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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g007870.2.1
CDS Infomation

R2R3MYB transcription factor 117
Sequence

ATGTCATCAACATCATCATCTTGTTCTTGTTCTCCTATGGGTACTTCAATGGGGATGTTT
TTTGCTGATATGAATTCACTCTCTATTAACACTCCAGAAAGTCTTGATGAAGGTAAAGGG
AGAAGGGGTTCTTGGGATTTTCAATTCTTGAATAAAGGGGGGTCCTTTTTTTCTTCTCGT
AGTCTTGATGAAGCCCAAAATAGTGAAGAAAATAATGAGTCTATTGATCTTAATGCTTCT
TGTTTCAATGATGAGAAACAAATTACAATGCATACTACTTTTAACAGTAACAATAATAGT
AGTAGTAGTGGCTGTAATGGCAAGGAAACAGAGAATGGACAGTCAAAACTTTGTGCTAGA
GGTCATTGGAGACCAGCTGAAGATGCTAAGCTTAAAGAACTTGTTGCTATTTATGGCCCT
CAGAATTGGAACCTTATTGCTGAAAAGTTAGAAGGAAGGTCAGGAAAAAGTTGTAGATTG
AGATGGTTTAACCAGTTGGATCCAAGAATCAACAGAAGGGCATTTAGTGAAGAGGAAGAG
GAAAGATTAATGGCTGCTCATAGATTGTATGGTAACAAATGGGCAATGATAGCAAGACTA
TTTCCAGGGAGAACAGACAATGCAGTGAAGAACCATTGGCATGTAATAATGGCCAGAAAA
TATAGAGAACAATCAAGTGCTTATAGGAGAAGAAAAATGGGACAATTTGTTTACAGAAGA
TCAACAACAACAGTAGTTGAAGAAGCAGATAATTCAAGTGGCCAAAATTCTGTTAACCAC
TTTAGTATGAAAATGAATAATAATAATGGTCCAAATGGTTGGGTTGTTTATGGACCAAAT
GGCTCACCCCACATGGCTGCTTCTGCTGGAGAAGCAGCAACTCCTAGTAGCACCAATAAT
GTGCCTCTCTATTCTCCATACTCACCATTTGCTGCTCCCCCTTTTGACTCATTACCTGCA
GGTCATTGTGGGAATGAGATGATAAATGTTCTAAACCAACAAGGAGGCAGATCTTGGGAT
AGGCAAAGGGAAGTTACTCATCAACATCCATCTAATTCATTAATGATGATGAATAATATG
CAACAAGATCAATCACAATATGTCTTGCAGTTTCCTTATGTTACACAAATTTCATCATCA
CCATCAACAACAGAACAAGGACTAGTAAAAGAGGACAAAAGAAGCAACAACAACAGTGAT
AATACCACAATTGCACCACCATTTATAGACTTTCTTGGAGTAGGAGCCACTTGA

Peptide Sequence

PEP ID

Solyc05g007870.2.1
PEP Infomation

R2R3MYB transcription factor 117
Sequence

MSSTSSSCSCSPMGTSMGMFFADMNSLSINTPESLDEGKGRRGSWDFQFLNKGGSFFSSR
SLDEAQNSEENNESIDLNASCFNDEKQITMHTTFNSNNNSSSSGCNGKETENGQSKLCAR
GHWRPAEDAKLKELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEE
ERLMAAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKMGQFVYRR
STTTVVEEADNSSGQNSVNHFSMKMNNNNGPNGWVVYGPNGSPHMAASAGEAATPSSTNN
VPLYSPYSPFAAPPFDSLPAGHCGNEMINVLNQQGGRSWDRQREVTHQHPSNSLMMMNNM
QQDQSQYVLQFPYVTQISSSPSTTEQGLVKEDKRSNNNSDNTTIAPPFIDFLGVGAT*

Transcript Sequence

Transcript ID

Solyc05g007870.2.1
Transcript Infomation

R2R3MYB transcription factor 117
Sequence

GGGTTGTTTTCTTGATACACAAAAAGTAGTAAAAATTGTTCCTTTATCTCATTTTCTTGA
ATTTTTGTCCAAGAATGTTGTAAAGATTATATCTTTATGCACCAAAAGTCTCATGTCATC
ATCATCATCATCTTCTTGTTCTTGTTGAGTTGTTTTTCTTCTATAGTTGCTAGCTACTTC
AATGGGGTTGTTTTCTTGATATAGAAAAGAGTGGTCAAGTTTCTTCCTTCACCTCATTTT
CTTGAATTTTTGTTCAAGAATGTTGTAAAGATCAAATCTTTATGCACAAAAAGTCTCATG
TCATCAACATCATCATCTTGTTCTTGTTCTCCTATGGGTACTTCAATGGGGATGTTTTTT
GCTGATATGAATTCACTCTCTATTAACACTCCAGAAAGTCTTGATGAAGGTAAAGGGAGA
AGGGGTTCTTGGGATTTTCAATTCTTGAATAAAGGGGGGTCCTTTTTTTCTTCTCGTAGT
CTTGATGAAGCCCAAAATAGTGAAGAAAATAATGAGTCTATTGATCTTAATGCTTCTTGT
TTCAATGATGAGAAACAAATTACAATGCATACTACTTTTAACAGTAACAATAATAGTAGT
AGTAGTGGCTGTAATGGCAAGGAAACAGAGAATGGACAGTCAAAACTTTGTGCTAGAGGT
CATTGGAGACCAGCTGAAGATGCTAAGCTTAAAGAACTTGTTGCTATTTATGGCCCTCAG
AATTGGAACCTTATTGCTGAAAAGTTAGAAGGAAGGTCAGGAAAAAGTTGTAGATTGAGA
TGGTTTAACCAGTTGGATCCAAGAATCAACAGAAGGGCATTTAGTGAAGAGGAAGAGGAA
AGATTAATGGCTGCTCATAGATTGTATGGTAACAAATGGGCAATGATAGCAAGACTATTT
CCAGGGAGAACAGACAATGCAGTGAAGAACCATTGGCATGTAATAATGGCCAGAAAATAT
AGAGAACAATCAAGTGCTTATAGGAGAAGAAAAATGGGACAATTTGTTTACAGAAGATCA
ACAACAACAGTAGTTGAAGAAGCAGATAATTCAAGTGGCCAAAATTCTGTTAACCACTTT
AGTATGAAAATGAATAATAATAATGGTCCAAATGGTTGGGTTGTTTATGGACCAAATGGC
TCACCCCACATGGCTGCTTCTGCTGGAGAAGCAGCAACTCCTAGTAGCACCAATAATGTG
CCTCTCTATTCTCCATACTCACCATTTGCTGCTCCCCCTTTTGACTCATTACCTGCAGGT
CATTGTGGGAATGAGATGATAAATGTTCTAAACCAACAAGGAGGCAGATCTTGGGATAGG
CAAAGGGAAGTTACTCATCAACATCCATCTAATTCATTAATGATGATGAATAATATGCAA
CAAGATCAATCACAATATGTCTTGCAGTTTCCTTATGTTACACAAATTTCATCATCACCA
TCAACAACAGAACAAGGACTAGTAAAAGAGGACAAAAGAAGCAACAACAACAGTGATAAT
ACCACAATTGCACCACCATTTATAGACTTTCTTGGAGTAGGAGCCACTTGAATAATTCAA
ATCTTCTTCTTTTTTTATTTTTCAAGAAAAAGGCCCCCCTCCCCTCCCCTTTTGAAACAA
TATTAGTAGAGCATGTAACAAGTATTTTAGTTTTTCTCATTCTGTTATTATGTGTCAATT
TGTGACACTGAAATATCAAAAAGCATTAAAAAAAAAAACTCCACTTTGCAAACTGTTAAC
AATAAGGTGTTGTCACTTCTTTGCCTTTTTTTACTCATTTGTTTTAGTAGTGAGATCAAA
TAGTGTGACCACAATAAAATTCATAATTTTTTGGTCATTGAAATTCAATTTTAAGGTGGG
GGGTGGGGGTGGGGTGTACAAAGCAAGAAAAGTGGGGAAATTGGAGACATCCTTTTCTCA
TGAGGCTGCCAAAAAAACAGGCAGAAATTCAGGGGTCCTGAACAACAAAAACTTTATGTA
AGTTGCTATTTTATGCAATCAATTATGGTAACTGCTAAACATACATTTGCCTCAGCAGAA
TCTTTATGTCACCAACATGAGAGTGCTTATTTGGAGCTGTTCCAACAGTTCAATACAAGA
CAATTCCTCACCCAACCCCCCTCATCATACACAAAATATATACTATGTATGTGAATTCGG
ATTTAGTCAGAAAAAAAAATCATATATACCATAAGTAGCGAAGTTAAGCGTTTCGTTAAA
GGTATATTAGGTAAGATATATACATAGTCTTTAAGAATAGACACAAAATTATAAAAATAA
TTAAGTACACCTATAATTTTCTTTTGAAGTTTATTGCCTTAAAATATGTCAAATTTTCAG
TAATTATGATATCTTCTAAGTAAGGTGGAATGCATAGTAAAATATCTAAGGTGAAAAGTA
AAAATTAAAGTATTTTTTAAAAAAGCTACTTTTATCTGTTTATTTGATGTGACAATTTCT
TAGTCCGTCCTAATAAAAGAGAACGGAGTGAAAGACAT