Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g007080.3.1
CDS Infomation	Alpha-amylase (AHRD V3.3 *** K4BWN3_SOLLC)
Sequence	ATGTCGACAGTTACTATGGAGCCTCTCGTCGGCCATTATCTCCGGCGAAGCCCAAAGCTA TATCCAAATCAGAAGAAAACCTCTCATTTTTCTCTAAATTTCTCTCGGAGGCCACTCTCC GGTACCGCAACTTTGAGATTCTGCGATTATCGGCGTAGCCGGACGGTACCTATCAGAGCT AGCTCCACCGATGCTGCCGTCATTGAGACGTCGGAACAGTCGGACGTAGTTTTTAAGGAG ACTTTCTCGTTGAAACGACCGGAAAGGGCTGAAGGAAAGATATCCATCAGATTGGATAAG GGGAAGGATGAAGAGAATTGGAACCTCACTGTGGGATGTAGTTTGCCAGGGAAATGGATC CTTCACTGGGGGGTCCATTATACAGATGACACTGGCAGTGAATGGGATCAACCTCCTCCA GAGATGCGGCCGTCAGGTTCAATTGCCATAAAGGATTATGCAATTGAAACTCCTTTGCAA GGAGACACATTTCAAGAGGTGAAGATCGACATAAGTTCTAAGTGGTCTATAGCAGCTATA AATTTTGTGTTGAAGGATGAGGAAACTGGAGTTTGGTATCAGCACAGAGGGCGGGACTTC AAGATTCCTCTTGTTGACTGCCTTGACAATGATGCTAATATCGTTGGTGTTAAAAAGGAG TCGAACATATGGTCAGGATCACTAGGAAAGCTGTCCAACATACTCCTTAATCCAGAAGCT TCTCCTTCTAAAGGGGAATCAAGCAGCAATGAGGGGTCTAGTGCGAAAAACTGGCGTCTT GAAGGGTTTTATGAGGAGCATGCCATAGTAAAAGAGACTCTTGTCGATAACATAGTTAAT GTCTCTGTTAAGCTGTGTCCAGAGACTGCTAAGAATATTTTGTGTATAGATACTGACTTA CCTGGAAATGTAATTCTTCACTGGGGAATCTGCAAAGGTGATACTAAAATATGGGAACTT CCTGCAATGCCATATCCAGCGGAAACAGTAGTGTTCAAGAATAAGGCACTGCGGACTTTG CTGCAGAGAAAAGAGGGAGGTAATGGTTCTTCGGGACTGTTTACTTTGGATGTAGGACTT GCCGGATTTGTTTTTGTGGTGAAGCTAGATGAAAATACGTGGTTGAATTGTAAGGGAGAT GACTTTTATGTACCTCTGTCAAGTGGCACATTACATTTGGAGGAAAGTAAACAAAGCGAG GAGTCAAATTCTTCCCAGATAGTCAATCGTACGCCTGAGGAGAGCCAAATAGGCTCTGTG TATACTGATGAAATAATAAAAGAGATAAGGAGTTTGGTGAGTGACATTTCTTCTGAAAAG AGCCGAAAGACAAAAAATAGGGAAACACAGGAAACCATTCTTCAAGAAATTGAGAAGCTG GCTGCTGAAGCTTATGGTATATTCAGAAGTTCAATCCCAACAATACTAGAAACTGTTGTT TCTGACTCTGAGGTTGTACAACCTGACGTGAAAGTAACTTCAGGAACTGGTACAGGATTT GAAATTTTGTGCCAGGGTTTTAATTGGGAATCTCATAAATCCGGAAGATGGTACAAGGAG CTGCATGATAAAGCTGCAGAGTTATCTTCACTTGGTTTCAGTGTGATCTGGTTACCTCCA CCAACTGACTCAGTGTCACCAGAGGGATACATGCCTAGGGATTTATATAACTTAAATTCC AGATATGGTAGTTTTGATGAATTGAAAGTTACAGTAAAGAAATTCCATGAAGTGGGCATC AAGGTTCTTGGTGATGTTGTCTTAAATCATAGATGTGCAAGTGAACGGAATCAAAATGGT ATATGGAATATCTTTGGTGGTCGGTTAAATTGGGATGAGCGTGCAGTTGTTGCAGATGAT CCACATTTCCAGGGAAGGGGCAACAAAAGTAGTGGAGATAATTTCCATGCTGCTCCTAAC ATTGATCATTCCCAGGAATTCGTGAGAAAGGATATCAGGGAATGGTTACTCTGGCTGAGG GAGGAGATTGGTTATGATGGATGGAGGCTTGATTTTGTTCGTGGGTTTTGGGGTGGTTAT GTGAAGGATTACTTGGAAGCAACTGAACCTTACTTCGCTGTAGGCGAGTTTTGGGATTCC CTCGTTTATACTTATGGAGAGATGGATCACAATCAAGATGCGCATAGGCAGAGAATTATT GACTGGATTAATGCTACTAATGGAACTGCAGGAGCATTTGACGTGACAACGAAGGGAATT CTTCATTCTGCAATTGAGAGATGTGAATACTGGCGACTATCCGATCAGAAGGGGAAACCT CCCGGCGTTGTTGGATGGTGGCCATCTCGTGCTGTTACATTTATAGAGAATCATGATACA GGTTCTACACAGGGTCATTGGAGATTTCCTGGTGGGAAAGAGATGCAAGGTTATGCCTAT ATCCTGACTCACCCTGGAACCCCGTCAGTCTTCTTTGATCACATTTTCTCTGGTTACCGA TCTGAAATAGGAAATCTTATATCACTCAGAAAGCGGAACAAGATTAACTGTCGGAGTTTG GTGGATATCACAAAAGCCGAAAGGGATGTTTACGCAGCAGTTATTGACGATAAGCTGGCT GTCAAAATAGGACCAGGCCACTACGAGCCTCCAAGTGGGCATCAGAGATGGAAAACGGCT GCTGAGGGTAACAATTATAAGGTTTGGGAATTGTCATGA

Peptide Sequence

PEP ID	Solyc05g007080.3.1
PEP Infomation	Alpha-amylase (AHRD V3.3 *** K4BWN3_SOLLC)
Sequence	MSTVTMEPLVGHYLRRSPKLYPNQKKTSHFSLNFSRRPLSGTATLRFCDYRRSRTVPIRA SSTDAAVIETSEQSDVVFKETFSLKRPERAEGKISIRLDKGKDEENWNLTVGCSLPGKWI LHWGVHYTDDTGSEWDQPPPEMRPSGSIAIKDYAIETPLQGDTFQEVKIDISSKWSIAAI NFVLKDEETGVWYQHRGRDFKIPLVDCLDNDANIVGVKKESNIWSGSLGKLSNILLNPEA SPSKGESSSNEGSSAKNWRLEGFYEEHAIVKETLVDNIVNVSVKLCPETAKNILCIDTDL PGNVILHWGICKGDTKIWELPAMPYPAETVVFKNKALRTLLQRKEGGNGSSGLFTLDVGL AGFVFVVKLDENTWLNCKGDDFYVPLSSGTLHLEESKQSEESNSSQIVNRTPEESQIGSV YTDEIIKEIRSLVSDISSEKSRKTKNRETQETILQEIEKLAAEAYGIFRSSIPTILETVV SDSEVVQPDVKVTSGTGTGFEILCQGFNWESHKSGRWYKELHDKAAELSSLGFSVIWLPP PTDSVSPEGYMPRDLYNLNSRYGSFDELKVTVKKFHEVGIKVLGDVVLNHRCASERNQNG IWNIFGGRLNWDERAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDIREWLLWLR EEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEFWDSLVYTYGEMDHNQDAHRQRII DWINATNGTAGAFDVTTKGILHSAIERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDT GSTQGHWRFPGGKEMQGYAYILTHPGTPSVFFDHIFSGYRSEIGNLISLRKRNKINCRSL VDITKAERDVYAAVIDDKLAVKIGPGHYEPPSGHQRWKTAAEGNNYKVWELS*

Transcript Sequence

Transcript ID	Solyc05g007080.3.1
Transcript Infomation	Alpha-amylase (AHRD V3.3 *** K4BWN3_SOLLC)
Sequence	TTCGTTCTCTCTTTTTTTTTTCTCATGATTTTCAGGTGAGATCTACTGATCGGAAAAAAT GTCGACAGTTACTATGGAGCCTCTCGTCGGCCATTATCTCCGGCGAAGCCCAAAGCTATA TCCAAATCAGAAGAAAACCTCTCATTTTTCTCTAAATTTCTCTCGGAGGCCACTCTCCGG TACCGCAACTTTGAGATTCTGCGATTATCGGCGTAGCCGGACGGTACCTATCAGAGCTAG CTCCACCGATGCTGCCGTCATTGAGACGTCGGAACAGTCGGACGTAGTTTTTAAGGAGAC TTTCTCGTTGAAACGACCGGAAAGGGCTGAAGGAAAGATATCCATCAGATTGGATAAGGG GAAGGATGAAGAGAATTGGAACCTCACTGTGGGATGTAGTTTGCCAGGGAAATGGATCCT TCACTGGGGGGTCCATTATACAGATGACACTGGCAGTGAATGGGATCAACCTCCTCCAGA GATGCGGCCGTCAGGTTCAATTGCCATAAAGGATTATGCAATTGAAACTCCTTTGCAAGG AGACACATTTCAAGAGGTGAAGATCGACATAAGTTCTAAGTGGTCTATAGCAGCTATAAA TTTTGTGTTGAAGGATGAGGAAACTGGAGTTTGGTATCAGCACAGAGGGCGGGACTTCAA GATTCCTCTTGTTGACTGCCTTGACAATGATGCTAATATCGTTGGTGTTAAAAAGGAGTC GAACATATGGTCAGGATCACTAGGAAAGCTGTCCAACATACTCCTTAATCCAGAAGCTTC TCCTTCTAAAGGGGAATCAAGCAGCAATGAGGGGTCTAGTGCGAAAAACTGGCGTCTTGA AGGGTTTTATGAGGAGCATGCCATAGTAAAAGAGACTCTTGTCGATAACATAGTTAATGT CTCTGTTAAGCTGTGTCCAGAGACTGCTAAGAATATTTTGTGTATAGATACTGACTTACC TGGAAATGTAATTCTTCACTGGGGAATCTGCAAAGGTGATACTAAAATATGGGAACTTCC TGCAATGCCATATCCAGCGGAAACAGTAGTGTTCAAGAATAAGGCACTGCGGACTTTGCT GCAGAGAAAAGAGGGAGGTAATGGTTCTTCGGGACTGTTTACTTTGGATGTAGGACTTGC CGGATTTGTTTTTGTGGTGAAGCTAGATGAAAATACGTGGTTGAATTGTAAGGGAGATGA CTTTTATGTACCTCTGTCAAGTGGCACATTACATTTGGAGGAAAGTAAACAAAGCGAGGA GTCAAATTCTTCCCAGATAGTCAATCGTACGCCTGAGGAGAGCCAAATAGGCTCTGTGTA TACTGATGAAATAATAAAAGAGATAAGGAGTTTGGTGAGTGACATTTCTTCTGAAAAGAG CCGAAAGACAAAAAATAGGGAAACACAGGAAACCATTCTTCAAGAAATTGAGAAGCTGGC TGCTGAAGCTTATGGTATATTCAGAAGTTCAATCCCAACAATACTAGAAACTGTTGTTTC TGACTCTGAGGTTGTACAACCTGACGTGAAAGTAACTTCAGGAACTGGTACAGGATTTGA AATTTTGTGCCAGGGTTTTAATTGGGAATCTCATAAATCCGGAAGATGGTACAAGGAGCT GCATGATAAAGCTGCAGAGTTATCTTCACTTGGTTTCAGTGTGATCTGGTTACCTCCACC AACTGACTCAGTGTCACCAGAGGGATACATGCCTAGGGATTTATATAACTTAAATTCCAG ATATGGTAGTTTTGATGAATTGAAAGTTACAGTAAAGAAATTCCATGAAGTGGGCATCAA GGTTCTTGGTGATGTTGTCTTAAATCATAGATGTGCAAGTGAACGGAATCAAAATGGTAT ATGGAATATCTTTGGTGGTCGGTTAAATTGGGATGAGCGTGCAGTTGTTGCAGATGATCC ACATTTCCAGGGAAGGGGCAACAAAAGTAGTGGAGATAATTTCCATGCTGCTCCTAACAT TGATCATTCCCAGGAATTCGTGAGAAAGGATATCAGGGAATGGTTACTCTGGCTGAGGGA GGAGATTGGTTATGATGGATGGAGGCTTGATTTTGTTCGTGGGTTTTGGGGTGGTTATGT GAAGGATTACTTGGAAGCAACTGAACCTTACTTCGCTGTAGGCGAGTTTTGGGATTCCCT CGTTTATACTTATGGAGAGATGGATCACAATCAAGATGCGCATAGGCAGAGAATTATTGA CTGGATTAATGCTACTAATGGAACTGCAGGAGCATTTGACGTGACAACGAAGGGAATTCT TCATTCTGCAATTGAGAGATGTGAATACTGGCGACTATCCGATCAGAAGGGGAAACCTCC CGGCGTTGTTGGATGGTGGCCATCTCGTGCTGTTACATTTATAGAGAATCATGATACAGG TTCTACACAGGGTCATTGGAGATTTCCTGGTGGGAAAGAGATGCAAGGTTATGCCTATAT CCTGACTCACCCTGGAACCCCGTCAGTCTTCTTTGATCACATTTTCTCTGGTTACCGATC TGAAATAGGAAATCTTATATCACTCAGAAAGCGGAACAAGATTAACTGTCGGAGTTTGGT GGATATCACAAAAGCCGAAAGGGATGTTTACGCAGCAGTTATTGACGATAAGCTGGCTGT CAAAATAGGACCAGGCCACTACGAGCCTCCAAGTGGGCATCAGAGATGGAAAACGGCTGC TGAGGGTAACAATTATAAGGTTTGGGAATTGTCATGA