCGCTGTTCCGCTTCTTCACCCAGCAAAAGCTACAACATTA
CTCTTCTTCCCGGCGATGGTATTGGACCTGAAGTAATTTCTGTTGCCAAAAATGCCCTCC
AACTTGTCTCCTCCATTGAAGGATTTGAAGTTGCATTCGAGGAGATGCCAATGGGAGGGG
CTGCATTGGATGCTGTAGGGGTACCATTGCCTGATGAGACTCTTAATTCTGCAAAGAAAT
CTGATGCTACTCTTCTTGGAGCAATTGGAGGATATAAATGGGACAAAAATGAAAAACATT
TGAAGCCCGAGACTGGATTGCTTCAACTTCGAGAAGGTTTGCAGGTCTTTGCTAACTTGA
GACCAGCCACTGTTTTACCACAGTTAGTAGATGCTTCAACTTTGAAGAAAGAAGTTGCTG
AAGGTGTAGACCTAATGGTTGTTAGGGAACTTACTGGAGGTATTTATTTTGGCAAACCAA
GAGGATTCAGCACTGATAAAAATGGTCAGGAAATAGGTTTCAACACTGAAGTGTATGCAG
CATATGAGATCGAAAGAATTGCTCGTATTGCATTTGAAACTGCAAGGAAGCGAAGAGGAA
AACTATGTAGCGTGGATAAAGCAAATGTATTGGAGGCCTCTATGCTTTGGAGGAAGATAG
TTACAGCGTTAGCCTCAGAGTATCCTGATGTAGAGCTCTCTCACATGTATGTTGATAATG
CAGCCATGCAACTTGTTCGCAACCCAAAACAGTTTGATACAATTGTGACAAACAACATAT
TTGGTGACATCCTGTCCGATGAAGCATCAATGATTACAGGAAGTATCGGGATGCTTCCAT
CTGCCAGTCTTGGTGCAGCGGGACCTGGATTATTTGAACCTATACATGGTTCTGCTCCTG
ATATTGCTGGGCAGGATAAAGCAAACCCTTTGGCAACAATGCTCAGTGCTGCTATGCTTC
TGAAGTATGGCCTAGGTGAGGAGAAGGCTGCTCAGAGAATTGAAGCAGCTGTTTTAGACA
CCTTAAATCGAGGATTCCGTACTGGTGACATTCACTCAGCAGGACATAAATTGGTCGGAT
GCAAGGAAATGGGTGAAGAAGTGCTCAAGTCTATCGACAGCAAAACTCCTGCTGCTGTTT
AATTTTCTTAAGAGGAGGCTTCATTGAGACCTCAACAAATGATCATTTTGGCAGATGCAT
TTGCAGTCAGTATATAATTTGCCATTTATGCAACTGTTTGAAGGATTCAAAATTGCTGAG
TGTTGTATCGTAGCCTAAACGTCTCGATTCTTTTCTCTGATGTTTTTGAGACATTATCCT
GTTGTAACATGAAGT