Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g006703.1.1
CDS Infomation	Pentatricopeptide repeat (PPR-like) superfamily protein (AHRD V3.3 *** A0A061EDB0_THECC)
Sequence	ATGTGTGATTTTATACATGGAGGAGAGCCATGGCATTTGCAAGCTTTAATGCAATACTTG GGTTCTGTGACAAAACACATGTCATTCTTTTCATATTCAACTAATTCTGCAGTTGCAAAG CGTTCTTGCCTAACTTTAACTGCCGCGAGATCTTTTCCAGATTATTCGCCTAAAAAACCC TCCATTAGAGACTTTGAACTTGTGCAGCACATATCGACTTCTATTAAGCAACGTTACTCT GAGCACGTTCGGCGTGTTTTAAAGCCCTTTGAATCAAAAATTAAACCTGACCACATCGTT TGGGTTCTCATGACCATAAAGAATGATTACAAACTGGTTATAGATTTCTTTGATTGGTGG TGTCAACGGAGGGACCCGTCAATTGAGGTCCGTTGTATTATCGTGCATATTGCTGCTGCA CAGAAAGATGCAAGGATAGTACATAGGCTTATTCATGATTTTTGGGCAAGACCCGGTGTA GATGTGACAGTTTTCTTCCCCCAGTTTCTTGAAAAGTTAATATACACTTATAAGGATTGG GGTTCTAATCCATTTGTTTTTGATATTTTCTTCCAAGTGCTTGTAGAGTTAGGAAGTCTA GATTATGGAAGAAAACTTTTTGATAAAATGTTGCACTATGGCTTAGTTCTATCTGTCTCT TCATGTAACTTTTTCCTTTCACGTCTCTCGCATGAGATTGAGGAGCACAAAATGATGCTA AAGGTCTTTAATGAATTTTCTGAAGTGGGTGTTTGCTGGGACAATGAATCTCATAATATA GTGATCCATTCTCTTTGTCGGATAGGGAAAGTTAAAGAAGCTCATAACTTACTCCTGCAA ATGGAGCTGAGGGGGTGTATGCCCGATGTTGTAAGTTACAGCACTGTGATTAATGGATAC TGTGCCGCTGGACAGCTTGAATCAGTGATGAAGATCATCGAAGAAATGCAAGTAAAAGGA TTGAAGCCAAATGCATTTACTTTTAACAGTATAATTCTTCTTTTGTCAAAGAGAGGGAAA GTGCATGATGCCGAGAAAATCCTGAGGGAGATGACTTCCCAGCGAATCACTGCGGATAAT GTTGTTTACACAACTCTTATAGATGGCTTCTGCAAAACTGGGAACATAAGTGCTGCATAC GGCCTGTTCAATGAGATGCAGAGTCTTAACATTAGCCCTGATTTGATAACATATACTACC CTTATTTCTGGTCTGTGTCAAACTGGAAATATTGTTGAAGCAGATAAGTTGTTGAATTAT ATGCTTGGCCGGGGGTTAGAACCTGACGAATTCATTTATACAACACTTATTGACGGTTAT TGCAAGGCAGGGGAGATAAGGACAGCCTTTTCTCTTCACAACAAAATGGTTCAGATGCAG TTTGTGCCAAATATTGTGACTTACACTACACTAGTAGATGGGCTTTGTAAACTAGGGGAA CTTGAAACAGCAAATGAACTTCTCCAAGAGATGTGCGGAAAGGGTCTTGAACTGAATATT TACACATACAACTCACTTGTTAATGGTTTTTGTAAAGCTGGAGATGTGAATCAAGCGTTG AAGTTGATGGAAGATATGGAAGCTGCAGGTATCTGTCCTGATGCTTTTACGTATACTACT CTAATGGATGCTTATTGTAAATTAGGAGAGATGGGCAAGGCTCATGGACTACTTCGTCAA ATGTTGCTTAGAGGGCTCCAACCCACAGTAGTTACATTCAACGTTCTGATGAATGGCTTT TGTATGTCAGGGATGCTAGAAGAGGGTGATAAACTGTTGAAGTGGATGTTGGAGAAGGGT ATAATACCAAATGCTATTACTTACAATTCTCTTATGAAGCAGTATAGTGTGCGAAATAAT ATGTGTATGACGTCAGAAATTTACAAGGGTATGCTGGACCAAGGAGTTGTACCAAATGCC AATACCTTTAACATATTGATACGAGGACATTGCAAAGCTAGAAATATGAAAGAGGCTTGG TTTTTGCACAAGGAAATGATCAAAAAGGGATTCACTCCGACATTAGAGACTTATCATGCA CTCATCAAAGGGTTTTTAAAGAGGAAAAAGTATTCTGAGGCGAAAGAATTGTTTGAAGAG ATGAGAAGATATGGTTTATTGGCAGATAAAGAATTTTACTCTATCTTTGCGGATATGAAC TATGAACAAGGGAACTTTGATTTGGCGCTTGAGCTTTGTGATGAAGCAGTAGAAAAATGT CTTACAGACAAGACTGATAACAGGAATGCATGA

Peptide Sequence

PEP ID	Solyc05g006703.1.1
PEP Infomation	Pentatricopeptide repeat (PPR-like) superfamily protein (AHRD V3.3 *** A0A061EDB0_THECC)
Sequence	MCDFIHGGEPWHLQALMQYLGSVTKHMSFFSYSTNSAVAKRSCLTLTAARSFPDYSPKKP SIRDFELVQHISTSIKQRYSEHVRRVLKPFESKIKPDHIVWVLMTIKNDYKLVIDFFDWW CQRRDPSIEVRCIIVHIAAAQKDARIVHRLIHDFWARPGVDVTVFFPQFLEKLIYTYKDW GSNPFVFDIFFQVLVELGSLDYGRKLFDKMLHYGLVLSVSSCNFFLSRLSHEIEEHKMML KVFNEFSEVGVCWDNESHNIVIHSLCRIGKVKEAHNLLLQMELRGCMPDVVSYSTVINGY CAAGQLESVMKIIEEMQVKGLKPNAFTFNSIILLLSKRGKVHDAEKILREMTSQRITADN VVYTTLIDGFCKTGNISAAYGLFNEMQSLNISPDLITYTTLISGLCQTGNIVEADKLLNY MLGRGLEPDEFIYTTLIDGYCKAGEIRTAFSLHNKMVQMQFVPNIVTYTTLVDGLCKLGE LETANELLQEMCGKGLELNIYTYNSLVNGFCKAGDVNQALKLMEDMEAAGICPDAFTYTT LMDAYCKLGEMGKAHGLLRQMLLRGLQPTVVTFNVLMNGFCMSGMLEEGDKLLKWMLEKG IIPNAITYNSLMKQYSVRNNMCMTSEIYKGMLDQGVVPNANTFNILIRGHCKARNMKEAW FLHKEMIKKGFTPTLETYHALIKGFLKRKKYSEAKELFEEMRRYGLLADKEFYSIFADMN YEQGNFDLALELCDEAVEKCLTDKTDNRNA*

Transcript Sequence

Transcript ID	Solyc05g006703.1.1
Transcript Infomation	Pentatricopeptide repeat (PPR-like) superfamily protein (AHRD V3.3 *** A0A061EDB0_THECC)
Sequence	ATGTGTGATTTTATACATGGAGGAGAGCCATGGCATTTGCAAGCTTTAATGCAATACTTG GGTTCTGTGACAAAACACATGTCATTCTTTTCATATTCAACTAATTCTGCAGTTGCAAAG CGTTCTTGCCTAACTTTAACTGCCGCGAGATCTTTTCCAGATTATTCGCCTAAAAAACCC TCCATTAGAGACTTTGAACTTGTGCAGCACATATCGACTTCTATTAAGCAACGTTACTCT GAGCACGTTCGGCGTGTTTTAAAGCCCTTTGAATCAAAAATTAAACCTGACCACATCGTT TGGGTTCTCATGACCATAAAGAATGATTACAAACTGGTTATAGATTTCTTTGATTGGTGG TGTCAACGGAGGGACCCGTCAATTGAGGTCCGTTGTATTATCGTGCATATTGCTGCTGCA CAGAAAGATGCAAGGATAGTACATAGGCTTATTCATGATTTTTGGGCAAGACCCGGTGTA GATGTGACAGTTTTCTTCCCCCAGTTTCTTGAAAAGTTAATATACACTTATAAGGATTGG GGTTCTAATCCATTTGTTTTTGATATTTTCTTCCAAGTGCTTGTAGAGTTAGGAAGTCTA GATTATGGAAGAAAACTTTTTGATAAAATGTTGCACTATGGCTTAGTTCTATCTGTCTCT TCATGTAACTTTTTCCTTTCACGTCTCTCGCATGAGATTGAGGAGCACAAAATGATGCTA AAGGTCTTTAATGAATTTTCTGAAGTGGGTGTTTGCTGGGACAATGAATCTCATAATATA GTGATCCATTCTCTTTGTCGGATAGGGAAAGTTAAAGAAGCTCATAACTTACTCCTGCAA ATGGAGCTGAGGGGGTGTATGCCCGATGTTGTAAGTTACAGCACTGTGATTAATGGATAC TGTGCCGCTGGACAGCTTGAATCAGTGATGAAGATCATCGAAGAAATGCAAGTAAAAGGA TTGAAGCCAAATGCATTTACTTTTAACAGTATAATTCTTCTTTTGTCAAAGAGAGGGAAA GTGCATGATGCCGAGAAAATCCTGAGGGAGATGACTTCCCAGCGAATCACTGCGGATAAT GTTGTTTACACAACTCTTATAGATGGCTTCTGCAAAACTGGGAACATAAGTGCTGCATAC GGCCTGTTCAATGAGATGCAGAGTCTTAACATTAGCCCTGATTTGATAACATATACTACC CTTATTTCTGGTCTGTGTCAAACTGGAAATATTGTTGAAGCAGATAAGTTGTTGAATTAT ATGCTTGGCCGGGGGTTAGAACCTGACGAATTCATTTATACAACACTTATTGACGGTTAT TGCAAGGCAGGGGAGATAAGGACAGCCTTTTCTCTTCACAACAAAATGGTTCAGATGCAG TTTGTGCCAAATATTGTGACTTACACTACACTAGTAGATGGGCTTTGTAAACTAGGGGAA CTTGAAACAGCAAATGAACTTCTCCAAGAGATGTGCGGAAAGGGTCTTGAACTGAATATT TACACATACAACTCACTTGTTAATGGTTTTTGTAAAGCTGGAGATGTGAATCAAGCGTTG AAGTTGATGGAAGATATGGAAGCTGCAGGTATCTGTCCTGATGCTTTTACGTATACTACT CTAATGGATGCTTATTGTAAATTAGGAGAGATGGGCAAGGCTCATGGACTACTTCGTCAA ATGTTGCTTAGAGGGCTCCAACCCACAGTAGTTACATTCAACGTTCTGATGAATGGCTTT TGTATGTCAGGGATGCTAGAAGAGGGTGATAAACTGTTGAAGTGGATGTTGGAGAAGGGT ATAATACCAAATGCTATTACTTACAATTCTCTTATGAAGCAGTATAGTGTGCGAAATAAT ATGTGTATGACGTCAGAAATTTACAAGGGTATGCTGGACCAAGGAGTTGTACCAAATGCC AATACCTTTAACATATTGATACGAGGACATTGCAAAGCTAGAAATATGAAAGAGGCTTGG TTTTTGCACAAGGAAATGATCAAAAAGGGATTCACTCCGACATTAGAGACTTATCATGCA CTCATCAAAGGGTTTTTAAAGAGGAAAAAGTATTCTGAGGCGAAAGAATTGTTTGAAGAG ATGAGAAGATATGGTTTATTGGCAGATAAAGAATTTTACTCTATCTTTGCGGATATGAAC TATGAACAAGGGAACTTTGATTTGGCGCTTGAGCTTTGTGATGAAGCAGTAGAAAAATGT CTTACAGACAAGACTGATAACAGGAATGCATGA