Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g006780.3.1
CDS Infomation

Actin cross-linking protein, putative (AHRD V3.3 *** A0A061E7B5_THECC)
Sequence

ATGGATTTTTTCTACAAAGCCAAAGCTGTAAAATTAAAAAGTCATCTAGACAAATACCTT
GTAGCCGATGATGATCAAGAAAATATCCGACAAAGCCGAAACGGCTCATCAAGAAAAGCC
CGGTGGCTTGTTGAACTTGTTGAAGCCGAAAACAGCCACTTTATACGGCTTAAAAGTGGC
TCCGGCAAGTATCTCACGGCTTCCGACGAGCCGTTTCTTCTTGGCATGACCGGAAAAAAG
GTAATTCAAACTTTGCCCGAAGAAATGAAGGACTTGAGAATCGAATGGGAAGTAATAAGG
GATGGATTTCAAGTAAAATTAAGGGGTTTTGGAGGAAAATATTTACGTGCAAATGGAGGA
ATGCCACCATGGAGAAATAAAGTAACACATGATAATCCATATAGTGGTAGTACACAAAAT
TGGATTTTGTGGAACGTTGAACCTATTGATGTGCCCGAAAATGAATCGTTGACGGAATAT
TTAACTATGGTTTCAAGTTTTTCATCGATTTCTGATGAGCTTTTAAGCCTGGATTTAGGA
TCTCCGACTTCTGTACATTCAAGTTTTTCATTCTCACCTAGGAGGGCTAAGATTTCTTTA
CCAAAAAGATCAGCAATGGAGCTATTTCACAAAGCAAAAGCTGTTCGTTTACAGAGTCAC
CATGAGAAGTACTTAACAGCTGAAGAAGATGAAGAATCAGTGACTCAAGATCGTAACGGA
GCATCAAAAAACGCGAAATGGACAGTTGAATTTGTTGAAAAAACCGAAAATGTTATTCGA
TTGAAGAGTTGTTATGGGAAATATTTAACAGCTTCGAATCAGCCATTTCTTCTGGGTATG
ACTGGTAGAAAAGTTCTTCAAACTTTGCCTAATCGACTTGATTCTTCAATTGAATGGGAA
CCCATTAGAGAAGGACATCAAGTTAAGCTGAGGACGAGATATGGGCAATTTTTGAGGGGA
AATGGGGGTCTTCCTCCATGGAGAAATTCTGTTACTCATGATATTCCTCATAGGACGAAA
ACTCAAGATTGGGTTCTTTGGGATGTTCATGTTGTTGAAATTTTGGCGCATTCGACGGCG
GAGACGGTGGCGGAGACGACGGTGGTGGGTGGTAATTCTGATTCGTTTGCTTCTGAATCG
AGTTCTGCTACTACTACTGGTTCATCAAAATCTTACAGCTTTTCGAGACAAGAGTCAAGT
GATTCATTGATTAGTTCACCGCCTAAGTTGGTAGATGGAAGGCTTATATATTATCACGTT
ACGGATGAATTTGGAGAAATTGACGAAGGAGCCGAGGGACTTTGCATAACTTTTAAGGGA
AATAGTGTTGAGGATCTAAAGAAGAGATTGGAGGAGGAAACTGGGCTCGAGGATATTACT
GTGTGTACTCGGAGTGCTTTGAATGGGAAGCTTTATCCTCTCCGTTTGCAGCTTCCTCCC
AACAACGCAAATATGAACGTTATTATTTTGCCATCTTCATCTAAAGAAGCTAGTGATATT
GCATAA

Peptide Sequence

PEP ID

Solyc05g006780.3.1
PEP Infomation

Actin cross-linking protein, putative (AHRD V3.3 *** A0A061E7B5_THECC)
Sequence

MDFFYKAKAVKLKSHLDKYLVADDDQENIRQSRNGSSRKARWLVELVEAENSHFIRLKSG
SGKYLTASDEPFLLGMTGKKVIQTLPEEMKDLRIEWEVIRDGFQVKLRGFGGKYLRANGG
MPPWRNKVTHDNPYSGSTQNWILWNVEPIDVPENESLTEYLTMVSSFSSISDELLSLDLG
SPTSVHSSFSFSPRRAKISLPKRSAMELFHKAKAVRLQSHHEKYLTAEEDEESVTQDRNG
ASKNAKWTVEFVEKTENVIRLKSCYGKYLTASNQPFLLGMTGRKVLQTLPNRLDSSIEWE
PIREGHQVKLRTRYGQFLRGNGGLPPWRNSVTHDIPHRTKTQDWVLWDVHVVEILAHSTA
ETVAETTVVGGNSDSFASESSSATTTGSSKSYSFSRQESSDSLISSPPKLVDGRLIYYHV
TDEFGEIDEGAEGLCITFKGNSVEDLKKRLEEETGLEDITVCTRSALNGKLYPLRLQLPP
NNANMNVIILPSSSKEASDIA*

Transcript Sequence

Transcript ID

Solyc05g006780.3.1
Transcript Infomation

Actin cross-linking protein, putative (AHRD V3.3 *** A0A061E7B5_THECC)
Sequence

GTTAGAACTATATATTATATTACAAAATGAATATAAAATGGACTTTCTTGTCCCTCTAGT
CTCTTCCTTAATCAATTCAACAAAGAATACAAAAACCATCAAACAAAACCTATCTTTTCT
CCCCTTATATAAACAAAAAAAAAATCACTACAATTATTTAATTCTTCAATATTTGATTCC
TATACCCTTTCCATAATAAATCCATTATTAATATTCCTCTTCAATTTTTTTTTTTTACTT
AAATTCCATATATATTCATCACTAATTACAATTTTTTTTTATTAAAATGGATTTTTTCTA
CAAAGCCAAAGCTGTAAAATTAAAAAGTCATCTAGACAAATACCTTGTAGCCGATGATGA
TCAAGAAAATATCCGACAAAGCCGAAACGGCTCATCAAGAAAAGCCCGGTGGCTTGTTGA
ACTTGTTGAAGCCGAAAACAGCCACTTTATACGGCTTAAAAGTGGCTCCGGCAAGTATCT
CACGGCTTCCGACGAGCCGTTTCTTCTTGGCATGACCGGAAAAAAGGTAATTCAAACTTT
GCCCGAAGAAATGAAGGACTTGAGAATCGAATGGGAAGTAATAAGGGATGGATTTCAAGT
AAAATTAAGGGGTTTTGGAGGAAAATATTTACGTGCAAATGGAGGAATGCCACCATGGAG
AAATAAAGTAACACATGATAATCCATATAGTGGTAGTACACAAAATTGGATTTTGTGGAA
CGTTGAACCTATTGATGTGCCCGAAAATGAATCGTTGACGGAATATTTAACTATGGTTTC
AAGTTTTTCATCGATTTCTGATGAGCTTTTAAGCCTGGATTTAGGATCTCCGACTTCTGT
ACATTCAAGTTTTTCATTCTCACCTAGGAGGGCTAAGATTTCTTTACCAAAAAGATCAGC
AATGGAGCTATTTCACAAAGCAAAAGCTGTTCGTTTACAGAGTCACCATGAGAAGTACTT
AACAGCTGAAGAAGATGAAGAATCAGTGACTCAAGATCGTAACGGAGCATCAAAAAACGC
GAAATGGACAGTTGAATTTGTTGAAAAAACCGAAAATGTTATTCGATTGAAGAGTTGTTA
TGGGAAATATTTAACAGCTTCGAATCAGCCATTTCTTCTGGGTATGACTGGTAGAAAAGT
TCTTCAAACTTTGCCTAATCGACTTGATTCTTCAATTGAATGGGAACCCATTAGAGAAGG
ACATCAAGTTAAGCTGAGGACGAGATATGGGCAATTTTTGAGGGGAAATGGGGGTCTTCC
TCCATGGAGAAATTCTGTTACTCATGATATTCCTCATAGGACGAAAACTCAAGATTGGGT
TCTTTGGGATGTTCATGTTGTTGAAATTTTGGCGCATTCGACGGCGGAGACGGTGGCGGA
GACGACGGTGGTGGGTGGTAATTCTGATTCGTTTGCTTCTGAATCGAGTTCTGCTACTAC
TACTGGTTCATCAAAATCTTACAGCTTTTCGAGACAAGAGTCAAGTGATTCATTGATTAG
TTCACCGCCTAAGTTGGTAGATGGAAGGCTTATATATTATCACGTTACGGATGAATTTGG
AGAAATTGACGAAGGAGCCGAGGGACTTTGCATAACTTTTAAGGGAAATAGTGTTGAGGA
TCTAAAGAAGAGATTGGAGGAGGAAACTGGGCTCGAGGATATTACTGTGTGTACTCGGAG
TGCTTTGAATGGGAAGCTTTATCCTCTCCGTTTGCAGCTTCCTCCCAACAACGCAAATAT
GAACGTTATTATTTTGCCATCTTCATCTAAAGAAGCTAGTGATATTGCATAACCAAGAAG
GCCATTGTAGCCCTACTCGTGGAGCACTTATCGCGGATTGTTGCAGTAGATGGATTTTTG
TATCAGTAAAATCGCGTAAACGTGTATCTCCATTGTTTATTAAGCATTTGTATATAAGGT
TTTGAGTATTCAGAGAGATATACACAATATCTGCTCTTGATGTTAATATCATCATCATAC
ATATACACTTCCACAGAATAATTGAAAATTGAAATCTGGTGGAGTTTTTAGTTCATATTT
ACATTCTATGTGACATTTGGAAAAATTGCAAAATAGATATATAGTTGAACTACCACAACT
TACAAAAACAATAATTTACGACTAATCTTTTTATACTTTTAATGAAAAGTTTCACAAACA
TAAATTAGGTATAAAATTGTATAT