Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g006670.1.1
CDS Infomation	LOW QUALITY:Leucine-rich repeat receptor protein kinase family protein (AHRD V3.3 *** A0A061E5L2_THECC)
Sequence	ATGGCTTCTAAAGTTGTTTGTTTTCTTTTACTGCTAACTCTCACAACTATTTGTAAAAGT AAATCTTGTCATCCAAATGACTTAAAAGGTCTTCAAGATTTCAAGTCTGGGATTCATACA GACACTTCTGGTAGACTAAGTAAATGGATTGGCCGCGATTGTTGTAAATGGGAAGGTATA CTTTGTAGTAATTTAACTAAAAGAGTTGTAAGTATAAGTCTACCAGGTCTCTATACTTCA GATGATGCACCAATTCAATCTGTTATGGAAGGGGAATTGTCACCTTCAATCACACTAGTC AATTATCTTGAAGTTATCGATATAGGTGATCTTACTGGTATAACGGGGAAAATCCCTTCA TCGATTGGTTTACATCTATCGAATCTCAGAAAACTCAACTTATGTAGGAGCAAGTTTACT GGTGCATTACCAGAAAGCATTTGTGAGTTGTCTAAACTGGAAGAATTGTATCTCCAAGAG AATGGTTTTTCGGGATCTCTTCCCGAGTGTATAGGAGGTATCAAGAATCTAAGAAGAATG GATGTACATTCTAATAAACTTTCTGGTGTCATTCCTGAGTCTATAACAAAGTTGAAAAAA CTCGAAAGTTTGTGCCTTCAAGAGAATTTCTTGACAGGTAATATACCAGAAAACATTGGT AATATGCAAGAATTGAAAGAGGTTGATATGTCTAATAACACGTTAACGGGGATAATCCCT CGTTCTATTTCTAGACTAAAGTTTATGTCAGTGCTTTACCTGAACTCCAACCAGCTCGAG GGGGACATACCGTTGCCTTCAAAGCCTGGGGAACTGTCTTCTCTCAGCTTTGTAAGACTG CAGAACAATCGGCTTAGTGGAACGATACCTTCGTCTATTGGCTACTTGACATCCCTTCAG AGAGTTTCACTTGAAAACAATCAGCTAAACGGTTCTATTCCTTCTAGTATAGGTAATTTA AAGTCACTAGAAATGTTATATCTCAGTTACAACCAATTATCTGGTCAGTTGCCAAGATCA ATAGGCGGGATTTCTGAGCTTCTTTACCTGAGTATATCTCATAACATGATTGAAGGACCG TTACCTCGTGAAATTTCTTCCCTTTCAAATCTTCAATCGCTGGATCTTTCATTCAACCGT CTGAATATGTCAACCATTCCCAAGTGGCTCATGCAGTTGCCATCACTATCGCGAATTTAC TTGGCAGGATGTGAAATTCATGGTGAAATTCCAGATTACATACCAAAGTCATTGTTAGAA CTAGACTTGTCAGCTAACCATCTTTCAGGAAGGATACCAGCTTGGATTGGCAGCTTTTCG AAGATGTATTCATTAAACCTTTCAAAGAACAAGTTCGTGTCTGAGATTCCTTCAACTGTC ATGAATCTCGACATTCTGGGAGTGTTAGACCTTCACTCAAACAAGCTAGAAGGCAGTGTA AATGCAGTTTTCCAGATAAAGAGCAGGTTTGCACAAGGATCATTGACATATCTAGATCTG TCTGATAACAATTTCTCAAGTGGTGTCGAGCAGATTGGCATGGGAGGACAACAACATATC CAACACTTAAATTTATCGCGTAACTTTCTCAAAGGTAGATTACCAACCTCTGTAGGAACA TTGAAAACACTACAGACTTTGGATCTCAGTTACAATGGATTAGGAGCTAACCTGCCAACA TCTCTGGCCAACGTGACCGTTCTGGAGAGACTGATGCTGCACAAAAATCAATTCACTGGC AGAATCCCTGAGGAGTTTTTGAAGCTGAATAAACTGAAAGAATTGAACCTTTCAGATAAT CTTCTTGAAGGAAAAATACCTTATGGGAAGCCATTTCTTGATTTTCCGCAGAGTTCATTC TCTGGAAACAGAGGTTTATGTGGGAAACCACTTCTTCCCTGTAAATCTTGA

Peptide Sequence

PEP ID	Solyc05g006670.1.1
PEP Infomation	LOW QUALITY:Leucine-rich repeat receptor protein kinase family protein (AHRD V3.3 *** A0A061E5L2_THECC)
Sequence	MASKVVCFLLLLTLTTICKSKSCHPNDLKGLQDFKSGIHTDTSGRLSKWIGRDCCKWEGI LCSNLTKRVVSISLPGLYTSDDAPIQSVMEGELSPSITLVNYLEVIDIGDLTGITGKIPS SIGLHLSNLRKLNLCRSKFTGALPESICELSKLEELYLQENGFSGSLPECIGGIKNLRRM DVHSNKLSGVIPESITKLKKLESLCLQENFLTGNIPENIGNMQELKEVDMSNNTLTGIIP RSISRLKFMSVLYLNSNQLEGDIPLPSKPGELSSLSFVRLQNNRLSGTIPSSIGYLTSLQ RVSLENNQLNGSIPSSIGNLKSLEMLYLSYNQLSGQLPRSIGGISELLYLSISHNMIEGP LPREISSLSNLQSLDLSFNRLNMSTIPKWLMQLPSLSRIYLAGCEIHGEIPDYIPKSLLE LDLSANHLSGRIPAWIGSFSKMYSLNLSKNKFVSEIPSTVMNLDILGVLDLHSNKLEGSV NAVFQIKSRFAQGSLTYLDLSDNNFSSGVEQIGMGGQQHIQHLNLSRNFLKGRLPTSVGT LKTLQTLDLSYNGLGANLPTSLANVTVLERLMLHKNQFTGRIPEEFLKLNKLKELNLSDN LLEGKIPYGKPFLDFPQSSFSGNRGLCGKPLLPCKS*

Transcript Sequence

Transcript ID	Solyc05g006670.1.1
Transcript Infomation	LOW QUALITY:Leucine-rich repeat receptor protein kinase family protein (AHRD V3.3 *** A0A061E5L2_THECC)
Sequence	ATGGCTTCTAAAGTTGTTTGTTTTCTTTTACTGCTAACTCTCACAACTATTTGTAAAAGT AAATCTTGTCATCCAAATGACTTAAAAGGTCTTCAAGATTTCAAGTCTGGGATTCATACA GACACTTCTGGTAGACTAAGTAAATGGATTGGCCGCGATTGTTGTAAATGGGAAGGTATA CTTTGTAGTAATTTAACTAAAAGAGTTGTAAGTATAAGTCTACCAGGTCTCTATACTTCA GATGATGCACCAATTCAATCTGTTATGGAAGGGGAATTGTCACCTTCAATCACACTAGTC AATTATCTTGAAGTTATCGATATAGGTGATCTTACTGGTATAACGGGGAAAATCCCTTCA TCGATTGGTTTACATCTATCGAATCTCAGAAAACTCAACTTATGTAGGAGCAAGTTTACT GGTGCATTACCAGAAAGCATTTGTGAGTTGTCTAAACTGGAAGAATTGTATCTCCAAGAG AATGGTTTTTCGGGATCTCTTCCCGAGTGTATAGGAGGTATCAAGAATCTAAGAAGAATG GATGTACATTCTAATAAACTTTCTGGTGTCATTCCTGAGTCTATAACAAAGTTGAAAAAA CTCGAAAGTTTGTGCCTTCAAGAGAATTTCTTGACAGGTAATATACCAGAAAACATTGGT AATATGCAAGAATTGAAAGAGGTTGATATGTCTAATAACACGTTAACGGGGATAATCCCT CGTTCTATTTCTAGACTAAAGTTTATGTCAGTGCTTTACCTGAACTCCAACCAGCTCGAG GGGGACATACCGTTGCCTTCAAAGCCTGGGGAACTGTCTTCTCTCAGCTTTGTAAGACTG CAGAACAATCGGCTTAGTGGAACGATACCTTCGTCTATTGGCTACTTGACATCCCTTCAG AGAGTTTCACTTGAAAACAATCAGCTAAACGGTTCTATTCCTTCTAGTATAGGTAATTTA AAGTCACTAGAAATGTTATATCTCAGTTACAACCAATTATCTGGTCAGTTGCCAAGATCA ATAGGCGGGATTTCTGAGCTTCTTTACCTGAGTATATCTCATAACATGATTGAAGGACCG TTACCTCGTGAAATTTCTTCCCTTTCAAATCTTCAATCGCTGGATCTTTCATTCAACCGT CTGAATATGTCAACCATTCCCAAGTGGCTCATGCAGTTGCCATCACTATCGCGAATTTAC TTGGCAGGATGTGAAATTCATGGTGAAATTCCAGATTACATACCAAAGTCATTGTTAGAA CTAGACTTGTCAGCTAACCATCTTTCAGGAAGGATACCAGCTTGGATTGGCAGCTTTTCG AAGATGTATTCATTAAACCTTTCAAAGAACAAGTTCGTGTCTGAGATTCCTTCAACTGTC ATGAATCTCGACATTCTGGGAGTGTTAGACCTTCACTCAAACAAGCTAGAAGGCAGTGTA AATGCAGTTTTCCAGATAAAGAGCAGGTTTGCACAAGGATCATTGACATATCTAGATCTG TCTGATAACAATTTCTCAAGTGGTGTCGAGCAGATTGGCATGGGAGGACAACAACATATC CAACACTTAAATTTATCGCGTAACTTTCTCAAAGGTAGATTACCAACCTCTGTAGGAACA TTGAAAACACTACAGACTTTGGATCTCAGTTACAATGGATTAGGAGCTAACCTGCCAACA TCTCTGGCCAACGTGACCGTTCTGGAGAGACTGATGCTGCACAAAAATCAATTCACTGGC AGAATCCCTGAGGAGTTTTTGAAGCTGAATAAACTGAAAGAATTGAACCTTTCAGATAAT CTTCTTGAAGGAAAAATACCTTATGGGAAGCCATTTCTTGATTTTCCGCAGAGTTCATTC TCTGGAAACAGAGGTTTATGTGGGAAACCACTTCTTCCCTGTAAATCTTGA