Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g006120.3.1
CDS Infomation

DNA polymerase lambda (AHRD V3.3 *** DPOLL_ARATH)
Sequence

ATGACGCGAAAGAAGGTTGAATCTCCGCCGCGTGATCCTAATGGAATGTTTTCCGGTATG
GTTGTCTTCTTTGTCGGAACCGGAGTTATGTCCCTCCGGCTACAGATATGGAAGAGGAAA
TTGTTGCAAATGGGGGCTATATTTAACGACCGGTTTACTGGAAATGTAACTCATGTTTTT
GCAAAGGATGCAAATTTGCTTCTTGAGAAATTTGATAAAGAACTTCTGATTCGCACCAAA
GCTAAATTTCTCTCGTATCAGTGGCTAGAGGACAGCTTAATACAAGGAGAAAAAGCATCT
GAGGATCTGTATGTCTTATCCCTGCAATCAGGAGGAGGAAAGTCCCTTAGTCCTAAAGCT
GATAATGACGGTCATTCTGATAATGACGGTCATTCTAGAGTTGCACTAAAGAAAAGTCGA
ATATCTGCTGAAGATGCCAAGAATTCATGCCCAAGACACGTTAATGACAATAAAGACCGT
GTTGATCCACGAGATACTAAAAGTGCCTCTTTACTTGCATCACACTCTTCAAGCCCAGAA
GTGACAAGTCCAGAGGCCATTCATTCTCTTAATAAGCCTGTTGGAACATCAGACTCATCT
TCACTTTATAAGCCTCCGGATTTAAACCGAAATATCACTCAGATATTCGGGAAGCTTCTC
AACATATATAGAGCACTGGGTGATGACCGGAGATCATTCAGCTATTATAAAGCTATACCA
GTTATTGAGAAACTGCCATTCAAAATTGAGAGTGTGGACCAGGTTAAGCACCTACCTTCT
ATTGGAAAGTCAATGCAAGATCATATTCAGGAGATAGTGACCACAGGAAAGCTGTCCAAA
TTGGAACACTTTGAGAAGGATGAAAAGGTAAAAACAATCAGCTTATTTGGAGAGGTTTGG
GGTGTTGGTCCATCTACTGCCCTAAAACTTTATGAGAAAGGACACCGAACTCTTGATGAC
CTTAGAAATGAGGAGTCACTGACTCGTTCTCAAAGGATAGGGTTGAAATATTTTGATGAC
ATCCAGACCAGGATTCAACGGCATGAGGTCAAAGAGATGGAACGTTTGCTACAGAAAGTT
GGAGAAGAAATTTTGCCTGGTGTGATTGTTGTGTGTGGAGGATCATATAGACGTGGAAAG
GCTTCTTGCGGTGATATGGATATTGTTATTACTCATCCTGATAGAAAAAGTCATGAAGGC
TTTCTTCCCAAGTTTGTAAGACGTCTAAAGGAGATCGAGTTTTTAAGAGAAGATTTGGTC
TTCACTGTTCATAGCACAGAGGGTACAGATTCAGGAGTTGACACATATTTTGGTCTCTGC
ACTTATCCTGGTCGAGAACTGCGACATCGTATTGACTTGAAGGTGTATCCAAGGGATATA
TATGCATTTGGACTGATAGCATGGACGGGAAATGACGTCTTGAATAGAAGACTTAGATTG
TTAGCTGAATCGAAGGGCTTCCTTTTGGATGATACAGGGCTATATCCAGCTACTCATAGT
TCTGCTGGAAAACGGACTAAAGGTAGTGCAAGCTTGAAGTTTGAAACTGAGAAGCAAGTG
TTCGAATTCCTTGGATTTCCCGCGCTGGAACCAAATGAAAGGAATCTATGA

Peptide Sequence

PEP ID

Solyc05g006120.3.1
PEP Infomation

DNA polymerase lambda (AHRD V3.3 *** DPOLL_ARATH)
Sequence

MTRKKVESPPRDPNGMFSGMVVFFVGTGVMSLRLQIWKRKLLQMGAIFNDRFTGNVTHVF
AKDANLLLEKFDKELLIRTKAKFLSYQWLEDSLIQGEKASEDLYVLSLQSGGGKSLSPKA
DNDGHSDNDGHSRVALKKSRISAEDAKNSCPRHVNDNKDRVDPRDTKSASLLASHSSSPE
VTSPEAIHSLNKPVGTSDSSSLYKPPDLNRNITQIFGKLLNIYRALGDDRRSFSYYKAIP
VIEKLPFKIESVDQVKHLPSIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVKTISLFGEVW
GVGPSTALKLYEKGHRTLDDLRNEESLTRSQRIGLKYFDDIQTRIQRHEVKEMERLLQKV
GEEILPGVIVVCGGSYRRGKASCGDMDIVITHPDRKSHEGFLPKFVRRLKEIEFLREDLV
FTVHSTEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRL
LAESKGFLLDDTGLYPATHSSAGKRTKGSASLKFETEKQVFEFLGFPALEPNERNL*

Transcript Sequence

Transcript ID

Solyc05g006120.3.1
Transcript Infomation

DNA polymerase lambda (AHRD V3.3 *** DPOLL_ARATH)
Sequence

ACAAGTATTTTATTTTTATTTATATAAAAATTTAAAAAGTAATTTTTTTTTTTTTTTTAG
CTTATAAAACAGTGTACGCTAGTATGAGAAGATATCAAAACTGAAACTTTGAGAAGAAGA
CTGTGATGACGCGAAAGAAGGTTGAATCTCCGCCGCGTGATCCTAATGGAATGTTTTCCG
GTATGGTTGTCTTCTTTGTCGGAACCGGAGTTATGTCCCTCCGGCTACAGATATGGAAGA
GGAAATTGTTGCAAATGGGGGCTATATTTAACGACCGGTTTACTGGAAATGTAACTCATG
TTTTTGCAAAGGATGCAAATTTGCTTCTTGAGAAATTTGATAAAGAACTTCTGATTCGCA
CCAAAGCTAAATTTCTCTCGTATCAGTGGCTAGAGGACAGCTTAATACAAGGAGAAAAAG
CATCTGAGGATCTGTATGTCTTATCCCTGCAATCAGGAGGAGGAAAGTCCCTTAGTCCTA
AAGCTGATAATGACGGTCATTCTGATAATGACGGTCATTCTAGAGTTGCACTAAAGAAAA
GTCGAATATCTGCTGAAGATGCCAAGAATTCATGCCCAAGACACGTTAATGACAATAAAG
ACCGTGTTGATCCACGAGATACTAAAAGTGCCTCTTTACTTGCATCACACTCTTCAAGCC
CAGAAGTGACAAGTCCAGAGGCCATTCATTCTCTTAATAAGCCTGTTGGAACATCAGACT
CATCTTCACTTTATAAGCCTCCGGATTTAAACCGAAATATCACTCAGATATTCGGGAAGC
TTCTCAACATATATAGAGCACTGGGTGATGACCGGAGATCATTCAGCTATTATAAAGCTA
TACCAGTTATTGAGAAACTGCCATTCAAAATTGAGAGTGTGGACCAGGTTAAGCACCTAC
CTTCTATTGGAAAGTCAATGCAAGATCATATTCAGGAGATAGTGACCACAGGAAAGCTGT
CCAAATTGGAACACTTTGAGAAGGATGAAAAGGTAAAAACAATCAGCTTATTTGGAGAGG
TTTGGGGTGTTGGTCCATCTACTGCCCTAAAACTTTATGAGAAAGGACACCGAACTCTTG
ATGACCTTAGAAATGAGGAGTCACTGACTCGTTCTCAAAGGATAGGGTTGAAATATTTTG
ATGACATCCAGACCAGGATTCAACGGCATGAGGTCAAAGAGATGGAACGTTTGCTACAGA
AAGTTGGAGAAGAAATTTTGCCTGGTGTGATTGTTGTGTGTGGAGGATCATATAGACGTG
GAAAGGCTTCTTGCGGTGATATGGATATTGTTATTACTCATCCTGATAGAAAAAGTCATG
AAGGCTTTCTTCCCAAGTTTGTAAGACGTCTAAAGGAGATCGAGTTTTTAAGAGAAGATT
TGGTCTTCACTGTTCATAGCACAGAGGGTACAGATTCAGGAGTTGACACATATTTTGGTC
TCTGCACTTATCCTGGTCGAGAACTGCGACATCGTATTGACTTGAAGGTGTATCCAAGGG
ATATATATGCATTTGGACTGATAGCATGGACGGGAAATGACGTCTTGAATAGAAGACTTA
GATTGTTAGCTGAATCGAAGGGCTTCCTTTTGGATGATACAGGGCTATATCCAGCTACTC
ATAGTTCTGCTGGAAAACGGACTAAAGGTAGTGCAAGCTTGAAGTTTGAAACTGAGAAGC
AAGTGTTCGAATTCCTTGGATTTCCCGCGCTGGAACCAAATGAAAGGAATCTATGAGAAT
CTTGAACTGTGCCAATTTTTGCTAGCTCTACGCGGGGACTTAGGACACTGGACTCGAATC
CAAGGGAGATTCTGTTTTTTGATCAAGCTGATGTTTTGACTTCCATGTCTGTAATGTATG
GAACAAAATGTTATGTGATTAAAGTAGTTGCTAGTATGTATATAGGTGTATGTATCAAGG
GCATGTCTCAATGTCGAAACACACACTATGAAGAACAAGAGCAAAAATGTGAAGTCCAGT
CCCTATGTTCGTTTTTTTGAAAACAAAAGT