Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g006950.3.1
CDS Infomation

Embryo yellow protein (AHRD V3.3 *** K4BWM1_SOLLC)
Sequence

ATGATGGTGGATCTGAGTTCCTTCTCCGACGAGAAATTTGATCCGAAAAAATGGATAAAC
TCAGCGTGCCAGTCACGGCATCCACAGGATCCACTGGACAAACACTTGATAGATCTGGAA
ATGAAGCTTCAGATGGTGTCTGAAGAGATCGCCGCTTCCCTGGAGGAGCAAAGCTCCGCC
GCACTCCTCCGTGTCCCCCGCGCTAATCGAGATGTCATCCGCCTTCGTGACGATGCTCTC
TCCCTTCGCTCCTCTCTCTCTGCCATCCTCCAAAAACTTAAAAAAGCTGAGGGATCATCT
GCTGAATCTGTAGCTACATTAGCAAAAGTTGATACGGTCAAGCGGAGAATGGAAGCTGCA
TATGAGACATTGCAGGATGCTGCTGGTTTAACTCAATTAAGCTCAACAGTGGAGGAGGTA
TTTGCTAGTGGTGACCTTCCACGAGCTGCAGAAACTCTGGCTAATATGAGGCACTGTTTG
TCTGCCGTTGGAGAGGTTGCTGAATTTGCCAATATTAGGAGGCAACTAGAAGTTTTAGAA
GACAGACTAGACTCAGTTGTCCAACCTCGACTGACAGATGCTCTAAGCAATCGAAAGGTT
GATGTTGCCCAAGAAATGCGTGCGATTCTTCTGAGAATTGGGAGATTCAAGTCGTTAGAG
ATGCACTACACCATGGTCCACCTTAAGCCAATAAAGCGGCTTTGGGAAGATTTTGACTTG
AGGCAGCAGGCCAATAAAGTTGCCAATGAAAAAAGTGAAATGGATAGACTATCAAATTCT
CAGGATTTTCAACCGTCCATGATATCATTCTCAAGTTGGCTGACTAGTTTCTACGATGAA
TTGTTGCTTTATCTTGAACAGGAGTGGAAGTGGTGTATGTTTGCCTTTCCAGAAGAATAC
AGAACTCTTGTACCAAGCCTACTAAATGAAGCAATGTCAACTATTGGTGTGAGTTTTGCA
TCACAGATCAATCTTGCCATTGGGGATGCCGTGACTGAGACAAAAACCTTGGCGAAAGGT
ATAATTGACATTTCAAATGGAGATTTGCCAAAAGGTGCCAAGATTCAGACTAAACATTTG
GAAGCCCTTATTGAACTTCATAATACAACAGGGAGCTTTGCTAGGAACATTCAACACCTG
TTTTCAGATGCCGATCCTCAAGTTTTTCTGGATGCTCTGAAGGCAGTGTACCTTCCTTAT
GAATTTTTCAAAAGGCGATATGGACAGATGGAGCGTGCAGTTCTCTCTAGTGAGATTGCA
GGACTTGATCTCAGAGGAGCTGCTGTTACTCTTGTGGGAGTCCAGGGAGTTGAACTTAGT
GAAACTGTACGAAGGATGGAAGAGTCAATTCCACAAGTCATTTTGCTTCTTGAGGCAGCA
GTTGAAAGATGCATCAACTTTACTGGTGGCTCTGAGGTGGATGAGTTAATTCTCGTGCTG
GATGATGTCATGCTACAGTATATTTCCACTTTGCAGGAGAATGTAAAATCACTGAGAGCT
GTTTGTGGACTGGATGTGGATGCTATTAGTACAAAGAAAGATGCAGGATCAGAAAGAAGG
GAAACAGCTTCAAATGCACGTAAAGTTGACTTCACATCAAGTGAGGAGGAGTGGTCATTT
GTTCAAGGTGCATTGCAGATCCTTACTGTTGCTGATTGTTTAACCAGCAGATCTTCAGTC
TTTGAAGCTTCCCTCAAGGCTACTCTTGCTAGGTTGAGTACAAGCCTCTCTTTCTCAGTT
TTTGGGTCAAGTATTGATCAGAACAAGCCAGATATAGTCAATGATGATGGAAATGGGCAA
TTATCTGTGGCTCGAAAAGCTGCCTTGGATGTGGCAGCTGTGAGACTGGTGGATATTCCT
GAAAAGGCTCGGAAGCTTCTTAATTTATTGGAGCAGTCTAAAGATCCCAGGTTCCATGCA
CTTCCAGTAGCATCACAACGAGTTACAGCTTTCTCAGACGCAGTCAATGAGCTTGTTTAC
GATGTTCTTATTTCAAAAATACGGCAGCAGTTCAATGATCTGTCACGGCTGCCCATATGG
TCATCTGTTGAAGAACATAGTCTAAGGCCCCTCCCAACCTTCAGTTCATACCCACAATCT
TATGTGACTGGCGTTGGTGAATATCTCCTTACGTTACCCCAACAACTAGAGCCACTTGTA
GAGAATATTTCCAACAGCGATCCCAATGCTGATGAAGCCCAGTACTTTGCAACTGAATGG
ATGTTCAAGGTTGCTGAAGGTGCCACGGCACTTTACATGGAACAGCTTCGAGGGATCCAG
TATATAACAGATCGTGGAGCACAACAACTCTCTGTTGATATCGAGTATCTAAGCAATGTA
CTATCAGCTCTATCAATGCCAATTCCTACATGTCTTGCTACATTCCAGACATGTTTTTCA
ACACCTAAAGATCAGCTCAAGGATCTTATAAAGTCAGATTCTGGGAATCAGCTTGATCTT
CCTACTGCTAACCTCGTCTGCAAGATGCGACGTATCAGTTTAGAATGA

Peptide Sequence

PEP ID

Solyc05g006950.3.1
PEP Infomation

Embryo yellow protein (AHRD V3.3 *** K4BWM1_SOLLC)
Sequence

MMVDLSSFSDEKFDPKKWINSACQSRHPQDPLDKHLIDLEMKLQMVSEEIAASLEEQSSA
ALLRVPRANRDVIRLRDDALSLRSSLSAILQKLKKAEGSSAESVATLAKVDTVKRRMEAA
YETLQDAAGLTQLSSTVEEVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRRQLEVLE
DRLDSVVQPRLTDALSNRKVDVAQEMRAILLRIGRFKSLEMHYTMVHLKPIKRLWEDFDL
RQQANKVANEKSEMDRLSNSQDFQPSMISFSSWLTSFYDELLLYLEQEWKWCMFAFPEEY
RTLVPSLLNEAMSTIGVSFASQINLAIGDAVTETKTLAKGIIDISNGDLPKGAKIQTKHL
EALIELHNTTGSFARNIQHLFSDADPQVFLDALKAVYLPYEFFKRRYGQMERAVLSSEIA
GLDLRGAAVTLVGVQGVELSETVRRMEESIPQVILLLEAAVERCINFTGGSEVDELILVL
DDVMLQYISTLQENVKSLRAVCGLDVDAISTKKDAGSERRETASNARKVDFTSSEEEWSF
VQGALQILTVADCLTSRSSVFEASLKATLARLSTSLSFSVFGSSIDQNKPDIVNDDGNGQ
LSVARKAALDVAAVRLVDIPEKARKLLNLLEQSKDPRFHALPVASQRVTAFSDAVNELVY
DVLISKIRQQFNDLSRLPIWSSVEEHSLRPLPTFSSYPQSYVTGVGEYLLTLPQQLEPLV
ENISNSDPNADEAQYFATEWMFKVAEGATALYMEQLRGIQYITDRGAQQLSVDIEYLSNV
LSALSMPIPTCLATFQTCFSTPKDQLKDLIKSDSGNQLDLPTANLVCKMRRISLE*

Transcript Sequence

Transcript ID

Solyc05g006950.3.1
Transcript Infomation

Embryo yellow protein (AHRD V3.3 *** K4BWM1_SOLLC)
Sequence

ACTTTCCAAACAGGTCCTAAATGTGGTGGTTTGAGACGTTGTCTAAGCAAAGCAAAGGCG
ATTACCAGTGATCGGCGGCAACGATGATGGTGGATCTGAGTTCCTTCTCCGACGAGAAAT
TTGATCCGAAAAAATGGATAAACTCAGCGTGCCAGTCACGGCATCCACAGGATCCACTGG
ACAAACACTTGATAGATCTGGAAATGAAGCTTCAGATGGTGTCTGAAGAGATCGCCGCTT
CCCTGGAGGAGCAAAGCTCCGCCGCACTCCTCCGTGTCCCCCGCGCTAATCGAGATGTCA
TCCGCCTTCGTGACGATGCTCTCTCCCTTCGCTCCTCTCTCTCTGCCATCCTCCAAAAAC
TTAAAAAAGCTGAGGGATCATCTGCTGAATCTGTAGCTACATTAGCAAAAGTTGATACGG
TCAAGCGGAGAATGGAAGCTGCATATGAGACATTGCAGGATGCTGCTGGTTTAACTCAAT
TAAGCTCAACAGTGGAGGAGGTATTTGCTAGTGGTGACCTTCCACGAGCTGCAGAAACTC
TGGCTAATATGAGGCACTGTTTGTCTGCCGTTGGAGAGGTTGCTGAATTTGCCAATATTA
GGAGGCAACTAGAAGTTTTAGAAGACAGACTAGACTCAGTTGTCCAACCTCGACTGACAG
ATGCTCTAAGCAATCGAAAGGTTGATGTTGCCCAAGAAATGCGTGCGATTCTTCTGAGAA
TTGGGAGATTCAAGTCGTTAGAGATGCACTACACCATGGTCCACCTTAAGCCAATAAAGC
GGCTTTGGGAAGATTTTGACTTGAGGCAGCAGGCCAATAAAGTTGCCAATGAAAAAAGTG
AAATGGATAGACTATCAAATTCTCAGGATTTTCAACCGTCCATGATATCATTCTCAAGTT
GGCTGACTAGTTTCTACGATGAATTGTTGCTTTATCTTGAACAGGAGTGGAAGTGGTGTA
TGTTTGCCTTTCCAGAAGAATACAGAACTCTTGTACCAAGCCTACTAAATGAAGCAATGT
CAACTATTGGTGTGAGTTTTGCATCACAGATCAATCTTGCCATTGGGGATGCCGTGACTG
AGACAAAAACCTTGGCGAAAGGTATAATTGACATTTCAAATGGAGATTTGCCAAAAGGTG
CCAAGATTCAGACTAAACATTTGGAAGCCCTTATTGAACTTCATAATACAACAGGGAGCT
TTGCTAGGAACATTCAACACCTGTTTTCAGATGCCGATCCTCAAGTTTTTCTGGATGCTC
TGAAGGCAGTGTACCTTCCTTATGAATTTTTCAAAAGGCGATATGGACAGATGGAGCGTG
CAGTTCTCTCTAGTGAGATTGCAGGACTTGATCTCAGAGGAGCTGCTGTTACTCTTGTGG
GAGTCCAGGGAGTTGAACTTAGTGAAACTGTACGAAGGATGGAAGAGTCAATTCCACAAG
TCATTTTGCTTCTTGAGGCAGCAGTTGAAAGATGCATCAACTTTACTGGTGGCTCTGAGG
TGGATGAGTTAATTCTCGTGCTGGATGATGTCATGCTACAGTATATTTCCACTTTGCAGG
AGAATGTAAAATCACTGAGAGCTGTTTGTGGACTGGATGTGGATGCTATTAGTACAAAGA
AAGATGCAGGATCAGAAAGAAGGGAAACAGCTTCAAATGCACGTAAAGTTGACTTCACAT
CAAGTGAGGAGGAGTGGTCATTTGTTCAAGGTGCATTGCAGATCCTTACTGTTGCTGATT
GTTTAACCAGCAGATCTTCAGTCTTTGAAGCTTCCCTCAAGGCTACTCTTGCTAGGTTGA
GTACAAGCCTCTCTTTCTCAGTTTTTGGGTCAAGTATTGATCAGAACAAGCCAGATATAG
TCAATGATGATGGAAATGGGCAATTATCTGTGGCTCGAAAAGCTGCCTTGGATGTGGCAG
CTGTGAGACTGGTGGATATTCCTGAAAAGGCTCGGAAGCTTCTTAATTTATTGGAGCAGT
CTAAAGATCCCAGGTTCCATGCACTTCCAGTAGCATCACAACGAGTTACAGCTTTCTCAG
ACGCAGTCAATGAGCTTGTTTACGATGTTCTTATTTCAAAAATACGGCAGCAGTTCAATG
ATCTGTCACGGCTGCCCATATGGTCATCTGTTGAAGAACATAGTCTAAGGCCCCTCCCAA
CCTTCAGTTCATACCCACAATCTTATGTGACTGGCGTTGGTGAATATCTCCTTACGTTAC
CCCAACAACTAGAGCCACTTGTAGAGAATATTTCCAACAGCGATCCCAATGCTGATGAAG
CCCAGTACTTTGCAACTGAATGGATGTTCAAGGTTGCTGAAGGTGCCACGGCACTTTACA
TGGAACAGCTTCGAGGGATCCAGTATATAACAGATCGTGGAGCACAACAACTCTCTGTTG
ATATCGAGTATCTAAGCAATGTACTATCAGCTCTATCAATGCCAATTCCTACATGTCTTG
CTACATTCCAGACATGTTTTTCAACACCTAAAGATCAGCTCAAGGATCTTATAAAGTCAG
ATTCTGGGAATCAGCTTGATCTTCCTACTGCTAACCTCGTCTGCAAGATGCGACGTATCA
GTTTAGAATGATGACTACTTCTTAGTCATCATGCTGTGTTGTTACTGCTGCAGAGAAATG
GTACAACACTAGACCTATTTGTTGTAGAGAGTTTTGTTTTTTTCTCCTTTCTCCATAGAT
AACAGTTGTGTTTACTTTCTAGACCTTGACAAATTTTTGTACAAGTACGTTCTAAAGTTA
TATGTGAAAGATATGATTTTTGTCAATAATT