Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g005730.3.1
CDS Infomation

RRP15-like protein (AHRD V3.3 *** A0A0B2SG91_GLYSO)
Sequence

ATGGCTGAAGAATCAGTCTCGGAAGCTACAAAATGTTTTAGGAAAAGAAAGATGGAGTTC
AGGAAGAAAGGGGGTAAGGGAAAGAAGAAGCAAAAGGGTGCGCCATTTAGTGAAAAAAGA
GTAAAAATAGACAATAAAATGAAGAAGCTTTTTGAGAAGAGAGCTAGAGACTATAACTCT
GATAATGAAGATGATAATGATGGGGAGCCTTCCCCTGTAACTAGAGCTAAACGTACATCA
TATGGTAAAGACAAGCCCAAATCATATGGTAAAGACAAGCCAAAATCATATGGTAAAGAG
AAACCCACATCATATGGTAGAGACAAATCCACGTCATATCGTAAAGAGGAGGAGGATTTT
GATGAGGAATGGGCAGATGATGGAGAAGAGGATCTCAATGAGGAAATTGAGATATCTGAA
GATGAAGATGGAGAAGTTCAGCCTGGAATTACAAAGTTTATAGATGGTTGTAACGCATTC
AGACTGGCGTTCAAAAAGATTCTAAAGAAGTCTGCTTCTGATGATATACTGGGCCCTGTC
TTATCAGCACACAAGAAGCTTGTTGCGGAGAAGCTTGCTGAAGAAGATGTAGAACGAAAG
GTTAAAGGGGAGGCAAAAAAGGAGAAGCACTTGATAAGAGAGAAGGGACATGAGAAACCT
GCTAATTTCTTGGACACCTATGAAAAGTCTCTGATAGCAGTTGCAACAAAGGGAGATCCA
CCTAACTTTGTCCTTAATTTTTTTTGGGGCACTATGGTACTATCAGTTGTCAAGTTATTC
AATGCTGTTAACAAAGCACAACATGCTCAAAAAGGTTTAAATCCCTCAAGGGCAAAGGAC
GAGAAAGTAATAAAGAAGCGACGAAGAGAAGTCTTTTTCTCTGAATTGGGCAAGGCACCA
TCACAAACAACTGTATCAAAGGCTGGTGCATCCAATTCTTTGGAAGATGAAGGCCCCGCG
TGGGCTCCTCTACGTGATACCTACATGCTGACTAATCCCAAATTAAAGGACTGGGATAAG
AATCCGGACACAACTGTTGATGACGATGTAAGGATGCCAGCTGATTCAGATTCATCTGAT
GATGAATAA

Peptide Sequence

PEP ID

Solyc05g005730.3.1
PEP Infomation

RRP15-like protein (AHRD V3.3 *** A0A0B2SG91_GLYSO)
Sequence

MAEESVSEATKCFRKRKMEFRKKGGKGKKKQKGAPFSEKRVKIDNKMKKLFEKRARDYNS
DNEDDNDGEPSPVTRAKRTSYGKDKPKSYGKDKPKSYGKEKPTSYGRDKSTSYRKEEEDF
DEEWADDGEEDLNEEIEISEDEDGEVQPGITKFIDGCNAFRLAFKKILKKSASDDILGPV
LSAHKKLVAEKLAEEDVERKVKGEAKKEKHLIREKGHEKPANFLDTYEKSLIAVATKGDP
PNFVLNFFWGTMVLSVVKLFNAVNKAQHAQKGLNPSRAKDEKVIKKRRREVFFSELGKAP
SQTTVSKAGASNSLEDEGPAWAPLRDTYMLTNPKLKDWDKNPDTTVDDDVRMPADSDSSD
DE*

Transcript Sequence

Transcript ID

Solyc05g005730.3.1
Transcript Infomation

RRP15-like protein (AHRD V3.3 *** A0A0B2SG91_GLYSO)
Sequence

AAGTGTATACAACGTGAGGCCCAATATATTACATCAATTCAGCCCACTTTACTCTTTCGC
CTTCATTAGGTCCAAAACCCTCAACCCGCCGAGACTGAGAGCTGCCGTCTACTGCTCTGA
GTCTCCGCCGCCGGTTGCCGCCTGCTGATGCTCGGCCGTCTTCCTCGTCTTTAGCTTAAG
CTGTGTAAACACACGATAGAACATTATGGCTGAAGAATCAGTCTCGGAAGCTACAAAATG
TTTTAGGAAAAGAAAGATGGAGTTCAGGAAGAAAGGGGGTAAGGGAAAGAAGAAGCAAAA
GGGTGCGCCATTTAGTGAAAAAAGAGTAAAAATAGACAATAAAATGAAGAAGCTTTTTGA
GAAGAGAGCTAGAGACTATAACTCTGATAATGAAGATGATAATGATGGGGAGCCTTCCCC
TGTAACTAGAGCTAAACGTACATCATATGGTAAAGACAAGCCCAAATCATATGGTAAAGA
CAAGCCAAAATCATATGGTAAAGAGAAACCCACATCATATGGTAGAGACAAATCCACGTC
ATATCGTAAAGAGGAGGAGGATTTTGATGAGGAATGGGCAGATGATGGAGAAGAGGATCT
CAATGAGGAAATTGAGATATCTGAAGATGAAGATGGAGAAGTTCAGCCTGGAATTACAAA
GTTTATAGATGGTTGTAACGCATTCAGACTGGCGTTCAAAAAGATTCTAAAGAAGTCTGC
TTCTGATGATATACTGGGCCCTGTCTTATCAGCACACAAGAAGCTTGTTGCGGAGAAGCT
TGCTGAAGAAGATGTAGAACGAAAGGTTAAAGGGGAGGCAAAAAAGGAGAAGCACTTGAT
AAGAGAGAAGGGACATGAGAAACCTGCTAATTTCTTGGACACCTATGAAAAGTCTCTGAT
AGCAGTTGCAACAAAGGGAGATCCACCTAACTTTGTCCTTAATTTTTTTTGGGGCACTAT
GGTACTATCAGTTGTCAAGTTATTCAATGCTGTTAACAAAGCACAACATGCTCAAAAAGG
TTTAAATCCCTCAAGGGCAAAGGACGAGAAAGTAATAAAGAAGCGACGAAGAGAAGTCTT
TTTCTCTGAATTGGGCAAGGCACCATCACAAACAACTGTATCAAAGGCTGGTGCATCCAA
TTCTTTGGAAGATGAAGGCCCCGCGTGGGCTCCTCTACGTGATACCTACATGCTGACTAA
TCCCAAATTAAAGGACTGGGATAAGAATCCGGACACAACTGTTGATGACGATGTAAGGAT
GCCAGCTGATTCAGATTCATCTGATGATGAATAA