Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g008560.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SJZ3_RICCO)
Sequence	ATGACCCTTTATGTTAGAGCTTCTAAATTCATCATACCTAAATCAAATCTCAATCATTTC AGTTTTTTCGTATTTTCTTCTCTTAAAAGATTGATTTTTTATTCATCATTACATCAGTTT CAATGCCCATCTAAGATAAAAATCAATAATATTACAAGGACTGGTAGTAATAATGGTGGC AATGGCATTCGAGAGAATCCCTTTACAGATTCTGATATTCAGAGATTAATTTTGAATAAG ATTGAAGAAAGGGGCTGGGTTACTGGGGAGGAATTTTGGGTTGTTCCAGATTGTTTTCAT TCTTTAATTTATGATTCTGATTTGTTGGTTAAGATTCTTAGCTCAATTCGTTGTCGACCA AGGGTTGCATTGAGATTGTTTAGGTGGGCTGAAGGGCAAAAGGGATTCAAGTATTCAGAG TTTACTTTTTGTACTATTCTTGATATTTTAATACAGAATGGTTGGGTAAAGTCTGCTTAT TGGGTGGTAGAAAGGGTGATTAGTAGTAATATGCATAAAGTTGTTGATTTATTGGTTGAT GGGTATTTGAATTTGAAGGTTTCTGTTGAGATACTTAATCTTTTTTTGAGAATATACACG AAGAACGCAAATGTGGACCAGTGCTTGTTAGTTTTCCAGAAGATGCTGAGGAATGAGATG ATGCCTGATGTGAAGAATTGTAATAGGATTCTAAGGAACTTAAGAGATAGAAATTTAGTT GCCAAGGCGAGAGAAGTGTATAAGATGATGGGTGAATTTGGGATTATGTCTACTATTATT ACTTATAATACAATGTTGGATTTGTTTTGTAGAGAAGGTGAAGTAGAACAGGCTTTGGAT CTTTTATCAGAAATGGAGAGAAGGGAGTGCTATCCAAATGATGTAACATACAATATCTTG ATTAATGGGTTATCAAAGAAAGGGGAGTTTAACCATGCTAGAGGTTTGATTGGAGAGATG TTGAATAAAGGACTGAGGGTTTCAGCTCATACATATAATCCTCTAATTTATGGTTACTGT ATTAAGGGAATGGTTGTGGAGGCATTGAGTCTCGGAGAAGAGATGGAAGTAAGAGGAGTT TCACCTACTGTCTCAACATATAATACATTTATTTATGCTCTTTGCCGGCAGGGGCAAGCT AGTGAAGCAAGATACTGGTTTTCTGTCATGCTGAAGAAGAATTTGGTGCCGGACATAATG TCATACAACCCTTTGATTTACGGATACTGTCGGTTGGGGGATATTGATGAGGCCTTTTCC TTATTACATGATTTAAGGAGCAGGGGACTTTTTCCTACAGTGATCACCTACAATACAATT ATGGATGGACTCTGTAAAAAAGGTAATTTAGAGGATGCTAAGCAGATGAAAGAAGAAATG ATGAGACATGGTATATCTCCTGATGTATTTACTTATACTATTCTGGTTCATGGTTCCTGC AAGGCAGGAAATTTACCAATGGCAAAAGAACTATTTGATGAGATGTTACAGAGGGGTTTG GAGCCTGACTGCATTGCTTACACAACTCTAATAGCAGGTGTACTGAGCCTGGGTGACATA TTGAACGCATGCAAACTACAAGAGGAAATGTCAACAAAGGGATTCCCACCAAATATAATA ATCTACAATGTATTTGTGGATGGTATTGCGAAGCTGGGTAATCTTGAAGAAGCAACTGAG TTGTTACAGAAGATGGTTGGGGATGGCCTTATGCCTGATCACGTAACATATACCAGTATA ATTCATGCCTACCTCGAATTTGGGAACCTTAAGAAAGCCAGAGAGTTGTTTGATGAGATG ATAAGTAAAGACATATCTCCGACAGTTGTAACATACACAGTGCTGATTCATGCGCATGCC GGTAAAGGGAGGCTTGAACTTGCACATATGTATTTTTCAGAGATGCAACAGAAGAGCATT CTGCCAAATGTGATTACCTACAATGCGCTAATAAATGGCCTTTGCAAGTACAGAAGAATA AACGAGGCTTACAGTTACTTTGCTGAAATGAAAACAAGAGGAATTATCCCTAATAAATAT ACCTACACCATTTTGATAAATGAGAACTGTGATTTGGGTAACTGGCAAGAGGTTTTGAGA CTGTTCAAAGAAATGTTGGATGACGGAATCCAGCCTGATTCTTTTACATACAGTGCGATG TTGAAAAATCTCGGAAGAGATTATAAATCACATGCCATAGAATACCTTGACTTTATACTT TTGGGTGATGAAAGCGATGAAGGCACTGCCGAAGCAAAAAGTTGA

Peptide Sequence

PEP ID	Solyc05g008560.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SJZ3_RICCO)
Sequence	MTLYVRASKFIIPKSNLNHFSFFVFSSLKRLIFYSSLHQFQCPSKIKINNITRTGSNNGG NGIRENPFTDSDIQRLILNKIEERGWVTGEEFWVVPDCFHSLIYDSDLLVKILSSIRCRP RVALRLFRWAEGQKGFKYSEFTFCTILDILIQNGWVKSAYWVVERVISSNMHKVVDLLVD GYLNLKVSVEILNLFLRIYTKNANVDQCLLVFQKMLRNEMMPDVKNCNRILRNLRDRNLV AKAREVYKMMGEFGIMSTIITYNTMLDLFCREGEVEQALDLLSEMERRECYPNDVTYNIL INGLSKKGEFNHARGLIGEMLNKGLRVSAHTYNPLIYGYCIKGMVVEALSLGEEMEVRGV SPTVSTYNTFIYALCRQGQASEARYWFSVMLKKNLVPDIMSYNPLIYGYCRLGDIDEAFS LLHDLRSRGLFPTVITYNTIMDGLCKKGNLEDAKQMKEEMMRHGISPDVFTYTILVHGSC KAGNLPMAKELFDEMLQRGLEPDCIAYTTLIAGVLSLGDILNACKLQEEMSTKGFPPNII IYNVFVDGIAKLGNLEEATELLQKMVGDGLMPDHVTYTSIIHAYLEFGNLKKARELFDEM ISKDISPTVVTYTVLIHAHAGKGRLELAHMYFSEMQQKSILPNVITYNALINGLCKYRRI NEAYSYFAEMKTRGIIPNKYTYTILINENCDLGNWQEVLRLFKEMLDDGIQPDSFTYSAM LKNLGRDYKSHAIEYLDFILLGDESDEGTAEAKS*

Transcript Sequence

Transcript ID	Solyc05g008560.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SJZ3_RICCO)
Sequence	ATGACCCTTTATGTTAGAGCTTCTAAATTCATCATACCTAAATCAAATCTCAATCATTTC AGTTTTTTCGTATTTTCTTCTCTTAAAAGATTGATTTTTTATTCATCATTACATCAGTTT CAATGCCCATCTAAGATAAAAATCAATAATATTACAAGGACTGGTAGTAATAATGGTGGC AATGGCATTCGAGAGAATCCCTTTACAGATTCTGATATTCAGAGATTAATTTTGAATAAG ATTGAAGAAAGGGGCTGGGTTACTGGGGAGGAATTTTGGGTTGTTCCAGATTGTTTTCAT TCTTTAATTTATGATTCTGATTTGTTGGTTAAGATTCTTAGCTCAATTCGTTGTCGACCA AGGGTTGCATTGAGATTGTTTAGGTGGGCTGAAGGGCAAAAGGGATTCAAGTATTCAGAG TTTACTTTTTGTACTATTCTTGATATTTTAATACAGAATGGTTGGGTAAAGTCTGCTTAT TGGGTGGTAGAAAGGGTGATTAGTAGTAATATGCATAAAGTTGTTGATTTATTGGTTGAT GGGTATTTGAATTTGAAGGTTTCTGTTGAGATACTTAATCTTTTTTTGAGAATATACACG AAGAACGCAAATGTGGACCAGTGCTTGTTAGTTTTCCAGAAGATGCTGAGGAATGAGATG ATGCCTGATGTGAAGAATTGTAATAGGATTCTAAGGAACTTAAGAGATAGAAATTTAGTT GCCAAGGCGAGAGAAGTGTATAAGATGATGGGTGAATTTGGGATTATGTCTACTATTATT ACTTATAATACAATGTTGGATTTGTTTTGTAGAGAAGGTGAAGTAGAACAGGCTTTGGAT CTTTTATCAGAAATGGAGAGAAGGGAGTGCTATCCAAATGATGTAACATACAATATCTTG ATTAATGGGTTATCAAAGAAAGGGGAGTTTAACCATGCTAGAGGTTTGATTGGAGAGATG TTGAATAAAGGACTGAGGGTTTCAGCTCATACATATAATCCTCTAATTTATGGTTACTGT ATTAAGGGAATGGTTGTGGAGGCATTGAGTCTCGGAGAAGAGATGGAAGTAAGAGGAGTT TCACCTACTGTCTCAACATATAATACATTTATTTATGCTCTTTGCCGGCAGGGGCAAGCT AGTGAAGCAAGATACTGGTTTTCTGTCATGCTGAAGAAGAATTTGGTGCCGGACATAATG TCATACAACCCTTTGATTTACGGATACTGTCGGTTGGGGGATATTGATGAGGCCTTTTCC TTATTACATGATTTAAGGAGCAGGGGACTTTTTCCTACAGTGATCACCTACAATACAATT ATGGATGGACTCTGTAAAAAAGGTAATTTAGAGGATGCTAAGCAGATGAAAGAAGAAATG ATGAGACATGGTATATCTCCTGATGTATTTACTTATACTATTCTGGTTCATGGTTCCTGC AAGGCAGGAAATTTACCAATGGCAAAAGAACTATTTGATGAGATGTTACAGAGGGGTTTG GAGCCTGACTGCATTGCTTACACAACTCTAATAGCAGGTGTACTGAGCCTGGGTGACATA TTGAACGCATGCAAACTACAAGAGGAAATGTCAACAAAGGGATTCCCACCAAATATAATA ATCTACAATGTATTTGTGGATGGTATTGCGAAGCTGGGTAATCTTGAAGAAGCAACTGAG TTGTTACAGAAGATGGTTGGGGATGGCCTTATGCCTGATCACGTAACATATACCAGTATA ATTCATGCCTACCTCGAATTTGGGAACCTTAAGAAAGCCAGAGAGTTGTTTGATGAGATG ATAAGTAAAGACATATCTCCGACAGTTGTAACATACACAGTGCTGATTCATGCGCATGCC GGTAAAGGGAGGCTTGAACTTGCACATATGTATTTTTCAGAGATGCAACAGAAGAGCATT CTGCCAAATGTGATTACCTACAATGCGCTAATAAATGGCCTTTGCAAGTACAGAAGAATA AACGAGGCTTACAGTTACTTTGCTGAAATGAAAACAAGAGGAATTATCCCTAATAAATAT ACCTACACCATTTTGATAAATGAGAACTGTGATTTGGGTAACTGGCAAGAGGTTTTGAGA CTGTTCAAAGAAATGTTGGATGACGGAATCCAGCCTGATTCTTTTACATACAGTGCGATG TTGAAAAATCTCGGAAGAGATTATAAATCACATGCCATAGAATACCTTGACTTTATACTT TTGGGTGATGAAAGCGATGAAGGCACTGCCGAAGCAAAAAGTTGA