Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g006340.3.1
CDS Infomation	Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence	ATGGGTAAAATTCCATGTCCATTGCCATCTCCATCCAAGCAAAACTCAACAAATTCTGAT GAATTTCACCAAATTTACTCAGATTCATCATTAGCATTATCCAGATCATCTTCTTGCCTT TACTCACAGCCAAGTTTACCATCAATTCCTTCTTTAACTCCACTTTCAACTCATTCAGAA CTTTTATCAAACACCTTCTGTGCATCCACTTTTACTGGCCTTTCCTCCTCCGTTTTCTGC CTATCACTCGCCGGAAAACATCTCTACACCGGAACTTCCAACGGCGAAATCCTTCTACGG AACCAAGAGAAAAATCACTCCGTAGTAGTAGCTCAAAAACAGAGTAAGAGCTCTGTTAAA TCTATAGTTATTTTTGGGGATAAACTCTTCACTGCTCACCAAGATCATAAAATTCGTGTA TGGAAAATCGACAACCACGATCATAATCAAAGTAATTACAAATGCATTGCTACTCTACCG ACGCTGAATGATCGGTGTATGAGATTATTCAGCGCGAAAAACTACGTTGAAATTCGTAGA CATAAGAAATGTACATGGGTTCATCATGTTGATACAGTTTCAGCTCTAGCTATATCATCT GATAATACTCTGCTTTACTCTGCTTCATGGGATAGAACTTTCAAAATCTGGAGAATTTTG GATTTCAAATGCCTTGAATCAGTCTGGAATGCTCATGACGATGCCATTAACGCCATTGCT CTGTCGAAAAATGGGTATGTTTACACCGGTTCAGCAGACATGAAGATCAAAATATGGAAG AAAGAACGAGGGGAGAAGAGCGTACACACCCTTATATCAACACTAGAAAAACACAAATCA TCCGTAAATGCTTTAGCTCTTAGTACAGATGGTTCAATTTTATATTCAGGTGCTTGTGAT AGATCCATAATTGTATGGGAAAAAGATAGTGGTGGTGATAAAATGGTGGTGAGTGGAGCC TTAAGAGGACATACTAAGGCCATATTGTGTTTATCTGTGGTGGATGATTTGGTATGCAGT GGATCAGCAGATAAAACAGTGAGAATATGGATGAAAGGTATTGGAAAAAGTTATTCATGT TTGGCTGTTTTGGAAGGGCATAATGGTCCGGTAAAATGTTTAACCGCGAGTTCAGATAAT AGTAATAGTAATAGTAATAGCGATGATTTTGGTTGTGGAAATTCTTATGTGGTGTATAGT GGTAGTTTGGATTGTGATATTAAGGTTTGGAAAATTTGGGTTCCATGA

Peptide Sequence

PEP ID	Solyc05g006340.3.1
PEP Infomation	Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence	MGKIPCPLPSPSKQNSTNSDEFHQIYSDSSLALSRSSSCLYSQPSLPSIPSLTPLSTHSE LLSNTFCASTFTGLSSSVFCLSLAGKHLYTGTSNGEILLRNQEKNHSVVVAQKQSKSSVK SIVIFGDKLFTAHQDHKIRVWKIDNHDHNQSNYKCIATLPTLNDRCMRLFSAKNYVEIRR HKKCTWVHHVDTVSALAISSDNTLLYSASWDRTFKIWRILDFKCLESVWNAHDDAINAIA LSKNGYVYTGSADMKIKIWKKERGEKSVHTLISTLEKHKSSVNALALSTDGSILYSGACD RSIIVWEKDSGGDKMVVSGALRGHTKAILCLSVVDDLVCSGSADKTVRIWMKGIGKSYSC LAVLEGHNGPVKCLTASSDNSNSNSNSDDFGCGNSYVVYSGSLDCDIKVWKIWVP*

Transcript Sequence

Transcript ID	Solyc05g006340.3.1
Transcript Infomation	Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence	TCGACAATTAGTGTGAAACCAAAAGAGGTTTTATTTTTTTTTGCTTGCTAAAATGCGCTA CTATTCTGCTAAAATACGCTTTCACACCATATCTTTATAAAAAAAATAGCTAACAAAAAA ACAAAGCAAGATTCATTCATCTCTAAATTTGAACTGTTTCTAACCATTTTTTTTTTCAAG CAAAAGAAAATGGGTAAAATTCCATGTCCATTGCCATCTCCATCCAAGCAAAACTCAACA AATTCTGATGAATTTCACCAAATTTACTCAGATTCATCATTAGCATTATCCAGATCATCT TCTTGCCTTTACTCACAGCCAAGTTTACCATCAATTCCTTCTTTAACTCCACTTTCAACT CATTCAGAACTTTTATCAAACACCTTCTGTGCATCCACTTTTACTGGCCTTTCCTCCTCC GTTTTCTGCCTATCACTCGCCGGAAAACATCTCTACACCGGAACTTCCAACGGCGAAATC CTTCTACGGAACCAAGAGAAAAATCACTCCGTAGTAGTAGCTCAAAAACAGAGTAAGAGC TCTGTTAAATCTATAGTTATTTTTGGGGATAAACTCTTCACTGCTCACCAAGATCATAAA ATTCGTGTATGGAAAATCGACAACCACGATCATAATCAAAGTAATTACAAATGCATTGCT ACTCTACCGACGCTGAATGATCGGTGTATGAGATTATTCAGCGCGAAAAACTACGTTGAA ATTCGTAGACATAAGAAATGTACATGGGTTCATCATGTTGATACAGTTTCAGCTCTAGCT ATATCATCTGATAATACTCTGCTTTACTCTGCTTCATGGGATAGAACTTTCAAAATCTGG AGAATTTTGGATTTCAAATGCCTTGAATCAGTCTGGAATGCTCATGACGATGCCATTAAC GCCATTGCTCTGTCGAAAAATGGGTATGTTTACACCGGTTCAGCAGACATGAAGATCAAA ATATGGAAGAAAGAACGAGGGGAGAAGAGCGTACACACCCTTATATCAACACTAGAAAAA CACAAATCATCCGTAAATGCTTTAGCTCTTAGTACAGATGGTTCAATTTTATATTCAGGT GCTTGTGATAGATCCATAATTGTATGGGAAAAAGATAGTGGTGGTGATAAAATGGTGGTG AGTGGAGCCTTAAGAGGACATACTAAGGCCATATTGTGTTTATCTGTGGTGGATGATTTG GTATGCAGTGGATCAGCAGATAAAACAGTGAGAATATGGATGAAAGGTATTGGAAAAAGT TATTCATGTTTGGCTGTTTTGGAAGGGCATAATGGTCCGGTAAAATGTTTAACCGCGAGT TCAGATAATAGTAATAGTAATAGTAATAGCGATGATTTTGGTTGTGGAAATTCTTATGTG GTGTATAGTGGTAGTTTGGATTGTGATATTAAGGTTTGGAAAATTTGGGTTCCATGACTA TAGACTATAGAGTTTTTGTGATATCTTTGTCTCTTGTTTAGAGACTTGTAGTCATACTAA TATTTTGTTTTTCTTTTTTTTTTTGGTGTGCATAGAAATGAGAAATCTTCATTTTACCTA AGTTTTTTGAAAAAGAGAATTGTGAATGGATCAATCAAAAGGACCTACTTAACTAGTTTG TGTTGTTTGATGATTTTATCGATCGACTAGTCTAAAAGAGTGATTCGGAGGGTGTGGTAA ACCTATTTGATGGTAGAGATGACCTATTTTGGTATTAGTTAGTACCAATTATTGTAT