Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g007680.1.1
CDS Infomation

LOW QUALITY:Arabinanase/levansucrase/invertase (AHRD V3.3 *** AT1G26761.1)
Sequence

ATGGCAGCTCTCAAAGCCATAAACTCCATTACATCTCCAACAAGAATCACCAAGTTTACA
TTTTTACGAAACCCCACATGGTTTCAACCAAAACCCATCTTTCAACATCTCAAAACCAAA
AGAATTAGACTATTTCCAGCTAAATCCAGTTCAAAACCAAACACAAATCAAGAAAATGCA
GCTGATGAATCCTTGATAAATGACTCAATTTCAAGAATCCAACCACAGCCCACTTCAAAT
CAACCTCCATCTCCTTCAATTTCATCGTTTTCGCGTGGTTTAGTTTTTGATTTAGGGCAA
AAAGATTCTTGGGATAGCTCTGAAATTGGTTCACCTGTAGTGAAAAGGTACCTCAGTGAT
GATGAAGAGAGATGGTACATGTGGTACCATGGGAGGGATAGTAATGGTAAAGATTCAATT
GGTTTAGCTGTTTCTAGTAATGGGGTTCATTGGGAAAGAGGTGAAATTGTGTTGAATTGT
GGTGATAATTGGTGGGGTTTTGATACACAAAGTATTAGGCCATGTGAGGTAGTGATTATG
TCAAGTGCTAAAGTAAGAGCCAACAGCTCTGTTTATTGGCTTTACTATACTGGTTTTGGT
TCTGAAAAGATTGAAACTTTGAAAGATTTAGATATACCGCGATTTGGGAATGGAGATGGA
GAGATTTATAAGTCATTGCCTGGATTAGCAATGAGTCAAGATGGTAGACATTGGGCAAGA
ATTGAAGGGGAACATCATTCTGGTGCTTTGTTTGATGTTGGTTTAGATGGTGAATGGGAT
TCTTTGTTTATAGGTTCACCAAAAGTAGTTTACCATAGTAGTGGTGATTTAAGAATGTAT
TACCATTCATATGATCTTGAAAAAGGGTGTTTTGCAATAGGGATAGCTAGGTCAAGAGAT
GGAATGAAATGGTTAAAGCTAGGGAAGATTCTACAAGGTACAAGTGGTTTTGATGAACTA
GGAGTGTTGAAACCACATGTTATACGAAATCGAAAAGATGGGAAGTATATGATGGTTTAT
GAAGGTGTAGATGGAAATGGGAGGAGGAGTATAGGGATGGCAATGTCTTTAGATGGATTG
AAGGGATGGAGAAGAGTTGAAGAGTGTGATCCATTGTTGAAGAGATGTGAAGAAGGGGGT
TGGGATAGTGAAGGGGTGGGATCACCATATCTTGTTGAAATGGATGGAGATGATGAAGAT
CATGAATGGAGATTGTATTATAGAGGGATTGGAAAAGATGGAAGAAGTGGGATTGGTATG
GCAATGTCTCAAGGAAATGAATTCAAGAGTTTTCAAAGGTGGAAAGGGTTTCATTTGTAG

Peptide Sequence

PEP ID

Solyc05g007680.1.1
PEP Infomation

LOW QUALITY:Arabinanase/levansucrase/invertase (AHRD V3.3 *** AT1G26761.1)
Sequence

MAALKAINSITSPTRITKFTFLRNPTWFQPKPIFQHLKTKRIRLFPAKSSSKPNTNQENA
ADESLINDSISRIQPQPTSNQPPSPSISSFSRGLVFDLGQKDSWDSSEIGSPVVKRYLSD
DEERWYMWYHGRDSNGKDSIGLAVSSNGVHWERGEIVLNCGDNWWGFDTQSIRPCEVVIM
SSAKVRANSSVYWLYYTGFGSEKIETLKDLDIPRFGNGDGEIYKSLPGLAMSQDGRHWAR
IEGEHHSGALFDVGLDGEWDSLFIGSPKVVYHSSGDLRMYYHSYDLEKGCFAIGIARSRD
GMKWLKLGKILQGTSGFDELGVLKPHVIRNRKDGKYMMVYEGVDGNGRRSIGMAMSLDGL
KGWRRVEECDPLLKRCEEGGWDSEGVGSPYLVEMDGDDEDHEWRLYYRGIGKDGRSGIGM
AMSQGNEFKSFQRWKGFHL*

Transcript Sequence

Transcript ID

Solyc05g007680.1.1
Transcript Infomation

LOW QUALITY:Arabinanase/levansucrase/invertase (AHRD V3.3 *** AT1G26761.1)
Sequence

ATGGCAGCTCTCAAAGCCATAAACTCCATTACATCTCCAACAAGAATCACCAAGTTTACA
TTTTTACGAAACCCCACATGGTTTCAACCAAAACCCATCTTTCAACATCTCAAAACCAAA
AGAATTAGACTATTTCCAGCTAAATCCAGTTCAAAACCAAACACAAATCAAGAAAATGCA
GCTGATGAATCCTTGATAAATGACTCAATTTCAAGAATCCAACCACAGCCCACTTCAAAT
CAACCTCCATCTCCTTCAATTTCATCGTTTTCGCGTGGTTTAGTTTTTGATTTAGGGCAA
AAAGATTCTTGGGATAGCTCTGAAATTGGTTCACCTGTAGTGAAAAGGTACCTCAGTGAT
GATGAAGAGAGATGGTACATGTGGTACCATGGGAGGGATAGTAATGGTAAAGATTCAATT
GGTTTAGCTGTTTCTAGTAATGGGGTTCATTGGGAAAGAGGTGAAATTGTGTTGAATTGT
GGTGATAATTGGTGGGGTTTTGATACACAAAGTATTAGGCCATGTGAGGTAGTGATTATG
TCAAGTGCTAAAGTAAGAGCCAACAGCTCTGTTTATTGGCTTTACTATACTGGTTTTGGT
TCTGAAAAGATTGAAACTTTGAAAGATTTAGATATACCGCGATTTGGGAATGGAGATGGA
GAGATTTATAAGTCATTGCCTGGATTAGCAATGAGTCAAGATGGTAGACATTGGGCAAGA
ATTGAAGGGGAACATCATTCTGGTGCTTTGTTTGATGTTGGTTTAGATGGTGAATGGGAT
TCTTTGTTTATAGGTTCACCAAAAGTAGTTTACCATAGTAGTGGTGATTTAAGAATGTAT
TACCATTCATATGATCTTGAAAAAGGGTGTTTTGCAATAGGGATAGCTAGGTCAAGAGAT
GGAATGAAATGGTTAAAGCTAGGGAAGATTCTACAAGGTACAAGTGGTTTTGATGAACTA
GGAGTGTTGAAACCACATGTTATACGAAATCGAAAAGATGGGAAGTATATGATGGTTTAT
GAAGGTGTAGATGGAAATGGGAGGAGGAGTATAGGGATGGCAATGTCTTTAGATGGATTG
AAGGGATGGAGAAGAGTTGAAGAGTGTGATCCATTGTTGAAGAGATGTGAAGAAGGGGGT
TGGGATAGTGAAGGGGTGGGATCACCATATCTTGTTGAAATGGATGGAGATGATGAAGAT
CATGAATGGAGATTGTATTATAGAGGGATTGGAAAAGATGGAAGAAGTGGGATTGGTATG
GCAATGTCTCAAGGAAATGAATTCAAGAGTTTTCAAAGGTGGAAAGGGTTTCATTTGTAG