Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g005610.3.1
CDS Infomation

HD domain-containing metal-dependent phosphohydrolase family protein (AHRD V3.3 *** AT5G40270.1)
Sequence

ATGGGAGATTGTAGCAACAGCAAACTCTTACCAATGTGCGACTCCGGCGAGGCTCCGTTC
GACACACGGCGGTACTATAAGCATATTCATGATAATGTTCATGGCAACATCTATCTCGAT
AAGCAAGCTCTGAATTTCATCGACACTGAACAGTTTCAGAGGCTTCGTGAATTGAAGCAG
CTAGGTCTTGGATACATGGTTTATCCTGGGGCTGTGCACTCTCGGTTTGAGCATTCCCTA
GGGGTCTATTGGCTGGCCAGTGACGCTGTACATAGACTTAAGACCTATCAAGGACAGGAG
CTTGGTATTGAATCTTTTGATGTACAGACCGTGAAACTTGCTGGATTACTACATGATGTG
GGTCATGGGCCATTCAGTCACTTGTTTGAGCGTGAAATTCTTCCTCGGGTTCGCAGCGGC
ATTAAATGGTCCCATGAGGATATGTCTTTGAAGATGATAGACTACATTGTTGATGAGAAT
AGCATTGATATTGATTCTGGCACTTTGAAGAAAGTAAAGGAAATGATAGTTGCTTCTGAG
GCAGGTAAATCAGTGAGCTCAAAAGAGAAGCAGTTCTTGTATGATATTGTTGCTAATGGA
CGGAACGGAATAGATGTTGACAAATTTGATTACATAGAGCGTGACACCAGAGCTTGTGGT
CTTAGGTGCAATTTTCAGTTCCAGAGGCTAATGGAAACAATGCGTGTTATAGACAATGAA
ATATGTTACAGGGCAAAGGAATATCTTACGATCCACAAGCTATTTTCCACTCGTGCTGAT
TTGCATCGTACAGTCTATACGCATCCAAAAGTGAAGGCAATAGAATTCATGGTCGTGGAT
GCTTTGATAAAAGCAAATGACCATCTTGAAATTGATTCATACATTGATGAACCAGCAAAG
TACTGGATGTTAGATGATACAATTGTCAAAACAATTGAAGCTTCTACCCACCAAGATCTA
GAGGAATCCAGAAATCTGATTCGTCGAATTCGAAGGAGGGACATATACCAGTACTGTAAT
GAGTTTACTGTGTCCAAGGAGAATCTGGAGTACTTCAAAAATGTAACGGCTCAAGACATA
ATTTGTTCCCAGAATTCTGATGCTCATTTGAATGAGGAAGATGTTATTGTTACGAATATC
AAAATTGATTTGGCTAATGGAAGGAATAATCCATTGGAAAGGGTCAGCTTCTTCCAGGAT
TATGATAGTTTTGAGAAATTTCATATAAAGGAAGATTGCGTTAGTCAGTTATTGCCTACT
TGTTACCAGGATTTGATCGTTAGAGTTTATGCCAGAGATCCTAAACTGGTAGATGCTGTT
ACCAATGCATTTGAGAATTTTCAGACGAAGACTTATGGAGAGAAAACGCAAGTGCATGCA
ATTACTGAAAAAAAGAGACGCTTGAAGTACAATGGTAATTAA

Peptide Sequence

PEP ID

Solyc05g005610.3.1
PEP Infomation

HD domain-containing metal-dependent phosphohydrolase family protein (AHRD V3.3 *** AT5G40270.1)
Sequence

MGDCSNSKLLPMCDSGEAPFDTRRYYKHIHDNVHGNIYLDKQALNFIDTEQFQRLRELKQ
LGLGYMVYPGAVHSRFEHSLGVYWLASDAVHRLKTYQGQELGIESFDVQTVKLAGLLHDV
GHGPFSHLFEREILPRVRSGIKWSHEDMSLKMIDYIVDENSIDIDSGTLKKVKEMIVASE
AGKSVSSKEKQFLYDIVANGRNGIDVDKFDYIERDTRACGLRCNFQFQRLMETMRVIDNE
ICYRAKEYLTIHKLFSTRADLHRTVYTHPKVKAIEFMVVDALIKANDHLEIDSYIDEPAK
YWMLDDTIVKTIEASTHQDLEESRNLIRRIRRRDIYQYCNEFTVSKENLEYFKNVTAQDI
ICSQNSDAHLNEEDVIVTNIKIDLANGRNNPLERVSFFQDYDSFEKFHIKEDCVSQLLPT
CYQDLIVRVYARDPKLVDAVTNAFENFQTKTYGEKTQVHAITEKKRRLKYNGN*

Transcript Sequence

Transcript ID

Solyc05g005610.3.1
Transcript Infomation

HD domain-containing metal-dependent phosphohydrolase family protein (AHRD V3.3 *** AT5G40270.1)
Sequence

ATTTAAGTATGTGAGTGTGCCCTCATCTCAAATTACTTGTCATGTTTTACTATTTATCGA
TTTATAAATAATTAATTAAAAAGTGAAACGTGACAATTATTTTTGAGGCAGAAAGTAATT
ATTTTAGGTTGTGTTATAACACGCACCTTCACTGCGCGTACAGTAAGAAACTTATTTTAT
TTTGCGTATCACCGTGACTTGACCACTCACTGCAAATTCCTGTACCTGACGCCTTTCCAT
CTCCTCTCTTCATCTTTTTTCCCCTATTTAAAGCAAGTAACAGAGCAGGTGCAGGCGAAC
TTCTCTTGAACAGTTACCAATGGGAGATTGTAGCAACAGCAAACTCTTACCAATGTGCGA
CTCCGGCGAGGCTCCGTTCGACACACGGCGGTACTATAAGCATATTCATGATAATGTTCA
TGGCAACATCTATCTCGATAAGCAAGCTCTGAATTTCATCGACACTGAACAGTTTCAGAG
GCTTCGTGAATTGAAGCAGCTAGGTCTTGGATACATGGTTTATCCTGGGGCTGTGCACTC
TCGGTTTGAGCATTCCCTAGGGGTCTATTGGCTGGCCAGTGACGCTGTACATAGACTTAA
GACCTATCAAGGACAGGAGCTTGGTATTGAATCTTTTGATGTACAGACCGTGAAACTTGC
TGGATTACTACATGATGTGGGTCATGGGCCATTCAGTCACTTGTTTGAGCGTGAAATTCT
TCCTCGGGTTCGCAGCGGCATTAAATGGTCCCATGAGGATATGTCTTTGAAGATGATAGA
CTACATTGTTGATGAGAATAGCATTGATATTGATTCTGGCACTTTGAAGAAAGTAAAGGA
AATGATAGTTGCTTCTGAGGCAGGTAAATCAGTGAGCTCAAAAGAGAAGCAGTTCTTGTA
TGATATTGTTGCTAATGGACGGAACGGAATAGATGTTGACAAATTTGATTACATAGAGCG
TGACACCAGAGCTTGTGGTCTTAGGTGCAATTTTCAGTTCCAGAGGCTAATGGAAACAAT
GCGTGTTATAGACAATGAAATATGTTACAGGGCAAAGGAATATCTTACGATCCACAAGCT
ATTTTCCACTCGTGCTGATTTGCATCGTACAGTCTATACGCATCCAAAAGTGAAGGCAAT
AGAATTCATGGTCGTGGATGCTTTGATAAAAGCAAATGACCATCTTGAAATTGATTCATA
CATTGATGAACCAGCAAAGTACTGGATGTTAGATGATACAATTGTCAAAACAATTGAAGC
TTCTACCCACCAAGATCTAGAGGAATCCAGAAATCTGATTCGTCGAATTCGAAGGAGGGA
CATATACCAGTACTGTAATGAGTTTACTGTGTCCAAGGAGAATCTGGAGTACTTCAAAAA
TGTAACGGCTCAAGACATAATTTGTTCCCAGAATTCTGATGCTCATTTGAATGAGGAAGA
TGTTATTGTTACGAATATCAAAATTGATTTGGCTAATGGAAGGAATAATCCATTGGAAAG
GGTCAGCTTCTTCCAGGATTATGATAGTTTTGAGAAATTTCATATAAAGGAAGATTGCGT
TAGTCAGTTATTGCCTACTTGTTACCAGGATTTGATCGTTAGAGTTTATGCCAGAGATCC
TAAACTGGTAGATGCTGTTACCAATGCATTTGAGAATTTTCAGACGAAGACTTATGGAGA
GAAAACGCAAGTGCATGCAATTACTGAAAAAAAGAGACGCTTGAAGTACAATGGTAATTA
AATTCTATATATCCTGCTTCTACGAGCCAGGTGTATATTTTGTGAATTATAGATTCTCAG
TCTTATTTAGCTATTAAACAATAGAAAATTCATTTTTGTGGAAAGCATTTTTCTGTCATA
CCAAGCATGTTTATTGGTACTAACAAGGAAGTGTTTTTGCAAGAGCCTTCCGAGTTTTAT
AGGGCACTCGAAAAGTCGAAATAGAGAGACAATTAGGCGAAAGATAAAAAAGAATTTTGA
ATTTTGTGATATAAAATAAAAAATGCTTTTGTAAAAAAAATTAGACTAAAAATAAAAGAT
GCATATGTTGGTACGGTTACACGATGGAAGACGTTCTTAAATTTGCGTCAATGTATCAGT
CTTCTCCTCATTCTGAGAAATTTATGTTCCAAAAAATGCCTTCAAATTTTGACACAAATA
GAACATGAAAAAAATAAGTATTTTGCTCCGTACCAAAATACTTAGTGGCTTCGTTCATTT
TATAAGGATAACAATTCTATTTAAATGTGAAACGGTTCTCATTTGAGAAATGAAGATTTA
AGATCACGTTCATTCCCATCTAATACTGCTGGAAACAGTTAAAAATTCCAAATATAAAAA
GAAAACTATTAAGCCCTTCACAACAACATACCCTGTTGTGATCCCACAAATATGGGGCCT
TTGCTTCTCAAAAATTACCTCCAGTAAAAAAGGTGGGATATTTCTGATATGTAAGAGAAA
ACAGCACAAACATGGAAAGCAAAGCAACCTTGAAGCTGGAATGAATTAAGAGAATCACAA
GATAACTTTTGACCTAAACTATTTGTCATTTTTAAGCTTGAAAGAAAACAATTCTACAAT
GATTTGATAGAGTAGCAAGAGTTAATGAATATGCTTTCAAGTTACAGGTGAGAACACAAC
TGAAATTAGGATTTGGGCCTTAAAGCCAGACCTGTCTCAACTTTCTTGATTTCAAATATA
AGCATCCTCCACATCTTCAGAACAAACATTTCAGCTTCTTCATCTAATATACTTTGGA