Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g005800.3.1
CDS Infomation	Threonyl-tRNA synthetase (AHRD V3.3 *** AT5G26830.1)
Sequence	ATGCTCCTGGCTTCACCACTCTGTTGGCGCCTCTTCACCCAATCCATCCGCCGTCCTCCG CCGCCGTGCAAGCACTTTTCCATTCTCCGCCGCTGCTTCTCATCTACGCCACCAATGGGA AAGACTGCGAAAAGTTGCGAAGCTAATTCTAGTGCATCAATCCCGAAAGACGAAACTTAT CTAGAGAATGTTATTCCTAAACGTATCGCACTCTTCGAATCTATCCAGAATCAGCAACGC CTTCAACGACTTGCGCTCTCCCCTGATCCTATCAAGATTGAGTTAGTGGATGGGACAATT AAGGAGGGAAAGAAATGGAATACCACTCCATTGGATATAGCAAAGGAGATATCGAAGAGC TTGGCTGCAAATGCGTTGATTGCGAAGGTGAATGGGGTGCTTTGGGATTTGTCGAGGCCG TTGGAAGGCGATTGTAAGCTAGAGATCTTTAAATTTGAAACTGATGAGGGACGCGACACA TTTTGGCACTCGAGTGCTCACATTCTTGGAGAGTCGTTGGAAAGGACATTTGGATGCAAA TTGTGCATTGGACCGTGTACAACAAGAGGAGAGGGGTTCTATTATGATGCCTTTTATGGT GATCTGGGATTAAATGAGGATCATTTTCAACGGATAAAGGAGGAGGCAACAAAAGCTGTT TCGGAGAAACAACCTTTTGAACGCATTGAAGTTTCACGGCAGCAAGCTCTTGATATGTTC TCTGATAATAGGTTTAAGGTTGAAATCATTAAGGATTTACCTGAAGATAAAACAATCACA GTATACAGATGTGGACCGTTGGTTGATCTTTGTCGTGGTCCCCATATACCGAATACATCT TTTGTTAAAGCACTAGCCTGTACAAAGGCTTCATCAGCATATTGGAGAGGAGATAAGGAC CGTGAAAGCTTGCAAAGAGTTTATGGAATATCTTTTCCAGATCAGAAACAGTTGAAGGTA TACCTAGATATGCTGGCGGAAGCAAAGAAATACGATCACAGAGAGCTGACTAAGAAGCAG GAGCTTTTCTTTTTTCATCCATTAAGCCCTGGAAGTTGCTTCTTTCTTCCACATGGTGCT CGTATTTGCAACAAACTGCTGGAATTCATAAAGAGTCAGTATTGGAAGAGAGGCTACAAG GAGGTTTGGAGTCCAAATATGTACAACATGCAATTGTGGGAGACTTCTGGTCATGCTGCA AATTACAAGGAGAACATGTTTGTGTTTGAGATTGAAAAACAAGAATTTGGGCTGAAGCCA ATGAATTGCCCAGGTCATTGTTTGATATTTGATCACAGAGTTCGTTCTTACAGGGAGCTA CCACTTCGTCTGGCTGACTTTGGAGTTCTACACAGGAATGAAGCCAGTGGTGCACTCACT GGCTTAACGCGTGTCAGGAGATTCCAGCAGGATGATGCCCACATCTTCTGCAGGGAGTCA CAGATTAAGGAAGAAGTCAAGGGTGTCTTAGATTTCATTAGCTATGTGTATGAGATATTT GGTTTCACTTTTAACCTGAAGTTATCAACGAGGCCTGAAAAATATCTTGGGGACTTGGAA AGTTGGGAGAAGGCTGAAGCTGCTCTTGCAGAAGCATTGAACGAGTTTGGGAAGCCGTGG GAGATCAACGAAGGAGATGGAGCATTTTACGGTCCAAAAATTGATATCACTGTTTCAGAT GCAATGAAAAGGAAATTTCAGTGTGCAACATTGCAGCTTGATTTCCAACTTCCTCAACGA TTCAACCTGTCATACTCAGCAGAAGATGAAAGTAAGAGGGAGAGACCAGTTATGATACAT AGAGCTATACTTGGATCAGTTGAGCGCATGTTCGCTATTCTCTTGGAGCATTTCAAGGGG AAATGGCCTTTCTGGCTTAGTCCACGTCAAGCGATGGTCTGCCCTGTTTCCGACAAATCT CTGTCGTATGCATTTGAGCTCCGGGAGCGGATACATGATGCTGGTTATTATGTTGATGTT GATACCAGTGACAGGACAATCCAGAAAAAGGTACGCGAAGCTCAAATGGCACAATATAAC TATATTCTAGTTGTTGGAGAAGCTGAAGCCAGTAGTGGGCAGGTGAGCGTTCGAGTGAGA AGCAAGTCTGATCATGAAGTCATGACAGTTGACGGCCTCCTCACTCACTTCAAAGATTTG GTCGCGTCATTTCAGTAG

Peptide Sequence

PEP ID	Solyc05g005800.3.1
PEP Infomation	Threonyl-tRNA synthetase (AHRD V3.3 *** AT5G26830.1)
Sequence	MLLASPLCWRLFTQSIRRPPPPCKHFSILRRCFSSTPPMGKTAKSCEANSSASIPKDETY LENVIPKRIALFESIQNQQRLQRLALSPDPIKIELVDGTIKEGKKWNTTPLDIAKEISKS LAANALIAKVNGVLWDLSRPLEGDCKLEIFKFETDEGRDTFWHSSAHILGESLERTFGCK LCIGPCTTRGEGFYYDAFYGDLGLNEDHFQRIKEEATKAVSEKQPFERIEVSRQQALDMF SDNRFKVEIIKDLPEDKTITVYRCGPLVDLCRGPHIPNTSFVKALACTKASSAYWRGDKD RESLQRVYGISFPDQKQLKVYLDMLAEAKKYDHRELTKKQELFFFHPLSPGSCFFLPHGA RICNKLLEFIKSQYWKRGYKEVWSPNMYNMQLWETSGHAANYKENMFVFEIEKQEFGLKP MNCPGHCLIFDHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRES QIKEEVKGVLDFISYVYEIFGFTFNLKLSTRPEKYLGDLESWEKAEAALAEALNEFGKPW EINEGDGAFYGPKIDITVSDAMKRKFQCATLQLDFQLPQRFNLSYSAEDESKRERPVMIH RAILGSVERMFAILLEHFKGKWPFWLSPRQAMVCPVSDKSLSYAFELRERIHDAGYYVDV DTSDRTIQKKVREAQMAQYNYILVVGEAEASSGQVSVRVRSKSDHEVMTVDGLLTHFKDL VASFQ*

Transcript Sequence

Transcript ID	Solyc05g005800.3.1
Transcript Infomation	Threonyl-tRNA synthetase (AHRD V3.3 *** AT5G26830.1)
Sequence	AACCGCGTAAAATACTTAGAAGGCATTTACTCATATTACTATTACTTTTTAATGCCTACG ACGTCGTTATGAACATTTTACTATTAAAAACCCTGAAACATAACCCCTTCTTCAACTTTC AGTCTATATGCTCCTGGCTTCACCACTCTGTTGGCGCCTCTTCACCCAATCCATCCGCCG TCCTCCGCCGCCGTGCAAGCACTTTTCCATTCTCCGCCGCTGCTTCTCATCTACGCCACC AATGGGAAAGACTGCGAAAAGTTGCGAAGCTAATTCTAGTGCATCAATCCCGAAAGACGA AACTTATCTAGAGAATGTTATTCCTAAACGTATCGCACTCTTCGAATCTATCCAGAATCA GCAACGCCTTCAACGACTTGCGCTCTCCCCTGATCCTATCAAGATTGAGTTAGTGGATGG GACAATTAAGGAGGGAAAGAAATGGAATACCACTCCATTGGATATAGCAAAGGAGATATC GAAGAGCTTGGCTGCAAATGCGTTGATTGCGAAGGTGAATGGGGTGCTTTGGGATTTGTC GAGGCCGTTGGAAGGCGATTGTAAGCTAGAGATCTTTAAATTTGAAACTGATGAGGGACG CGACACATTTTGGCACTCGAGTGCTCACATTCTTGGAGAGTCGTTGGAAAGGACATTTGG ATGCAAATTGTGCATTGGACCGTGTACAACAAGAGGAGAGGGGTTCTATTATGATGCCTT TTATGGTGATCTGGGATTAAATGAGGATCATTTTCAACGGATAAAGGAGGAGGCAACAAA AGCTGTTTCGGAGAAACAACCTTTTGAACGCATTGAAGTTTCACGGCAGCAAGCTCTTGA TATGTTCTCTGATAATAGGTTTAAGGTTGAAATCATTAAGGATTTACCTGAAGATAAAAC AATCACAGTATACAGATGTGGACCGTTGGTTGATCTTTGTCGTGGTCCCCATATACCGAA TACATCTTTTGTTAAAGCACTAGCCTGTACAAAGGCTTCATCAGCATATTGGAGAGGAGA TAAGGACCGTGAAAGCTTGCAAAGAGTTTATGGAATATCTTTTCCAGATCAGAAACAGTT GAAGGTATACCTAGATATGCTGGCGGAAGCAAAGAAATACGATCACAGAGAGCTGACTAA GAAGCAGGAGCTTTTCTTTTTTCATCCATTAAGCCCTGGAAGTTGCTTCTTTCTTCCACA TGGTGCTCGTATTTGCAACAAACTGCTGGAATTCATAAAGAGTCAGTATTGGAAGAGAGG CTACAAGGAGGTTTGGAGTCCAAATATGTACAACATGCAATTGTGGGAGACTTCTGGTCA TGCTGCAAATTACAAGGAGAACATGTTTGTGTTTGAGATTGAAAAACAAGAATTTGGGCT GAAGCCAATGAATTGCCCAGGTCATTGTTTGATATTTGATCACAGAGTTCGTTCTTACAG GGAGCTACCACTTCGTCTGGCTGACTTTGGAGTTCTACACAGGAATGAAGCCAGTGGTGC ACTCACTGGCTTAACGCGTGTCAGGAGATTCCAGCAGGATGATGCCCACATCTTCTGCAG GGAGTCACAGATTAAGGAAGAAGTCAAGGGTGTCTTAGATTTCATTAGCTATGTGTATGA GATATTTGGTTTCACTTTTAACCTGAAGTTATCAACGAGGCCTGAAAAATATCTTGGGGA CTTGGAAAGTTGGGAGAAGGCTGAAGCTGCTCTTGCAGAAGCATTGAACGAGTTTGGGAA GCCGTGGGAGATCAACGAAGGAGATGGAGCATTTTACGGTCCAAAAATTGATATCACTGT TTCAGATGCAATGAAAAGGAAATTTCAGTGTGCAACATTGCAGCTTGATTTCCAACTTCC TCAACGATTCAACCTGTCATACTCAGCAGAAGATGAAAGTAAGAGGGAGAGACCAGTTAT GATACATAGAGCTATACTTGGATCAGTTGAGCGCATGTTCGCTATTCTCTTGGAGCATTT CAAGGGGAAATGGCCTTTCTGGCTTAGTCCACGTCAAGCGATGGTCTGCCCTGTTTCCGA CAAATCTCTGTCGTATGCATTTGAGCTCCGGGAGCGGATACATGATGCTGGTTATTATGT TGATGTTGATACCAGTGACAGGACAATCCAGAAAAAGGTACGCGAAGCTCAAATGGCACA ATATAACTATATTCTAGTTGTTGGAGAAGCTGAAGCCAGTAGTGGGCAGGTGAGCGTTCG AGTGAGAAGCAAGTCTGATCATGAAGTCATGACAGTTGACGGCCTCCTCACTCACTTCAA AGATTTGGTCGCGTCATTTCAGTAGAGGAGTCATTGTTTCTCTTGCATTATACCACTGAA GAGATGTAGTACACAATCAAGGTTCAATTTTATCTTACATTGTGTGAGATTGTAATACAT GCCAACACAAGTTGATTTTTTTTTGGTTCTTCAGCAATCAATAGCCACATTTGTATGACA AGGCTAATATAGATTCAGTAAATCTCAACTATCAGGATGGTAATTTGTCTCAGTTGTAAT CAACAGTTCAAAGTATTGATTTGAGAGTTTACTTGTTTTCCTCAAACTGATCAGCAGTAC TCCGAAAATGTTGAGCGGCGCAATGATGTTTTCCTTG