Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g006560.1.1
CDS Infomation	glycosyltransferase family protein (DUF23) (AHRD V3.3 *** AT1G27200.1)
Sequence	ATGGATTCTTCAGAGCAACGTCGTAAGAGGAAAAGGATTTTGAGACCATCTTCAATATCA GCTCTTGTTTATTTTTTCTCTGTAAGGTCTTTTGTTTTATGTTTTAGTTTTTTGATTTTT GTTTTTCTTTTATCTTATCATATCCCTTTTAGTTCCTCTGTTTTTCGACCTGTTTTAGTT GTTTCAAGATTGTCTTTACTGTCATCTTCGTCTGATTTATTGTCTACTTCCTTGTCATTT CAAGATTTTGGTAGTAGTAGTAGTTCTTTATTGCATTTACAAATTGAGGGTCGAGTTTTG TTTCCTGATCATGTGTTGTTGTTTGTGAACAAAAATGAGTTATTCAGTAAAAATACGGAG TTTGAGTGTGTTTATGGTAGAAATAGTACTGGTGATGATGTTGGTATTGTAAAGGAGAAA TCGTATTCTGTAGATGTTTATGGCGATTTTGAATTTGGGGCTTTCGTTAGATGCCCGTTA CCTCGGGTTAATTATTCAGCTGTGGTGAATTTGAGGGAGTTGAGGGGAAATGGGAGTAAT CAGACTGTTAATTCTTGGGAAAATGTGGCTTATGCTGCAGCTTTGGATGGGAACACAGTA GTTGTGTTTGTGAAAGGATTGAATTTGAGGCCTGATAGAGAATCAGATTCGAGTCAGTTT AGTTGTTATTTTGGTTTGGGAAATTTCGAAAAAGAGGGGAGGTTTGCACTTAGGACAAAG GCGATAACGGCTGCTCAAGAGGTTGTGAGGTGTGCGTTGCCATTGAGTATTAGGAAGAAT CCTGAGAAGGCTCGAGGGATACGAATAACTATTGGTATGTTGTCTCATGTTCATGCTAGA GCTCATGAACACGTGCTTTTGCCTTCGGTAGCTAAGATTACTGAGTTGAAATCTGAGGGA AGGAGGGATGTTGAAAACGGGAAGTATGATCTTTGTGTGTGTACTATGGTGTGGAATCAA GGTTCAGCGCTTCGTGAATGGATTACATATCATTCTTGGCTTGGAGTTGAGAGGTGGTTT ATCTACGACAATAATAGCGATGACAATATCAAGGATGTGATTGAAGAGCTTGAGATTGAG AATTACAATGTTACACGACATGTTTGGCCGTGGATCAAGACTCAAGAAGCAGGCTTTTCG CATTGTGCTCTTAGAGCGAAGAAAGAATGTAATTGGGTATCGTTCATGGATGTGGATGAG TATTTCTACTTTCCGTATTCTACTCCAGGGCATCAATGTTTGAGAAGCTCAGGTTACGCG GGACAGGATTCCCTTCGATCCCTCGTGGCAAATGTATCATCATCTTCACCAGGAATTGCG GAGATTAGAACAACTTGCCATAGTTTTGGACCGTCTGGTCTGAATTCAGCTCCTTCTCAG GGTATCACTGTTGGATATACTTGTCGTCTTAAGAGTCCCGAGAGACACAAATCAATCATA CGTCCCGATGCTTTGGACACCACTCTCCTCAATGTGGTGCATCATTTCCACTTGAGGAAA GGATTTAGCTACATGAATTTGCCACAAAGTACTGCAGTGATAAACCACTACAAATACCAA GTGTGGGAGGTATTCAGGGCGAAATTTTTCAGACGAGTAGCTACATATGTCGTCGATTGG CAGAACAATCAAAATGAAGGATCAAGGGATAGAGCACCTGGTTTAGGGACAGAGGCCATT GAGCCACCAAATTGGCCATTACAATTCTGTGAAGTTTGGGATACCGGCCTTCGAGACTTT GTTTTGTCAAACTTTGCTGATTTATCAACTGGTTTGTTGCCTTGGGAGAAGTCTTCTTTC TAA

Peptide Sequence

PEP ID	Solyc05g006560.1.1
PEP Infomation	glycosyltransferase family protein (DUF23) (AHRD V3.3 *** AT1G27200.1)
Sequence	MDSSEQRRKRKRILRPSSISALVYFFSVRSFVLCFSFLIFVFLLSYHIPFSSSVFRPVLV VSRLSLLSSSSDLLSTSLSFQDFGSSSSSLLHLQIEGRVLFPDHVLLFVNKNELFSKNTE FECVYGRNSTGDDVGIVKEKSYSVDVYGDFEFGAFVRCPLPRVNYSAVVNLRELRGNGSN QTVNSWENVAYAAALDGNTVVVFVKGLNLRPDRESDSSQFSCYFGLGNFEKEGRFALRTK AITAAQEVVRCALPLSIRKNPEKARGIRITIGMLSHVHARAHEHVLLPSVAKITELKSEG RRDVENGKYDLCVCTMVWNQGSALREWITYHSWLGVERWFIYDNNSDDNIKDVIEELEIE NYNVTRHVWPWIKTQEAGFSHCALRAKKECNWVSFMDVDEYFYFPYSTPGHQCLRSSGYA GQDSLRSLVANVSSSSPGIAEIRTTCHSFGPSGLNSAPSQGITVGYTCRLKSPERHKSII RPDALDTTLLNVVHHFHLRKGFSYMNLPQSTAVINHYKYQVWEVFRAKFFRRVATYVVDW QNNQNEGSRDRAPGLGTEAIEPPNWPLQFCEVWDTGLRDFVLSNFADLSTGLLPWEKSSF *

Transcript Sequence

Transcript ID	Solyc05g006560.1.1
Transcript Infomation	glycosyltransferase family protein (DUF23) (AHRD V3.3 *** AT1G27200.1)
Sequence	ATGGATTCTTCAGAGCAACGTCGTAAGAGGAAAAGGATTTTGAGACCATCTTCAATATCA GCTCTTGTTTATTTTTTCTCTGTAAGGTCTTTTGTTTTATGTTTTAGTTTTTTGATTTTT GTTTTTCTTTTATCTTATCATATCCCTTTTAGTTCCTCTGTTTTTCGACCTGTTTTAGTT GTTTCAAGATTGTCTTTACTGTCATCTTCGTCTGATTTATTGTCTACTTCCTTGTCATTT CAAGATTTTGGTAGTAGTAGTAGTTCTTTATTGCATTTACAAATTGAGGGTCGAGTTTTG TTTCCTGATCATGTGTTGTTGTTTGTGAACAAAAATGAGTTATTCAGTAAAAATACGGAG TTTGAGTGTGTTTATGGTAGAAATAGTACTGGTGATGATGTTGGTATTGTAAAGGAGAAA TCGTATTCTGTAGATGTTTATGGCGATTTTGAATTTGGGGCTTTCGTTAGATGCCCGTTA CCTCGGGTTAATTATTCAGCTGTGGTGAATTTGAGGGAGTTGAGGGGAAATGGGAGTAAT CAGACTGTTAATTCTTGGGAAAATGTGGCTTATGCTGCAGCTTTGGATGGGAACACAGTA GTTGTGTTTGTGAAAGGATTGAATTTGAGGCCTGATAGAGAATCAGATTCGAGTCAGTTT AGTTGTTATTTTGGTTTGGGAAATTTCGAAAAAGAGGGGAGGTTTGCACTTAGGACAAAG GCGATAACGGCTGCTCAAGAGGTTGTGAGGTGTGCGTTGCCATTGAGTATTAGGAAGAAT CCTGAGAAGGCTCGAGGGATACGAATAACTATTGGTATGTTGTCTCATGTTCATGCTAGA GCTCATGAACACGTGCTTTTGCCTTCGGTAGCTAAGATTACTGAGTTGAAATCTGAGGGA AGGAGGGATGTTGAAAACGGGAAGTATGATCTTTGTGTGTGTACTATGGTGTGGAATCAA GGTTCAGCGCTTCGTGAATGGATTACATATCATTCTTGGCTTGGAGTTGAGAGGTGGTTT ATCTACGACAATAATAGCGATGACAATATCAAGGATGTGATTGAAGAGCTTGAGATTGAG AATTACAATGTTACACGACATGTTTGGCCGTGGATCAAGACTCAAGAAGCAGGCTTTTCG CATTGTGCTCTTAGAGCGAAGAAAGAATGTAATTGGGTATCGTTCATGGATGTGGATGAG TATTTCTACTTTCCGTATTCTACTCCAGGGCATCAATGTTTGAGAAGCTCAGGTTACGCG GGACAGGATTCCCTTCGATCCCTCGTGGCAAATGTATCATCATCTTCACCAGGAATTGCG GAGATTAGAACAACTTGCCATAGTTTTGGACCGTCTGGTCTGAATTCAGCTCCTTCTCAG GGTATCACTGTTGGATATACTTGTCGTCTTAAGAGTCCCGAGAGACACAAATCAATCATA CGTCCCGATGCTTTGGACACCACTCTCCTCAATGTGGTGCATCATTTCCACTTGAGGAAA GGATTTAGCTACATGAATTTGCCACAAAGTACTGCAGTGATAAACCACTACAAATACCAA GTGTGGGAGGTATTCAGGGCGAAATTTTTCAGACGAGTAGCTACATATGTCGTCGATTGG CAGAACAATCAAAATGAAGGATCAAGGGATAGAGCACCTGGTTTAGGGACAGAGGCCATT GAGCCACCAAATTGGCCATTACAATTCTGTGAAGTTTGGGATACCGGCCTTCGAGACTTT GTTTTGTCAAACTTTGCTGATTTATCAACTGGTTTGTTGCCTTGGGAGAAGTCTTCTTTC TAA