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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g008420.3.1
CDS Infomation

Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A0B2PGQ7_GLYSO)
Sequence

ATGAGCATTCCAACCGGAGAAGTCGCCGGAGAGGACTTGTTTGCACAGGCAACTGCAGCC
GCCGATGACCTTTATAATTTTCGCGACAACTGTTTCCGCTTAACTTCGGAGGAGAGAGAC
TCCAAATTGCAAAGCCAATCTGATCTAGCTCTTCAAATCCTCGATAAAATTCCTATAGAA
AAGAGGAAATTGCCACTTCAACGTGCAACCTCTGAGTATCTAAGAGGGAAAATACTGGAT
GCAGTTCCTGTGTATAAGAAGGAAGCTGAGGATCATCTGTCTAAAGCTGTTAAGTTGAAT
CCATCTCTTGTGGATGCTTGGCTGTGTCTGGGTAACTGCATTTGGAAGAAAGGAGATTTA
AATGCAGCTAAAAACTGCTTTATGTTTGCTCTTGGCAAGGGTCCAAATAAGAAGATTCTA
TGTCAACTATCAATGCTTGAAAGGAAACTGTCTCATGATGCTGAAAATCCAGAAGAAATT
GTTGATGAAAGCATCAAACATGCCAGGGAAGCAATCGCTTTGGATGTCAAGGATGGATAT
TCTTGGTATAACCTAGGAAATGCATTTCTCATTTCTTTTTTTGTGACTGGATCATGGGAC
CACAGCAAGCTTCTACAGTCATTAAAAGCATACCAGAATGCTGAGAGAGATGAAAAAATG
AAGTCAAATCCTGATCTGTACTACAGTTGTGCCACTGTGAACAAATATCTGGAGAATTAT
GAGAGAGCCCTTACTGGATTTGAAGCTGCTGCATTAATGGATCCTGGTCTTAGTGCTATG
GAGGATGCACAAATGATAGTTCTGCTTCTTGATAAATTAGACTATTTGCTTCGGGGTCAG
ACTAAGGCTAAGCGGCTTTCTTCCCTATCATCATCGCTTGCTACAGTTGATTTGAGTCAT
TCATACAAAAGAGCAACCATGGATCTCCTATCTGAAGGTCTAAATAAAGGAATTGCAGTC
ACAGGGAAAGTTTTGTTCTTTGCTAAGAAAGAGAGTGTAGCTCCATTGTGCTATGTGCTA
TCTGATTCCAATCACACATGTTCCGTAATTACAGTGTATGGTATTCGCAGTGATGCTATT
AAAGAAGGAGATCAAGTCACTTTATTGGAGCCTTTCTACCGTTTTGTTGATTTTTCTTGG
AAAGGAAAGCACTACCAGTTCAAATCAGTGCGAGTGGATTTTGTGGAACAACTTCTTGTA
AATGGAAAAAACTTGTCTTCTCATCACGCAGTTCGTACGTCAATCTATGCACAACACAAG
GCATGA

Peptide Sequence

PEP ID

Solyc05g008420.3.1
PEP Infomation

Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A0B2PGQ7_GLYSO)
Sequence

MSIPTGEVAGEDLFAQATAAADDLYNFRDNCFRLTSEERDSKLQSQSDLALQILDKIPIE
KRKLPLQRATSEYLRGKILDAVPVYKKEAEDHLSKAVKLNPSLVDAWLCLGNCIWKKGDL
NAAKNCFMFALGKGPNKKILCQLSMLERKLSHDAENPEEIVDESIKHAREAIALDVKDGY
SWYNLGNAFLISFFVTGSWDHSKLLQSLKAYQNAERDEKMKSNPDLYYSCATVNKYLENY
ERALTGFEAAALMDPGLSAMEDAQMIVLLLDKLDYLLRGQTKAKRLSSLSSSLATVDLSH
SYKRATMDLLSEGLNKGIAVTGKVLFFAKKESVAPLCYVLSDSNHTCSVITVYGIRSDAI
KEGDQVTLLEPFYRFVDFSWKGKHYQFKSVRVDFVEQLLVNGKNLSSHHAVRTSIYAQHK
A*

Transcript Sequence

Transcript ID

Solyc05g008420.3.1
Transcript Infomation

Tetratricopeptide repeat protein 5 (AHRD V3.3 *** A0A0B2PGQ7_GLYSO)
Sequence

AACTAAAGATCAAAACTATATATATTTAGAGTTAAATAAATTCCATTTTGTAATTTTGTA
TTACAGCCTTCCTTCGTTAACCTCGAGCAGAATCTCCGGAGATGAGCATTCCAACCGGAG
AAGTCGCCGGAGAGGACTTGTTTGCACAGGCAACTGCAGCCGCCGATGACCTTTATAATT
TTCGCGACAACTGTTTCCGCTTAACTTCGGAGGAGAGAGACTCCAAATTGCAAAGCCAAT
CTGATCTAGCTCTTCAAATCCTCGATAAAATTCCTATAGAAAAGAGGAAATTGCCACTTC
AACGTGCAACCTCTGAGTATCTAAGAGGGAAAATACTGGATGCAGTTCCTGTGTATAAGA
AGGAAGCTGAGGATCATCTGTCTAAAGCTGTTAAGTTGAATCCATCTCTTGTGGATGCTT
GGCTGTGTCTGGGTAACTGCATTTGGAAGAAAGGAGATTTAAATGCAGCTAAAAACTGCT
TTATGTTTGCTCTTGGCAAGGGTCCAAATAAGAAGATTCTATGTCAACTATCAATGCTTG
AAAGGAAACTGTCTCATGATGCTGAAAATCCAGAAGAAATTGTTGATGAAAGCATCAAAC
ATGCCAGGGAAGCAATCGCTTTGGATGTCAAGGATGGATATTCTTGGTATAACCTAGGAA
ATGCATTTCTCATTTCTTTTTTTGTGACTGGATCATGGGACCACAGCAAGCTTCTACAGT
CATTAAAAGCATACCAGAATGCTGAGAGAGATGAAAAAATGAAGTCAAATCCTGATCTGT
ACTACAGTTGTGCCACTGTGAACAAATATCTGGAGAATTATGAGAGAGCCCTTACTGGAT
TTGAAGCTGCTGCATTAATGGATCCTGGTCTTAGTGCTATGGAGGATGCACAAATGATAG
TTCTGCTTCTTGATAAATTAGACTATTTGCTTCGGGGTCAGACTAAGGCTAAGCGGCTTT
CTTCCCTATCATCATCGCTTGCTACAGTTGATTTGAGTCATTCATACAAAAGAGCAACCA
TGGATCTCCTATCTGAAGGTCTAAATAAAGGAATTGCAGTCACAGGGAAAGTTTTGTTCT
TTGCTAAGAAAGAGAGTGTAGCTCCATTGTGCTATGTGCTATCTGATTCCAATCACACAT
GTTCCGTAATTACAGTGTATGGTATTCGCAGTGATGCTATTAAAGAAGGAGATCAAGTCA
CTTTATTGGAGCCTTTCTACCGTTTTGTTGATTTTTCTTGGAAAGGAAAGCACTACCAGT
TCAAATCAGTGCGAGTGGATTTTGTGGAACAACTTCTTGTAAATGGAAAAAACTTGTCTT
CTCATCACGCAGTTCGTACGTCAATCTATGCACAACACAAGGCATGA