Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g007000.3.1
CDS Infomation

nitrate transporter 1:2 (AHRD V3.3 *** AT1G69850.1)
Sequence

ATGGAAATAGATAATCAAAACAATTGGGATAGCTATGTTGATTGGAAAAATAGACCAGCC
ATTAACAATCGTCATGGTGGCTTGCTTGCTGCCTCCTTTGTGTTAGGTGTTGAGGTGTTG
GAGAATTTGGCATTTTTGGCAAATGCAAGTAATTTGGTGTTGTATATGTCTGAGTACATG
CATTTTTCACCAACAAAATCAGCAAATTCTGTGACTAATTTTATGGGCACAGCATTTTTA
TTGGCACTTCTTGGTGGATTCTTATCTGATGCCTTCTTCACAACTTATTACATTTATCTC
ATCAGTGCACTCTTTGAATTTCTGGGACTTGTAATACTCACCATACAAGCTCGTTCGAGT
TCATTGAAGCCACCAAAATGTGATCTAAACAAGCCTTGTGAACAAGTTCATGGTGCACAA
GCTGCAATGTTGTTCATAGGACTCTACCTAGTGGCGTTAGGCGTTGGAGGTATAAAGGGA
TCACTAGCACCCCACGGTGCTGAACAGTTCGATGAATCAACCCCTCGTGAAAGAAAGCAT
AGATCAACTTTCTTCAATTACTTTGTGTTCTGTCTCTCCTTTGGAGCTCTGATTGCAGTC
ACATTCGTTGTTTGGATGGAAGACAATAAGGGTTGGCAATGGGGATTCGGAATCTCAACT
TCAGCTATATTTCTCTCAATCCCGATATTCCTTTCTGGTTCATCATTCTATCGGAACAAG
ATACCTCGTGGTAGCCCTCTTACAACGATCAGTAAGGTTATAATTGCAGCTGTATTAAAT
TCTAGTTCAAATTCATCGAAAAACTCAAGCACAGTCATTGCAAGTATGACTTCAAGTCCT
CCTCCTCCGGTTCCAACTAGCAAATCAATTGAGACAGCTCCATCGAGAAGCCTTAGCTTC
CTTAATCGGGCTGTTTCAGACACACCAGCATGTGGCGCGTTGAAATGCACAGTGCAACAA
GTGGAAGAAGTTAAGATTGTGATGAAACTGTTCCCGATTTTCGCCTGCACCATTATGCTC
AACTGTTGTCTAGCTCAACTAAATACATTCTCAGTCCATCAAGCAGCCTCGATGAACACA
CAGGTCGGTTCTTTAAAAGTCCCACCGGCTTCCCTCCCTGTTTTCCCCGTAGTATTCATC
ATGATCTTAGCTCCAGTTTACGATCACTTCATCATCCCATTTGCTCGTAGAGTAACCAAA
ACAGAAATGGGAATCTCACACCTCCAACGTATTGGTATCGGGTTGTTCCTATCCATCGTG
GCAATGGCAATCGCAGCCCTAGTTGAAATCAAACGTAAGAGAGTAGCTACTGACTCAGGA
CTCATCGACTCTGCTCAACCATTGCCTATAACATTCTTTTGGATCGCGTTTCAGTACTTA
TTTCTCGGGTCAGCTGATCTTTTCGTTCTAGCAGGACTACTAGAATTCTGTTTCTCAGAA
GCACCAGTGAGTATGAGATCATTGGCAACATCTCTCTCGTGGGCTTCTTTAGCTATCGGA
TACTACCTCAGCTCGGTGATTGTGTCTATTGTCAACCATGTAACAGGCATTTCAACGAAC
AAGCCATGGCTCGCGGGTAGAAACTTGAATCACTACCATTTGGACAGGTTCTACTGGCTA
ATGTGCATACTCAGTGCATTAAACTTTATGCACTACTTATTCTGGGCTACAAAATACAAG
TATACATCAGTCACATCTAGGCGTTGA

Peptide Sequence

PEP ID

Solyc05g007000.3.1
PEP Infomation

nitrate transporter 1:2 (AHRD V3.3 *** AT1G69850.1)
Sequence

MEIDNQNNWDSYVDWKNRPAINNRHGGLLAASFVLGVEVLENLAFLANASNLVLYMSEYM
HFSPTKSANSVTNFMGTAFLLALLGGFLSDAFFTTYYIYLISALFEFLGLVILTIQARSS
SLKPPKCDLNKPCEQVHGAQAAMLFIGLYLVALGVGGIKGSLAPHGAEQFDESTPRERKH
RSTFFNYFVFCLSFGALIAVTFVVWMEDNKGWQWGFGISTSAIFLSIPIFLSGSSFYRNK
IPRGSPLTTISKVIIAAVLNSSSNSSKNSSTVIASMTSSPPPPVPTSKSIETAPSRSLSF
LNRAVSDTPACGALKCTVQQVEEVKIVMKLFPIFACTIMLNCCLAQLNTFSVHQAASMNT
QVGSLKVPPASLPVFPVVFIMILAPVYDHFIIPFARRVTKTEMGISHLQRIGIGLFLSIV
AMAIAALVEIKRKRVATDSGLIDSAQPLPITFFWIAFQYLFLGSADLFVLAGLLEFCFSE
APVSMRSLATSLSWASLAIGYYLSSVIVSIVNHVTGISTNKPWLAGRNLNHYHLDRFYWL
MCILSALNFMHYLFWATKYKYTSVTSRR*

Transcript Sequence

Transcript ID

Solyc05g007000.3.1
Transcript Infomation

nitrate transporter 1:2 (AHRD V3.3 *** AT1G69850.1)
Sequence

AACCTAGATAACATCATTATCCATCTTTTCTCCTTTTTCATTCCCCCTTACAAAGGGGAC
TCTAGTACCTAACTATGTCATAATAATTATATTACAAAAAATACAAAATGAAAATTTTTT
TTATTTAAATTCTCTCTATTTTCTTTAATTTCAAAGTCTTATTTATATCTTCCTCTCTTC
TCACTTTCTCTCAACTCTTTATAAAATCACTATTATTTCATCATCTTAGATCTCTACAAC
ACTTTCTTTCAACTTAACTAATGGAAATAGATAATCAAAACAATTGGGATAGCTATGTTG
ATTGGAAAAATAGACCAGCCATTAACAATCGTCATGGTGGCTTGCTTGCTGCCTCCTTTG
TGTTAGGTGTTGAGGTGTTGGAGAATTTGGCATTTTTGGCAAATGCAAGTAATTTGGTGT
TGTATATGTCTGAGTACATGCATTTTTCACCAACAAAATCAGCAAATTCTGTGACTAATT
TTATGGGCACAGCATTTTTATTGGCACTTCTTGGTGGATTCTTATCTGATGCCTTCTTCA
CAACTTATTACATTTATCTCATCAGTGCACTCTTTGAATTTCTGGGACTTGTAATACTCA
CCATACAAGCTCGTTCGAGTTCATTGAAGCCACCAAAATGTGATCTAAACAAGCCTTGTG
AACAAGTTCATGGTGCACAAGCTGCAATGTTGTTCATAGGACTCTACCTAGTGGCGTTAG
GCGTTGGAGGTATAAAGGGATCACTAGCACCCCACGGTGCTGAACAGTTCGATGAATCAA
CCCCTCGTGAAAGAAAGCATAGATCAACTTTCTTCAATTACTTTGTGTTCTGTCTCTCCT
TTGGAGCTCTGATTGCAGTCACATTCGTTGTTTGGATGGAAGACAATAAGGGTTGGCAAT
GGGGATTCGGAATCTCAACTTCAGCTATATTTCTCTCAATCCCGATATTCCTTTCTGGTT
CATCATTCTATCGGAACAAGATACCTCGTGGTAGCCCTCTTACAACGATCAGTAAGGTTA
TAATTGCAGCTGTATTAAATTCTAGTTCAAATTCATCGAAAAACTCAAGCACAGTCATTG
CAAGTATGACTTCAAGTCCTCCTCCTCCGGTTCCAACTAGCAAATCAATTGAGACAGCTC
CATCGAGAAGCCTTAGCTTCCTTAATCGGGCTGTTTCAGACACACCAGCATGTGGCGCGT
TGAAATGCACAGTGCAACAAGTGGAAGAAGTTAAGATTGTGATGAAACTGTTCCCGATTT
TCGCCTGCACCATTATGCTCAACTGTTGTCTAGCTCAACTAAATACATTCTCAGTCCATC
AAGCAGCCTCGATGAACACACAGGTCGGTTCTTTAAAAGTCCCACCGGCTTCCCTCCCTG
TTTTCCCCGTAGTATTCATCATGATCTTAGCTCCAGTTTACGATCACTTCATCATCCCAT
TTGCTCGTAGAGTAACCAAAACAGAAATGGGAATCTCACACCTCCAACGTATTGGTATCG
GGTTGTTCCTATCCATCGTGGCAATGGCAATCGCAGCCCTAGTTGAAATCAAACGTAAGA
GAGTAGCTACTGACTCAGGACTCATCGACTCTGCTCAACCATTGCCTATAACATTCTTTT
GGATCGCGTTTCAGTACTTATTTCTCGGGTCAGCTGATCTTTTCGTTCTAGCAGGACTAC
TAGAATTCTGTTTCTCAGAAGCACCAGTGAGTATGAGATCATTGGCAACATCTCTCTCGT
GGGCTTCTTTAGCTATCGGATACTACCTCAGCTCGGTGATTGTGTCTATTGTCAACCATG
TAACAGGCATTTCAACGAACAAGCCATGGCTCGCGGGTAGAAACTTGAATCACTACCATT
TGGACAGGTTCTACTGGCTAATGTGCATACTCAGTGCATTAAACTTTATGCACTACTTAT
TCTGGGCTACAAAATACAAGTATACATCAGTCACATCTAGGCGTTGAGACGCGTAGATAA
AACTTTCGTAGTTTTAATATATGGTTTCTTCTCTAGACTTCAATGTACAATGTGTCTGAT
GAATTGCTGGATTGAGACCAGCAAAGAGGTCAAAACAGAACTAGTTGTTGATCAATTGAT
TTTAATATCTTAAAGCTATTAAAATGCTCTTCTTTGTTTGATGATTTGTAATCACAAGTA
TTGTAATTACGGACTAAGTTGTTCT