Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g007760.1.1
CDS Infomation

LOW QUALITY:SET domain-containing family protein (AHRD V3.3 *** B9HI95_POPTR)
Sequence

ATGGAGGAAGAAGAAGACAGAATACAAAATCTCAGATCCAAAGCCACAGAGCTTTTACTA
AGAAAAGAATGGAAGGACTCCATTGAAGTTTACACTGAGTTAATCTCTCTTTGTCATGAC
CAAATCTCAAAACCCCATCAAAATCTTGATCCAAATAACCTCCCAAAACTCAAAAAATCC
CTCTGTTTAGCTCTATGTAACCGCGCTGAAGCTCGACTAAATCTTCAAGATTATCCTCAA
GCTTTACTGGACTGTAATGAAGCTTCCCAAATTGGAAACACCCATTTCAAGACTCTGCTT
TGTAAAGGTAAGATTTTGCTAAGTCTCAATCAATATGGTTTGGCTTTAGATTGTTTTAAG
AAAGCAAGTCTTGATCCCAATGAGTTAGAAAATTCTGAAATGCTTAATGGGTATTTAGAG
AAGTGTAGAAAGTTTGAATTTTTATCAAGAACTGGTGCTTTTGATATCTCTGATTGGGTA
CTTAATAAGTTTCAAGGCAAACCCCCTGAGCTAGCTGAGTACATTGGTTCAATAGAGATT
AAGAAATCAGATATCAGTGGGCGTGGATTGTTCGCGACAAAGAATCTTGATTGTGGGAGC
TTGTTGTTAGTTACTAAAGCTGTTGCTGTTGAAAGAGCTATAGTACCTGAATCTGTTTTT
CAAGATTCTAAGGAACAAGCTCAGTTAGATATGTGGAGGAATTTCATTGACAGAATCTTG
GAATCTATTAAGAAATGTAATCGAACACGAGATTTGATTAGTAAGCTTTCAAATGGTGAG
AATGAGGATGATTTAGAGGTTCCTGACATTGATCTATTTAGGCCTGAGGGTGAAGATAGT
AGTACATTACATGATAAGAAGATTGATAAGGAAAAATTGCTCAACATTCTTGATGTGAAC
TCTCTTGTTGAGGAGTTGATTTCCGCGAAAGTTCTTGGCAAAAACAGTGATGTCCATGGG
ATTGGACTTTGGATTTTGTCTTCATTTATCAACCATTCATGTGATCCCAACGTGAGGCGT
TCCCACGTTGGTGATCACCTGATGATTCATGCTTCTAGAGACATAAAAGCAGGCGAAGAG
CTCACATTCGCCTATTTTGATGTGTTTTCCCCCTTTAGAGACCGTGAAGAGAAGGCGAAA
AACTGGGGCTTTGTTTGTACATGCAAAAGGTGCAATCTTGAAAAGGGTGTTTGTTCAAAT
CAAGAAATGATGGAAATCGAGATGTTTCTTGGTAAAGGACTAGACAATGGAGGTGTAGTT
TATAGATTGGAGGAAAACATGAGGAGATGGATGGTAAGGGGGAAAGGGAAAGGGTATTTG
AGATCGTCGTTTTGGCGAGTGTACTCAGAAGTTTACGAGTCTGAAAGATTGTTGAGGAAA
TGGGGAAGTAAAGTTCCATTGATGGATAATGTGTTGGATAGTGTTGTGGATGCAGTAGGA
AGTGATGAGAGAATTGTGAAGTTGTTAATGAGAAAAAATGGACACAAAGGGAATGGGATT
GTAGAGATGGAAAAAGCAATGAAATTGGGAAGGGGATTGTATGGTAAGATAATGAAGAAA
CAAACATTGAGGACTATACTAATTCAGCTTGGTAACTAA

Peptide Sequence

PEP ID

Solyc05g007760.1.1
PEP Infomation

LOW QUALITY:SET domain-containing family protein (AHRD V3.3 *** B9HI95_POPTR)
Sequence

MEEEEDRIQNLRSKATELLLRKEWKDSIEVYTELISLCHDQISKPHQNLDPNNLPKLKKS
LCLALCNRAEARLNLQDYPQALLDCNEASQIGNTHFKTLLCKGKILLSLNQYGLALDCFK
KASLDPNELENSEMLNGYLEKCRKFEFLSRTGAFDISDWVLNKFQGKPPELAEYIGSIEI
KKSDISGRGLFATKNLDCGSLLLVTKAVAVERAIVPESVFQDSKEQAQLDMWRNFIDRIL
ESIKKCNRTRDLISKLSNGENEDDLEVPDIDLFRPEGEDSSTLHDKKIDKEKLLNILDVN
SLVEELISAKVLGKNSDVHGIGLWILSSFINHSCDPNVRRSHVGDHLMIHASRDIKAGEE
LTFAYFDVFSPFRDREEKAKNWGFVCTCKRCNLEKGVCSNQEMMEIEMFLGKGLDNGGVV
YRLEENMRRWMVRGKGKGYLRSSFWRVYSEVYESERLLRKWGSKVPLMDNVLDSVVDAVG
SDERIVKLLMRKNGHKGNGIVEMEKAMKLGRGLYGKIMKKQTLRTILIQLGN*

Transcript Sequence

Transcript ID

Solyc05g007760.1.1
Transcript Infomation

LOW QUALITY:SET domain-containing family protein (AHRD V3.3 *** B9HI95_POPTR)
Sequence

ATGGAGGAAGAAGAAGACAGAATACAAAATCTCAGATCCAAAGCCACAGAGCTTTTACTA
AGAAAAGAATGGAAGGACTCCATTGAAGTTTACACTGAGTTAATCTCTCTTTGTCATGAC
CAAATCTCAAAACCCCATCAAAATCTTGATCCAAATAACCTCCCAAAACTCAAAAAATCC
CTCTGTTTAGCTCTATGTAACCGCGCTGAAGCTCGACTAAATCTTCAAGATTATCCTCAA
GCTTTACTGGACTGTAATGAAGCTTCCCAAATTGGAAACACCCATTTCAAGACTCTGCTT
TGTAAAGGTAAGATTTTGCTAAGTCTCAATCAATATGGTTTGGCTTTAGATTGTTTTAAG
AAAGCAAGTCTTGATCCCAATGAGTTAGAAAATTCTGAAATGCTTAATGGGTATTTAGAG
AAGTGTAGAAAGTTTGAATTTTTATCAAGAACTGGTGCTTTTGATATCTCTGATTGGGTA
CTTAATAAGTTTCAAGGCAAACCCCCTGAGCTAGCTGAGTACATTGGTTCAATAGAGATT
AAGAAATCAGATATCAGTGGGCGTGGATTGTTCGCGACAAAGAATCTTGATTGTGGGAGC
TTGTTGTTAGTTACTAAAGCTGTTGCTGTTGAAAGAGCTATAGTACCTGAATCTGTTTTT
CAAGATTCTAAGGAACAAGCTCAGTTAGATATGTGGAGGAATTTCATTGACAGAATCTTG
GAATCTATTAAGAAATGTAATCGAACACGAGATTTGATTAGTAAGCTTTCAAATGGTGAG
AATGAGGATGATTTAGAGGTTCCTGACATTGATCTATTTAGGCCTGAGGGTGAAGATAGT
AGTACATTACATGATAAGAAGATTGATAAGGAAAAATTGCTCAACATTCTTGATGTGAAC
TCTCTTGTTGAGGAGTTGATTTCCGCGAAAGTTCTTGGCAAAAACAGTGATGTCCATGGG
ATTGGACTTTGGATTTTGTCTTCATTTATCAACCATTCATGTGATCCCAACGTGAGGCGT
TCCCACGTTGGTGATCACCTGATGATTCATGCTTCTAGAGACATAAAAGCAGGCGAAGAG
CTCACATTCGCCTATTTTGATGTGTTTTCCCCCTTTAGAGACCGTGAAGAGAAGGCGAAA
AACTGGGGCTTTGTTTGTACATGCAAAAGGTGCAATCTTGAAAAGGGTGTTTGTTCAAAT
CAAGAAATGATGGAAATCGAGATGTTTCTTGGTAAAGGACTAGACAATGGAGGTGTAGTT
TATAGATTGGAGGAAAACATGAGGAGATGGATGGTAAGGGGGAAAGGGAAAGGGTATTTG
AGATCGTCGTTTTGGCGAGTGTACTCAGAAGTTTACGAGTCTGAAAGATTGTTGAGGAAA
TGGGGAAGTAAAGTTCCATTGATGGATAATGTGTTGGATAGTGTTGTGGATGCAGTAGGA
AGTGATGAGAGAATTGTGAAGTTGTTAATGAGAAAAAATGGACACAAAGGGAATGGGATT
GTAGAGATGGAAAAAGCAATGAAATTGGGAAGGGGATTGTATGGTAAGATAATGAAGAAA
CAAACATTGAGGACTATACTAATTCAGCTTGGTAACTAA