Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g008270.3.1
CDS Infomation

DUF3326 family protein (AHRD V3.3 *** A0A072VFG1_MEDTR)
Sequence

ATGGCTACATTAGGCCTCAGTCTTTTCTCAGCTTCAATGGGTCATCAATGTATTCTCCCA
AAATCCCAATATTCACCTTCTAAGTTCAGAATTTCATGTTCCAGCTTGTTCTTGCAAAAT
AACAAGTTTAAGAGGAAGTATACAAGTGTGATGATAGTGCCTACTGGTGTTGGAGCAGCT
ATTGGTGGCTATGCTGGTGATGCTTTGCCTGTTGCTCGAGCACTTTCCTCTGTTGTTGAC
TGCCTTATTTCTCATCCTAATGTTCTTAATGCAGCAATGCTGTACTGGCCCATGCCAAAT
GCACTCTATGTTGAAGGCTATGCACTTGATCGATTTGCTGAAGGTCTCTGGACACTGCAA
CCAGTTCATCAAAATAGGGTAGGACTAGTTTTTGATGCTGGGATAGAGGAAGAGCTTCTT
ATGCGCCACCTACAAGTGGTTGATGCAACAAGAGCTTCTCTTGGATTGCCAATAGTGGGA
TACACTGTAACTGACACCCCTTTACTGGTGGAGAAATGGGTTGATCCAACAAGTGGCCAA
TCAACAGGGAGGATTCAGCGTCCAGATTCACTACTGAGAGCTGTGGAGAACTTGCGAAAT
GAGTGTAAGGTAGATGCAGTTGCGGTTGTGGCACGCTTTCCAGACGATGATACCAAAGAC
TTGGATGATTATCGACAAGGAGTGGGAATAGATCTTTTGGCAGGTGTGGAAGCTGTTATA
AGTCACTTAGTGGTGAAGAATTTTCAGATTCCTTGCGCACATGCTCCTGCAGTATTGCCT
CCTCAATTAAACATGGCAGTGTGCCCAAAATCAGCTGCTGAAGAGATAGGATTTACATTC
TTGCCGTGTGTCCTTGCTGGGCTTAGCACTGCACCACAGTATTTGGTCAAGGCCAATAAT
TATTCAGACAACTGCATTGTAGCTGGTGACGTTGACAGTGTGATTCTACCAATTGATGCT
TGTTGTGGAGATGGTGCTCTTGCATTTGCCAATCGTAAAAGAAACAAGCCTCTTATAATT
GCTGTTGAAGAGAATCAAACAGTTCTGAATGATACACCGGACTCACTTGGTATTGAAGCT
GTGAAGGTGTCAAACTACTGGGAAGCAATAGGTGTAATTGCAGCTCACAAGGCAGGAATA
GATCCAAATTCTCTTAGAAGGAATAGAATCAACAACATAACACCAACTACTTTTGTTCCT
TCAAATGGTTATGCTAAATCAAGTATCAAATCATTTGTTTGA

Peptide Sequence

PEP ID

Solyc05g008270.3.1
PEP Infomation

DUF3326 family protein (AHRD V3.3 *** A0A072VFG1_MEDTR)
Sequence

MATLGLSLFSASMGHQCILPKSQYSPSKFRISCSSLFLQNNKFKRKYTSVMIVPTGVGAA
IGGYAGDALPVARALSSVVDCLISHPNVLNAAMLYWPMPNALYVEGYALDRFAEGLWTLQ
PVHQNRVGLVFDAGIEEELLMRHLQVVDATRASLGLPIVGYTVTDTPLLVEKWVDPTSGQ
STGRIQRPDSLLRAVENLRNECKVDAVAVVARFPDDDTKDLDDYRQGVGIDLLAGVEAVI
SHLVVKNFQIPCAHAPAVLPPQLNMAVCPKSAAEEIGFTFLPCVLAGLSTAPQYLVKANN
YSDNCIVAGDVDSVILPIDACCGDGALAFANRKRNKPLIIAVEENQTVLNDTPDSLGIEA
VKVSNYWEAIGVIAAHKAGIDPNSLRRNRINNITPTTFVPSNGYAKSSIKSFV*

Transcript Sequence

Transcript ID

Solyc05g008270.3.1
Transcript Infomation

DUF3326 family protein (AHRD V3.3 *** A0A072VFG1_MEDTR)
Sequence

GAAATTAACTATTTGACAAACCTCATATCACCATTATCCTCTTTCTTGACAAAATTTCAA
TTCTTTACTTCAACAAAAATGGCAACAGAGAAATTATTCTAGTAAAATTAGCTGCAACAA
TGGCTACATTAGGCCTCAGTCTTTTCTCAGCTTCAATGGGTCATCAATGTATTCTCCCAA
AATCCCAATATTCACCTTCTAAGTTCAGAATTTCATGTTCCAGCTTGTTCTTGCAAAATA
ACAAGTTTAAGAGGAAGTATACAAGTGTGATGATAGTGCCTACTGGTGTTGGAGCAGCTA
TTGGTGGCTATGCTGGTGATGCTTTGCCTGTTGCTCGAGCACTTTCCTCTGTTGTTGACT
GCCTTATTTCTCATCCTAATGTTCTTAATGCAGCAATGCTGTACTGGCCCATGCCAAATG
CACTCTATGTTGAAGGCTATGCACTTGATCGATTTGCTGAAGGTCTCTGGACACTGCAAC
CAGTTCATCAAAATAGGGTAGGACTAGTTTTTGATGCTGGGATAGAGGAAGAGCTTCTTA
TGCGCCACCTACAAGTGGTTGATGCAACAAGAGCTTCTCTTGGATTGCCAATAGTGGGAT
ACACTGTAACTGACACCCCTTTACTGGTGGAGAAATGGGTTGATCCAACAAGTGGCCAAT
CAACAGGGAGGATTCAGCGTCCAGATTCACTACTGAGAGCTGTGGAGAACTTGCGAAATG
AGTGTAAGGTAGATGCAGTTGCGGTTGTGGCACGCTTTCCAGACGATGATACCAAAGACT
TGGATGATTATCGACAAGGAGTGGGAATAGATCTTTTGGCAGGTGTGGAAGCTGTTATAA
GTCACTTAGTGGTGAAGAATTTTCAGATTCCTTGCGCACATGCTCCTGCAGTATTGCCTC
CTCAATTAAACATGGCAGTGTGCCCAAAATCAGCTGCTGAAGAGATAGGATTTACATTCT
TGCCGTGTGTCCTTGCTGGGCTTAGCACTGCACCACAGTATTTGGTCAAGGCCAATAATT
ATTCAGACAACTGCATTGTAGCTGGTGACGTTGACAGTGTGATTCTACCAATTGATGCTT
GTTGTGGAGATGGTGCTCTTGCATTTGCCAATCGTAAAAGAAACAAGCCTCTTATAATTG
CTGTTGAAGAGAATCAAACAGTTCTGAATGATACACCGGACTCACTTGGTATTGAAGCTG
TGAAGGTGTCAAACTACTGGGAAGCAATAGGTGTAATTGCAGCTCACAAGGCAGGAATAG
ATCCAAATTCTCTTAGAAGGAATAGAATCAACAACATAACACCAACTACTTTTGTTCCTT
CAAATGGTTATGCTAAATCAAGTATCAAATCATTTGTTTGAAATATAGAAAACTATAGTA
TATACATTCATCATATTGTAAGGACTAATTTGATTTGTATAGTGCAATAGTAAAGGCTAA
ACGGAAACATGGTCCGTGAGGATTCATATATTCGACCCCAACAACTAACTAGTTGGGGAC
TGAGGTGTAGTTGTAATATAACGGAAAGAGGTTTATATTCTTCGTTTATTTTCTCTCTT