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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g008540.3.1
CDS Infomation

Origin recognition complex subunit 4 (AHRD V3.3 *** K4BX28_SOLLC)
Sequence

ATGGGTGTCGAGAATCCAGCAGAACAAGCTCAGATTCTGCTCAGAACAAGGCTTTGTAAT
CCCAATTTTATTTACACCATTTTTTCTGATTCCCCAGATAGCAATTACAGCAAATTGAAG
TACATAATGTCAAGTTCAGTAACTGAAGCATGTAACAACTCAGCTCTACTTCTTGGCCCT
CGTGGTTGCGGAAAAGTTGCGATTTTAGAGATGGTTATCAAGGATTTACTGCAAGAATAT
CCAGACACTATCTGTGTGATTAAACTGAATGGACTATTGCATAGCGAGGACAATTGTGCG
TTGAAGGAAATTGCAAGGCAATTATGTATAGAAAATCAATTGGTTTTCTCAAAGATGGCA
TCATTTGATGATAACTCCCAGTTTGTGATAGCCATGTTAAGGGAGTGTGGATTGGCACAT
AAAACAATTATCTTTGTGTTGGATGAATTTGACCTTTTTACCCAGGGTAAACAACGATTA
CTCTATAGCTTGCTAGATGCAATGCAGTCTGTAACTTCGCAAGCTGTTGTCGTTGGTGTG
AGTTGCAGATTGGATGCTGATCAACTCTTAGAGAAGAGAGTAAGGTCTCGTTTCTCGCAT
AGAAAGCTGTTGTTCCTACCCCCTTCACAGGAAGACTTGCAAAAAATTTTGCAGCATGCT
TTACTACTGCCAACAGAATCAAGCCTTTCTCCTCAATACGTGGCTGCTTATAACAAAAAG
CTTCTTAATACTTTGTCGGATGACAAATTCAAAGACATCATTGATTCATTATGCAATTTT
GATGCAACCTTTAACCATCTATTGAGATTTCTGTTTGCGTCTGTGAGCCATATGGATACA
AAATCTGGATTTTTGTCACTTGATAACTTTAAAACATCCCTATCAAGTATTCAACGGCAA
CCCAAGTTGGAAGCCTTGCAAGATTGCACCATTTTAGAGCTATATATACTTGTCTGCTTG
AGGAGGTTGGAAGGCAAAGAGCAAGAGACTACTAACTTCAATTCAGTAATGAAAGAGTAC
AAAGACGTACATAATTCGTTCCAAACATCAGACTATTATGCACGGAATGTATGCCTCCGG
GCATTTGAACATCTTTTACAACGCCAATTGATCTCCTTGGTTGACAACAGAGGGCACAGC
CAATCTCTTGAGTTTCGTCCGGTGAAGCTTTTGATCTCATCACATGAATTACATCAGGGA
CTGAAAGCATACCGTTCCTGTCCAGCAATTCTTCATAAACTACTTGGCCTTACAGTGTGA

Peptide Sequence

PEP ID

Solyc05g008540.3.1
PEP Infomation

Origin recognition complex subunit 4 (AHRD V3.3 *** K4BX28_SOLLC)
Sequence

MGVENPAEQAQILLRTRLCNPNFIYTIFSDSPDSNYSKLKYIMSSSVTEACNNSALLLGP
RGCGKVAILEMVIKDLLQEYPDTICVIKLNGLLHSEDNCALKEIARQLCIENQLVFSKMA
SFDDNSQFVIAMLRECGLAHKTIIFVLDEFDLFTQGKQRLLYSLLDAMQSVTSQAVVVGV
SCRLDADQLLEKRVRSRFSHRKLLFLPPSQEDLQKILQHALLLPTESSLSPQYVAAYNKK
LLNTLSDDKFKDIIDSLCNFDATFNHLLRFLFASVSHMDTKSGFLSLDNFKTSLSSIQRQ
PKLEALQDCTILELYILVCLRRLEGKEQETTNFNSVMKEYKDVHNSFQTSDYYARNVCLR
AFEHLLQRQLISLVDNRGHSQSLEFRPVKLLISSHELHQGLKAYRSCPAILHKLLGLTV*

Transcript Sequence

Transcript ID

Solyc05g008540.3.1
Transcript Infomation

Origin recognition complex subunit 4 (AHRD V3.3 *** K4BX28_SOLLC)
Sequence

ATAAAAGATCAAGGAAAGCAGTGAAATTTTTTGCTAAATCAGCCCAAAACCTCTTTTTGA
GTAGCAGGCCTTCTCTTCTCAAAACAGGCCCAGGCCCAGGCCCAATCCAAGGGGCATCTC
TTGCCACAGCACAAAATGATCCTTCACTCTCACAATTCACTTTTTTCCCGCCAAAATTTT
CTCCTCCGCCATTTTTCTCTCCCAAAATTCCCTCTGTGATAGCAAATATGGGTGTCGAGA
ATCCAGCAGAACAAGCTCAGATTCTGCTCAGAACAAGGCTTTGTAATCCCAATTTTATTT
ACACCATTTTTTCTGATTCCCCAGATAGCAATTACAGCAAATTGAAGTACATAATGTCAA
GTTCAGTAACTGAAGCATGTAACAACTCAGCTCTACTTCTTGGCCCTCGTGGTTGCGGAA
AAGTTGCGATTTTAGAGATGGTTATCAAGGATTTACTGCAAGAATATCCAGACACTATCT
GTGTGATTAAACTGAATGGACTATTGCATAGCGAGGACAATTGTGCGTTGAAGGAAATTG
CAAGGCAATTATGTATAGAAAATCAATTGGTTTTCTCAAAGATGGCATCATTTGATGATA
ACTCCCAGTTTGTGATAGCCATGTTAAGGGAGTGTGGATTGGCACATAAAACAATTATCT
TTGTGTTGGATGAATTTGACCTTTTTACCCAGGGTAAACAACGATTACTCTATAGCTTGC
TAGATGCAATGCAGTCTGTAACTTCGCAAGCTGTTGTCGTTGGTGTGAGTTGCAGATTGG
ATGCTGATCAACTCTTAGAGAAGAGAGTAAGGTCTCGTTTCTCGCATAGAAAGCTGTTGT
TCCTACCCCCTTCACAGGAAGACTTGCAAAAAATTTTGCAGCATGCTTTACTACTGCCAA
CAGAATCAAGCCTTTCTCCTCAATACGTGGCTGCTTATAACAAAAAGCTTCTTAATACTT
TGTCGGATGACAAATTCAAAGACATCATTGATTCATTATGCAATTTTGATGCAACCTTTA
ACCATCTATTGAGATTTCTGTTTGCGTCTGTGAGCCATATGGATACAAAATCTGGATTTT
TGTCACTTGATAACTTTAAAACATCCCTATCAAGTATTCAACGGCAACCCAAGTTGGAAG
CCTTGCAAGATTGCACCATTTTAGAGCTATATATACTTGTCTGCTTGAGGAGGTTGGAAG
GCAAAGAGCAAGAGACTACTAACTTCAATTCAGTAATGAAAGAGTACAAAGACGTACATA
ATTCGTTCCAAACATCAGACTATTATGCACGGAATGTATGCCTCCGGGCATTTGAACATC
TTTTACAACGCCAATTGATCTCCTTGGTTGACAACAGAGGGCACAGCCAATCTCTTGAGT
TTCGTCCGGTGAAGCTTTTGATCTCATCACATGAATTACATCAGGGACTGAAAGCATACC
GTTCCTGTCCAGCAATTCTTCATAAACTACTTGGCCTTACAGTGTGAAATCAAAGCCCCA
TATGTTGTATTATTTTATCAGATTTTTTTATTTTGTTGTGAAATTAGAGTAATTTCAATA
TAAAAGAATTATACAATTTCCATAATGTGCCAAAAATTGCAATAAATTAGTTATTAATTT
AAATTTTTTCAT