Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g007740.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XFB3_CYNCS)
Sequence	ATGTTGTATTTTCCAAAAGTAAAGGGATCATATCATACATTCTTGTTTCTACAAACCTTC TTCGTCGTCGCCTTCACATCTAAAGCCTCGACTGTTAGAGGGTTTAAGCAGTCGGAAACA CCATTGCTCCGCCGCAGCGCCGCCTTTTTCTGTTGCGTAAGCTCATCAAATAATCCCAAA TCATTGAGAACTCTATCAAAGGTAAGCAGACAATCTCTTCATTTAGAATCGTTAAAGTTC GTTAATTTTTTAAGAAATACCAGTACTGCTACTCAAATATCTGAGATTGATAATTATAGT GAGTCAAAGGGGGGAAATAACAGTGATTTTCAGCAAAACCCAGATGGGGATTTGAATTAT AACTCGAACAATACGGGTTCTTTGAATAAATTAAACTGGAAGGATCAGGAATGGGCGTAT AATCAGCAGTTATCTCGTAGCACGCAAGGCGGCGGGAGTTATAGTGGAAATTCTAGGAGA ATAGAGCAGAACCCTAGTGAGGTTTATGAGCAAAAAACTAGAACTGAATTTCAAGAATTA AAGGATACCAAAGGGTTTCAGCAGAACCCACATGCGAAAAATGAGAACTTTTCATCTGGG TATGTTAATGTTTCATCTAGAAATGAATTTCAGCAAACAGTTGGGAGAAACAATGATTTC GGGTCTCGAAAGGATTATCAAAGTGATTTAGTTCATAATAGAAATGATCGTAGTTCCAGG TTTGAGGGAGGTTTAGAAGCTCAGTCGAGTCAAAATGGAGTATATGGACACTATCAACAG AATTTAAATGGGGGAAACAGTGTAACGTCACAGCAGAATTTCAATGGCAATTACATGAGA AACGTTGGAATGCCTCAGCAAAACATTTCCAATTATGACCCTGGAAATGTAAGGAATGTT CAATCTGAGTATCCACAAAATGCAAGTGGTTATAACATGGAAAGGCATACGAATTCAAGT GGCTACTCAAGGGAGATGATGGGGCGATATCAGCAAAACTTAAGCAGCTTTAACCCCTCT AGTGCTGGACATCAAGCTTCTTATCAATATCAGAATGGAATAGTTGGCCATCAAGAAATG AGAAGTGCAACACCTGTCGAACAGTTGATTGATTCTGATGATAGCAGCAGTAAAAAAGGT TCAGTTGATGAGCTTGATGACTTATGTAAAGAAGGCAAAGTAAAGGAGGCAGTAGAAGTT TTGCAGTTGTTGGAGCAGCAACATGTCACAGTCGATTTGTCTAGATATATTATGTTGATG GATGTGTGTAGTGAGGATAAATCCCTTGAGGATGCTAAATCAATTCATGAGCACCTTGTG AGATCTCATCCTCATCTTGACATCAAAATGTACAATAAGATTCTTGAAATGTATGGAAAA TGTGGCTCCATGAAAGATGCCTTTCTAGTGTTCCGAAAAATGCCTCAACGTAATCTGACT TCTTGGGACACAATGATTACATGGCTTGGTAAGAATGGTCTTGGAGAAGATGCAATAGAA TTGTTTGGGGAATTCAAGGAAACTGGGATGAAACCTGATGGCCAAATGTTTCTGGGAGTC TTCCATGCTTGTAGTGTTGTTGGTGATATAGTTGAGGGCATGTTGCACTTTGAATCAATG AGTAAGGATTATGACATTGATCTATCCATGGAACAATATGTTGGAGCGGTGGATATGTTG GGAAGTACGGGATATCTTGATGAAGCAATGGATTTCATTGAAAGGATGCCTATAGAGCCA AGTATTGATGTATGGGAAACCATGATGAATCTCTGTAGAATTCATGGGAACTTGGAGCTT GGGGATCGTTGTGCGGAGATTGTTGAGCTCCTGGACCCATGTCGTTTGGATGAACAGTCA AAGGCAGGTTTTTTGGCTGTAAAAGCATCAGACATCGCTACGGAGAAAGAGAAGAAGAAA TCTGCTCAAAGTCTTCTTGAGGCTAGAAGCAAAGTTCATGAATATCGTGCGGGAGATAGG TCACATCCCGATCATGAGAAGATATATGCATTGCTTAGGGGTTTAAAGCAGCTAATGAAG GAGGACGGTTATATACCAGAGACGAAGTTTGTGTTACATGATGTAGACCAAGAAACTAAA GAGGACGCTTTAATGGCTCACAGCGAGAGATTGGCTTTTGCTCAAGGTCTTATGAATAGC TCTGCACGATCACCAATCCGGATTATAAAGAATCTGCGTGTCTGTGGTGATTGCCATAAT GCATTAAAGATTGCTTCAAGGCTTGTCGGTCGGGAAATTATCATGCGAGATGCTAAAAGA TTTCATCATTTAAAAGATGGATTGTGCTCACTTAGTATATTACTTTTTTTATTGTCGTCT AGAAGATCTTTTTCTCTTTTTCCTTTTTTCTTTTTTATTTTCTTTCTTTACATAAGCATG AAATTACCAAAGTTTATAACCAGAGACACGAGATGTAATTTCACGACCAGGGAATGCGAC TCTAAGGAACGTGTTCAGTTTCCCACTCATTATTATGAAGATCAACTGAACGCTTTAACA CATCCAAGACTCAAGATTGTAGAGCATAGGTATAATTCATAG

Peptide Sequence

PEP ID	Solyc05g007740.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XFB3_CYNCS)
Sequence	MLYFPKVKGSYHTFLFLQTFFVVAFTSKASTVRGFKQSETPLLRRSAAFFCCVSSSNNPK SLRTLSKVSRQSLHLESLKFVNFLRNTSTATQISEIDNYSESKGGNNSDFQQNPDGDLNY NSNNTGSLNKLNWKDQEWAYNQQLSRSTQGGGSYSGNSRRIEQNPSEVYEQKTRTEFQEL KDTKGFQQNPHAKNENFSSGYVNVSSRNEFQQTVGRNNDFGSRKDYQSDLVHNRNDRSSR FEGGLEAQSSQNGVYGHYQQNLNGGNSVTSQQNFNGNYMRNVGMPQQNISNYDPGNVRNV QSEYPQNASGYNMERHTNSSGYSREMMGRYQQNLSSFNPSSAGHQASYQYQNGIVGHQEM RSATPVEQLIDSDDSSSKKGSVDELDDLCKEGKVKEAVEVLQLLEQQHVTVDLSRYIMLM DVCSEDKSLEDAKSIHEHLVRSHPHLDIKMYNKILEMYGKCGSMKDAFLVFRKMPQRNLT SWDTMITWLGKNGLGEDAIELFGEFKETGMKPDGQMFLGVFHACSVVGDIVEGMLHFESM SKDYDIDLSMEQYVGAVDMLGSTGYLDEAMDFIERMPIEPSIDVWETMMNLCRIHGNLEL GDRCAEIVELLDPCRLDEQSKAGFLAVKASDIATEKEKKKSAQSLLEARSKVHEYRAGDR SHPDHEKIYALLRGLKQLMKEDGYIPETKFVLHDVDQETKEDALMAHSERLAFAQGLMNS SARSPIRIIKNLRVCGDCHNALKIASRLVGREIIMRDAKRFHHLKDGLCSLSILLFLLSS RRSFSLFPFFFFIFFLYISMKLPKFITRDTRCNFTTRECDSKERVQFPTHYYEDQLNALT HPRLKIVEHRYNS*

Transcript Sequence

Transcript ID	Solyc05g007740.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XFB3_CYNCS)
Sequence	CTCATGTTGTATTTTCCAAAAGTAAAGGGATCATATCATACATTCTTGTTTCTACAAACC TTCTTCGTCGTCGCCTTCACATCTAAAGCCTCGACTGTTAGAGGGTTTAAGCAGTCGGAA ACACCATTGCTCCGCCGCAGCGCCGCCTTTTTCTGTTGCGTAAGCTCATCAAATAATCCC AAATCATTGAGAACTCTATCAAAGGTAAGCAGACAATCTCTTCATTTAGAATCGTTAAAG TTCGTTAATTTTTTAAGAAATACCAGTACTGCTACTCAAATATCTGAGATTGATAATTAT AGTGAGTCAAAGGGGGGAAATAACAGTGATTTTCAGCAAAACCCAGATGGGGATTTGAAT TATAACTCGAACAATACGGGTTCTTTGAATAAATTAAACTGGAAGGATCAGGAATGGGCG TATAATCAGCAGTTATCTCGTAGCACGCAAGGCGGCGGGAGTTATAGTGGAAATTCTAGG AGAATAGAGCAGAACCCTAGTGAGGTTTATGAGCAAAAAACTAGAACTGAATTTCAAGAA TTAAAGGATACCAAAGGGTTTCAGCAGAACCCACATGCGAAAAATGAGAACTTTTCATCT GGGTATGTTAATGTTTCATCTAGAAATGAATTTCAGCAAACAGTTGGGAGAAACAATGAT TTCGGGTCTCGAAAGGATTATCAAAGTGATTTAGTTCATAATAGAAATGATCGTAGTTCC AGGTTTGAGGGAGGTTTAGAAGCTCAGTCGAGTCAAAATGGAGTATATGGACACTATCAA CAGAATTTAAATGGGGGAAACAGTGTAACGTCACAGCAGAATTTCAATGGCAATTACATG AGAAACGTTGGAATGCCTCAGCAAAACATTTCCAATTATGACCCTGGAAATGTAAGGAAT GTTCAATCTGAGTATCCACAAAATGCAAGTGGTTATAACATGGAAAGGCATACGAATTCA AGTGGCTACTCAAGGGAGATGATGGGGCGATATCAGCAAAACTTAAGCAGCTTTAACCCC TCTAGTGCTGGACATCAAGCTTCTTATCAATATCAGAATGGAATAGTTGGCCATCAAGAA ATGAGAAGTGCAACACCTGTCGAACAGTTGATTGATTCTGATGATAGCAGCAGTAAAAAA GGTTCAGTTGATGAGCTTGATGACTTATGTAAAGAAGGCAAAGTAAAGGAGGCAGTAGAA GTTTTGCAGTTGTTGGAGCAGCAACATGTCACAGTCGATTTGTCTAGATATATTATGTTG ATGGATGTGTGTAGTGAGGATAAATCCCTTGAGGATGCTAAATCAATTCATGAGCACCTT GTGAGATCTCATCCTCATCTTGACATCAAAATGTACAATAAGATTCTTGAAATGTATGGA AAATGTGGCTCCATGAAAGATGCCTTTCTAGTGTTCCGAAAAATGCCTCAACGTAATCTG ACTTCTTGGGACACAATGATTACATGGCTTGGTAAGAATGGTCTTGGAGAAGATGCAATA GAATTGTTTGGGGAATTCAAGGAAACTGGGATGAAACCTGATGGCCAAATGTTTCTGGGA GTCTTCCATGCTTGTAGTGTTGTTGGTGATATAGTTGAGGGCATGTTGCACTTTGAATCA ATGAGTAAGGATTATGACATTGATCTATCCATGGAACAATATGTTGGAGCGGTGGATATG TTGGGAAGTACGGGATATCTTGATGAAGCAATGGATTTCATTGAAAGGATGCCTATAGAG CCAAGTATTGATGTATGGGAAACCATGATGAATCTCTGTAGAATTCATGGGAACTTGGAG CTTGGGGATCGTTGTGCGGAGATTGTTGAGCTCCTGGACCCATGTCGTTTGGATGAACAG TCAAAGGCAGGTTTTTTGGCTGTAAAAGCATCAGACATCGCTACGGAGAAAGAGAAGAAG AAATCTGCTCAAAGTCTTCTTGAGGCTAGAAGCAAAGTTCATGAATATCGTGCGGGAGAT AGGTCACATCCCGATCATGAGAAGATATATGCATTGCTTAGGGGTTTAAAGCAGCTAATG AAGGAGGACGGTTATATACCAGAGACGAAGTTTGTGTTACATGATGTAGACCAAGAAACT AAAGAGGACGCTTTAATGGCTCACAGCGAGAGATTGGCTTTTGCTCAAGGTCTTATGAAT AGCTCTGCACGATCACCAATCCGGATTATAAAGAATCTGCGTGTCTGTGGTGATTGCCAT AATGCATTAAAGATTGCTTCAAGGCTTGTCGGTCGGGAAATTATCATGCGAGATGCTAAA AGATTTCATCATTTAAAAGATGGATTGTGCTCACTTAGTATATTACTTTTTTTATTGTCG TCTAGAAGATCTTTTTCTCTTTTTCCTTTTTTCTTTTTTATTTTCTTTCTTTACATAAGC ATGAAATTACCAAAGTTTATAACCAGAGACACGAGATGTAATTTCACGACCAGGGAATGC GACTCTAAGGAACGTGTTCAGTTTCCCACTCATTATTATGAAGATCAACTGAACGCTTTA ACACATCCAAGACTCAAGATTGTAGAGCATAGGTATAATTCATAGCAGATGGGATGATTT CCACTTACTCTATCAGCTGTTTGTGTCGCGCTGTTCAAAGATCGGCAAGTACCTACCATA TTTAATGCCTCATGACCTCTTGATTTGGTTGGTGCTGTTAAAGTGTCAATATGCATAAGT TGTCCGGATTGGATACAAAGGTGAGTGCAATAGCAGATACTGAGTTATTGTTCTAAAGAT TGTAAAGGATGAGCAGCCAGGTTTTTTGACTCACCAAGAAACATATAAAGCTTCTATACT CTGTTCACCCCGGAACAAGAACAGATGAACCATCTTCTCAAACCGGATCAGCTAGACTAG TTGTTGTTGTCGAGGACGGTTGTCCATGAAGGGAGTTGTTTTCTATGTCTGAAGCTAACT GTTTCACATTCTGAAGTATAGAAATTAATAGGATAGGATCAAAATATTTTCATTTTGAGT ACTTCCATTCTTTTTTATGGAACAGTAATATTAGTAACATTCCTGTTGTATCCTTGTGCT TTGATGGTCTCCTTTTTCATGTTTGAACATGGCTTTTGTTTATGCAGTGCATTCAGAAAT TACAAACTTTTCCACCAAATGTCTTCCTTGAATTGTTACCTTCTTCGTTAACGTTTGATT ATAGAT