Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g007480.1.1
CDS Infomation	LOW QUALITY:Phytochrome kinase substrate protein, putative (AHRD V3.3 *** G7KDX6_MEDTR)
Sequence	ATGGCTATGGTCAAACTAGAAGCTACCAAAAATACTACTACAAATCTTCTTGATCCTTCA TTTTCTTCTTATTTGATCAATGGTACTGAAAAAACCATTGTACTTAATCTTGAATCAAGT AAGAAGATAGATGATGGTGAAATAGACATATTTAGTGCAGAAAAATACTTCAATGAAGGG GTTGATGAAGTAAACAATGTGAGACAAAACAAACACAAGATTCATAATGATCAACCTGTT GTCGCTGATATAGTTTCTTTGCAGCAAAAGATCAGACCTTCAACACCAAGTGTTCATTCA GAATCAAGTTGGAATAGCAGAAGTGCATTGTTGCAGAAAGTTACAAGAAATTATCAGCAG CAGCAGCAGCAGCATCAAGCACCGCGGCCAATAAAGACGACTAAAAACAAGTCTTATGGA AAGAAATTCCTTGCTAGATTTGGCTGCAATTGTTACTGCAAAGACAAGAACTCTGTTGAG ATTGATGATCAACTCCGCGAAAAAAGTTTCAAATCAAAATCAAAGAAGACTAGTACAATA GGAGCTAATCATCAAGATTTGCACTTCAAGAGAATTGATGATTCAGGAGTAGTTGGATTG AAATCAGATGAGCGTTTCGTCGTTCCTGTTTATGATCCTAAAGGTGGGAATGGGATACAA ATGATCAAAAAGGAAACAGAAGAAGAGGAATCAAGAAAGTCACTAGAAGTGTTTGGCTTT TCAATAACAGAGAAAGAAAGAAGCAAAATGAGTCTTGAGAAGAACATAGGCATGTTAACA TGGGATGCAATTGTTCCGAAAGCTGAAGAAATCGACATTATCAACATAGGTGCAAGTTCA AATGGAACCTATGAAGAAGATTACGCAGAAAGTGATGCAAGTTCAGACTTGTTTGAAATC GAAAGCTTCCCAAGTAACAATACAGCTAATCAAAGTCTAGTTAGACAGGGCTCAGATAGT ATGTCATGTTATGCTCCAAGTGAAGTTAGCATTGATTGGAGTGTTGTAACTGCTAGTGCA GCAGATTTCTCTATGATGTCTGATATAGAAGAAGTTAAAATACCCTCAATTAGAACCAAT AACAACTCCAATGGAAGAGACAAGGCTAAACGTCGTTCGAGCATTTTGTTGGGATGTAAT AATCATAAAGCTGTAGGAGTTGTGGGAGATGCATATAAATCTAGTGAAAAATCATCAATT GAGATGCATCAGAGGACTTATGAGCCTATTATGCCAATGACAAGGTTTCATGCTGAGAGC AAAGTGAATCGATTCGATGGAGGAAATAAGAAACATGATTTTACTACAAGATCATTTGCT ACTACATATTCTGGACGTCCTGCAGATTTCTTGTATGCTTAG

Peptide Sequence

PEP ID	Solyc05g007480.1.1
PEP Infomation	LOW QUALITY:Phytochrome kinase substrate protein, putative (AHRD V3.3 *** G7KDX6_MEDTR)
Sequence	MAMVKLEATKNTTTNLLDPSFSSYLINGTEKTIVLNLESSKKIDDGEIDIFSAEKYFNEG VDEVNNVRQNKHKIHNDQPVVADIVSLQQKIRPSTPSVHSESSWNSRSALLQKVTRNYQQ QQQQHQAPRPIKTTKNKSYGKKFLARFGCNCYCKDKNSVEIDDQLREKSFKSKSKKTSTI GANHQDLHFKRIDDSGVVGLKSDERFVVPVYDPKGGNGIQMIKKETEEEESRKSLEVFGF SITEKERSKMSLEKNIGMLTWDAIVPKAEEIDIINIGASSNGTYEEDYAESDASSDLFEI ESFPSNNTANQSLVRQGSDSMSCYAPSEVSIDWSVVTASAADFSMMSDIEEVKIPSIRTN NNSNGRDKAKRRSSILLGCNNHKAVGVVGDAYKSSEKSSIEMHQRTYEPIMPMTRFHAES KVNRFDGGNKKHDFTTRSFATTYSGRPADFLYA*

Transcript Sequence

Transcript ID	Solyc05g007480.1.1
Transcript Infomation	LOW QUALITY:Phytochrome kinase substrate protein, putative (AHRD V3.3 *** G7KDX6_MEDTR)
Sequence	ATGGCTATGGTCAAACTAGAAGCTACCAAAAATACTACTACAAATCTTCTTGATCCTTCA TTTTCTTCTTATTTGATCAATGGTACTGAAAAAACCATTGTACTTAATCTTGAATCAAGT AAGAAGATAGATGATGGTGAAATAGACATATTTAGTGCAGAAAAATACTTCAATGAAGGG GTTGATGAAGTAAACAATGTGAGACAAAACAAACACAAGATTCATAATGATCAACCTGTT GTCGCTGATATAGTTTCTTTGCAGCAAAAGATCAGACCTTCAACACCAAGTGTTCATTCA GAATCAAGTTGGAATAGCAGAAGTGCATTGTTGCAGAAAGTTACAAGAAATTATCAGCAG CAGCAGCAGCAGCATCAAGCACCGCGGCCAATAAAGACGACTAAAAACAAGTCTTATGGA AAGAAATTCCTTGCTAGATTTGGCTGCAATTGTTACTGCAAAGACAAGAACTCTGTTGAG ATTGATGATCAACTCCGCGAAAAAAGTTTCAAATCAAAATCAAAGAAGACTAGTACAATA GGAGCTAATCATCAAGATTTGCACTTCAAGAGAATTGATGATTCAGGAGTAGTTGGATTG AAATCAGATGAGCGTTTCGTCGTTCCTGTTTATGATCCTAAAGGTGGGAATGGGATACAA ATGATCAAAAAGGAAACAGAAGAAGAGGAATCAAGAAAGTCACTAGAAGTGTTTGGCTTT TCAATAACAGAGAAAGAAAGAAGCAAAATGAGTCTTGAGAAGAACATAGGCATGTTAACA TGGGATGCAATTGTTCCGAAAGCTGAAGAAATCGACATTATCAACATAGGTGCAAGTTCA AATGGAACCTATGAAGAAGATTACGCAGAAAGTGATGCAAGTTCAGACTTGTTTGAAATC GAAAGCTTCCCAAGTAACAATACAGCTAATCAAAGTCTAGTTAGACAGGGCTCAGATAGT ATGTCATGTTATGCTCCAAGTGAAGTTAGCATTGATTGGAGTGTTGTAACTGCTAGTGCA GCAGATTTCTCTATGATGTCTGATATAGAAGAAGTTAAAATACCCTCAATTAGAACCAAT AACAACTCCAATGGAAGAGACAAGGCTAAACGTCGTTCGAGCATTTTGTTGGGATGTAAT AATCATAAAGCTGTAGGAGTTGTGGGAGATGCATATAAATCTAGTGAAAAATCATCAATT GAGATGCATCAGAGGACTTATGAGCCTATTATGCCAATGACAAGGTTTCATGCTGAGAGC AAAGTGAATCGATTCGATGGAGGAAATAAGAAACATGATTTTACTACAAGATCATTTGCT ACTACATATTCTGGACGTCCTGCAGATTTCTTGTATGCTTAG