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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g007085.1.1
CDS Infomation

Pectate lyase (AHRD V3.3 *** K4BWN4_SOLLC)
Sequence

ATGGCCTCTATTAGTTTTAATAATTCAGTTATTTTTCTGTTTTCCCTTTTCTGTTTTTCT
TCTATAATCCCAAAATTATATGCTAATATTGCTGATTTTGATCCTTATTTGGAAAAAAGA
GCTGAAGAAGCCCTCCAATCTTCTCTTGCTGCTTATAATGAAAATCCTGAGGGTGTCACT
CAAATTTTCAACAAAGAAGTTGGAGAAACACTTCTCAATGGCACAAGGAGGCATTTGAAG
GAAAAAGATAAAGAGGACAAGAATGACAAGGATGATAAGGAAGGTGATGAAAAAAGTGTT
GATGGTTGCAAGGCATACAATCCAATTGACAAATGTTGGAGATGTGACAAAAACTGGGCT
AATAACAGGAAGGCACTAGCAGACTGTGCTAGGGGATTTGGTCATGGTACAACTGGTGGT
AAAGATGGTAGATTCTATGTTGTCACCGATCCATCGGATAACAACGTGGAGGAACCTGTT
CCTGGGACCCTACGTCACGCTGTCATCCAAGAGGAGCCATTGTGGATCATCTTCGAGAAG
TCGATGATCATCAGGTTGAAACAAGAACTTATGATCAACAGTAATAAGACAATTGATGGC
AGAGGTGTGTCTGTTCATGTTGCATATGGAGGTGGACTTACCTTACAATTTGTGCACAAT
GTGATTGTCCACAACATTAGAGTTCATCACATCCTTTCTAAGAATGGTGGTATGATTAGA
GATTCTGTTAAACATATTGGTCTTAGGACAGTGAGTGATGGTGATGCTATTTCCCTTTTC
GGTGCTAACCGTATCTGGATAGATCATTGTACTTTAACCAAGGGTGCTGATGGACTCCTC
GATGCAATCATGGCTTCCACTGCTATCACCATTTCTAACTGCAAATTCAACCATCACAAC
GACGTTATGCTTTTGGGAGCAAACGATGCCTTCCCACAAGATAAAATCATGCAAGTTACA
GTTGCATTCAATAGGTTCGGAAAGGGATGTATTCAAAGGATGCCAAGGTGCAGGTGGGGA
TTCTTCCACGTTGTCAACAACGACTACGCCAAATGGGAAATGTATGCTATTGGTGGCACA
GCTAACCCCACCATCATTAGCCAGGGTAACCGTTTCAAGGCTGCCGACAATCCCAACACT
AAAGAGGTGACAAACCGGAATGGTGCCCCAGAAGCTTTGTGGAGAAACTGGCAATGGAGA
TCCGAGGGTGATTTGTTCAAGAACGGAGCCTTCTTTAGGGAGTCTGGACCAGAAATCAAG
AGCACTCCATTCACAGAACATACCACAATCCAATTTGAGCCTGCTAAATTTGTAGGTAGA
CTCACTCGCAAGGCTGGTGTAATCCAGTGCAAGATTGGAAAAGCATGCTAG

Peptide Sequence

PEP ID

Solyc05g007085.1.1
PEP Infomation

Pectate lyase (AHRD V3.3 *** K4BWN4_SOLLC)
Sequence

MASISFNNSVIFLFSLFCFSSIIPKLYANIADFDPYLEKRAEEALQSSLAAYNENPEGVT
QIFNKEVGETLLNGTRRHLKEKDKEDKNDKDDKEGDEKSVDGCKAYNPIDKCWRCDKNWA
NNRKALADCARGFGHGTTGGKDGRFYVVTDPSDNNVEEPVPGTLRHAVIQEEPLWIIFEK
SMIIRLKQELMINSNKTIDGRGVSVHVAYGGGLTLQFVHNVIVHNIRVHHILSKNGGMIR
DSVKHIGLRTVSDGDAISLFGANRIWIDHCTLTKGADGLLDAIMASTAITISNCKFNHHN
DVMLLGANDAFPQDKIMQVTVAFNRFGKGCIQRMPRCRWGFFHVVNNDYAKWEMYAIGGT
ANPTIISQGNRFKAADNPNTKEVTNRNGAPEALWRNWQWRSEGDLFKNGAFFRESGPEIK
STPFTEHTTIQFEPAKFVGRLTRKAGVIQCKIGKAC*

Transcript Sequence

Transcript ID

Solyc05g007085.1.1
Transcript Infomation

Pectate lyase (AHRD V3.3 *** K4BWN4_SOLLC)
Sequence

ATGGCCTCTATTAGTTTTAATAATTCAGTTATTTTTCTGTTTTCCCTTTTCTGTTTTTCT
TCTATAATCCCAAAATTATATGCTAATATTGCTGATTTTGATCCTTATTTGGAAAAAAGA
GCTGAAGAAGCCCTCCAATCTTCTCTTGCTGCTTATAATGAAAATCCTGAGGGTGTCACT
CAAATTTTCAACAAAGAAGTTGGAGAAACACTTCTCAATGGCACAAGGAGGCATTTGAAG
GAAAAAGATAAAGAGGACAAGAATGACAAGGATGATAAGGAAGGTGATGAAAAAAGTGTT
GATGGTTGCAAGGCATACAATCCAATTGACAAATGTTGGAGATGTGACAAAAACTGGGCT
AATAACAGGAAGGCACTAGCAGACTGTGCTAGGGGATTTGGTCATGGTACAACTGGTGGT
AAAGATGGTAGATTCTATGTTGTCACCGATCCATCGGATAACAACGTGGAGGAACCTGTT
CCTGGGACCCTACGTCACGCTGTCATCCAAGAGGAGCCATTGTGGATCATCTTCGAGAAG
TCGATGATCATCAGGTTGAAACAAGAACTTATGATCAACAGTAATAAGACAATTGATGGC
AGAGGTGTGTCTGTTCATGTTGCATATGGAGGTGGACTTACCTTACAATTTGTGCACAAT
GTGATTGTCCACAACATTAGAGTTCATCACATCCTTTCTAAGAATGGTGGTATGATTAGA
GATTCTGTTAAACATATTGGTCTTAGGACAGTGAGTGATGGTGATGCTATTTCCCTTTTC
GGTGCTAACCGTATCTGGATAGATCATTGTACTTTAACCAAGGGTGCTGATGGACTCCTC
GATGCAATCATGGCTTCCACTGCTATCACCATTTCTAACTGCAAATTCAACCATCACAAC
GACGTTATGCTTTTGGGAGCAAACGATGCCTTCCCACAAGATAAAATCATGCAAGTTACA
GTTGCATTCAATAGGTTCGGAAAGGGATGTATTCAAAGGATGCCAAGGTGCAGGTGGGGA
TTCTTCCACGTTGTCAACAACGACTACGCCAAATGGGAAATGTATGCTATTGGTGGCACA
GCTAACCCCACCATCATTAGCCAGGGTAACCGTTTCAAGGCTGCCGACAATCCCAACACT
AAAGAGGTGACAAACCGGAATGGTGCCCCAGAAGCTTTGTGGAGAAACTGGCAATGGAGA
TCCGAGGGTGATTTGTTCAAGAACGGAGCCTTCTTTAGGGAGTCTGGACCAGAAATCAAG
AGCACTCCATTCACAGAACATACCACAATCCAATTTGAGCCTGCTAAATTTGTAGGTAGA
CTCACTCGCAAGGCTGGTGTAATCCAGTGCAAGATTGGAAAAGCATGCTAGGCATGTTAT
ATGTACAATGTAATATTAATTATAATACATAAAACATATTGTACATTTCATTTTGGGGTT
TACATGGAGCCGAATATTTTTTTTTTGGGGGGGTTCTTTTACAGCAAGAGAAGAAGAAAA
CGGCTAAGACATCTATCTGTTTTCTCAGTTTTTTTCCGACTATTGCTTTCTTTCTTCTTC
CTAGCTGGTTTACTCTATAGGTGAAGCAGTGAAGATGGGGAAGAAAACGAAAAAAGTGGG
TTCTCTGGAGCTCAAGTTTATCTTTTTGTAACAGAAGTTTTGGTTTTTACGATTTTCTAA
TAAATGTAATTTTCCCTGTTTGAATTTCAATATAGGCTACATGTCTACCCAAGACTGAAA
TTTATTGTAATACAACCTATTCTATTACTTACTAGTCCCTCC