Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g005580.3.1
CDS Infomation	DUF936 family protein (AHRD V3.3 *** G7K1E3_MEDTR)
Sequence	ATGGCAGCATTAGCACCTGGGATTTTGTTGAAGTTATTAAATGGGATGAAATCAGGGGTG AAACCTACAAGTGAACATAGGAGTTCACTTTTGCAGGTTACTGATATTGTTCCTGCAGAT CTTGATGAGAAGAATTTATGGCCAAAGCATGGATTTTTCATCAAGGTATCGGATTCTTCG CATTCCATTTATGTAAGTCTTCCAGATGAGCAAGATGATTTGGTTTTAAGTAATAAAATG CAGCTAGGACAGTTCATTTATGTCGATAGATTAGAGCCCGGTTCGCCTGTTCCTGTTGTT AAAGGTGCTAAGCCTCTTCCTGGGAGGCACCCTCTTGTGGGAACTCCAGAACCATTAATG GGGTTGAGAGGAAAAGGAGAGAAAGTTGAACGAAAATTCAATCAGAGTCAGTCAGCTCCT AGAAGGGGTTCTTGGGGAACAGGCCAAAATGGGGTTGAAGCTGTTGCTTCTTCTCCTCAA GTTTTGAAGCCAGTTCCTATTGATTTCGATCAATGTACACCGATAAAAGAGAGGTCTAGT GCTGTCAAATTTGCGCGAATTATTCCAATGTCACCTCTTATTCGGGGGAAATTCTCCAAA GATGGAGGAGCTAGTGGTGGGATGGTAAGGTCATCAGCCGGTGGCGCGTTGTTATCTAAA TTGATGGAAGCTAAAGGGGAAAGTCCTTCTATGGTGAGAAAAAGTTGTGCTACCCCTAGC ATGATGAAATTTCCAAGGAGCAAAAGTGTAACAGATCGCGATCGAGAACAAAGAATTGTC AATTCACCTTTAAACTCAGCTACACAGGAGAAGAAAAGTTCAACCCCACCACCTAGTTTA CGGAGTGCACGAATGGCAGCTTCACCAACAGTAGGCAGAGACTCTCAAAGACTCTCCAAT TCTAAAAAATCGTCTCTAGAACAACAATCCCAGCCTATTGATTCTCTACCTCATGACAAC ACCAGTCTGACTGCAAATCTGCCTGGAAAACTTAGTATGTTGGGAAAGGAAGCTGTACAA CAAAGGGAAAATGCACAGAGAATTGCTCTTCAAGCACTAAGGGATGCATCAGCTACAGAA AATCTCGTGCGGTCTCTAAAGGTGTTTTCGAACTTGAGTAGAGCTGCGAAACCTGATGCA CCAACAGCCTGTTTTGATCAATTTATTGAGTTTCATGAACAACTTGTGCAAGCTGTGGCA GAAATGGTATCCATTCAATCAGCAACAGCTTCAAGCGAAACGTCACAAACTCCAAAAGCT GAACAAGAGAATGGCGTTGCCCCTATTCTACACGAACTAGTGCAGAATTCATTGGAAGAA TCACGAGACAGTGAATCAAATGCATCGAAGAGGAGAGCTGCACTTTACAAATCCATTGCA GTCTTTCCTGAAAGGAGTGATCAAAAGTCAATTCTTGGAAAGCATTTGAGATCAACATCA AAGGCAATAAAAGGAGTATTAAACACTAGCATAAATGAGAACGACGAGAACAAGAAACCT GCTTCTACTTCGATAAGCAGCAGCATCTCCAATACAATCAAATTGGGAAAACAGATTGAG AGTGAATCAGGAAGTTGGTTTATGGATTTTCTTGAAAAGGCGCTGGAGAAAGGGCTGAAA AAGGCTAAAGGAAAAGTAGCATCAGACTCTTCAAGCAAAGTCCCTCAATCACTCTTGCTT AAAGTGATCAATTGGGTAGAGGTGGAACAGTTTGATTCGAATAAACGTGCTATTCATCCT AAAGCAGGACAAATTGCTAGAAAGTTGAGGATCAAGGTCAAGAATCCCTGA

Peptide Sequence

PEP ID	Solyc05g005580.3.1
PEP Infomation	DUF936 family protein (AHRD V3.3 *** G7K1E3_MEDTR)
Sequence	MAALAPGILLKLLNGMKSGVKPTSEHRSSLLQVTDIVPADLDEKNLWPKHGFFIKVSDSS HSIYVSLPDEQDDLVLSNKMQLGQFIYVDRLEPGSPVPVVKGAKPLPGRHPLVGTPEPLM GLRGKGEKVERKFNQSQSAPRRGSWGTGQNGVEAVASSPQVLKPVPIDFDQCTPIKERSS AVKFARIIPMSPLIRGKFSKDGGASGGMVRSSAGGALLSKLMEAKGESPSMVRKSCATPS MMKFPRSKSVTDRDREQRIVNSPLNSATQEKKSSTPPPSLRSARMAASPTVGRDSQRLSN SKKSSLEQQSQPIDSLPHDNTSLTANLPGKLSMLGKEAVQQRENAQRIALQALRDASATE NLVRSLKVFSNLSRAAKPDAPTACFDQFIEFHEQLVQAVAEMVSIQSATASSETSQTPKA EQENGVAPILHELVQNSLEESRDSESNASKRRAALYKSIAVFPERSDQKSILGKHLRSTS KAIKGVLNTSINENDENKKPASTSISSSISNTIKLGKQIESESGSWFMDFLEKALEKGLK KAKGKVASDSSSKVPQSLLLKVINWVEVEQFDSNKRAIHPKAGQIARKLRIKVKNP*

Transcript Sequence

Transcript ID	Solyc05g005580.3.1
Transcript Infomation	DUF936 family protein (AHRD V3.3 *** G7K1E3_MEDTR)
Sequence	AATTTTACCGAATCTCACATTACCAAATAGGCTCTTTTAAGGAATAAAATAAATGCAAAA ACGAAAAAAGACATGGAGTAATATCCTATTAATTGTAACCACAAAAAGCAAAAAAGTTAC ACGAGTATATTATGTTTAATAATTCCTCTATAAGATTCAAAAAAAGATAGAAAGCCAAAA ATAATTGATAAGACTCACTCACTACATATGACCGTTACATACCTCAACGTACCAAAACTC ACAATTTTTTTAAAAAAATTCATTTATGGGACCCAAACCCTTTCGTCTTTCTCTAGTTTA CCGTTAGCCTTCAAACCCTTTCTTCTTCTTCTTCACCTTATCAACTGAACCATACAGAAA AATATCACTCTGAAATGGTCAATTTCTTCTTTGTTTTTAAGAGCTTTTGTTGACTCACTC CACTCAACTTTCTTGATTTGTTGAAAATTCTGAAAAAAAAGATCTTACTTTTCTGTAATT TCTTAATTTTCAAGAAGTGGGGTTGTTGAGGAATTTTATGTTTTGATATTGAATCACTTT ATTCAGCTTTGTTGATTCGTTATTTTCTTGAAAATTCTGAAAAAAAAAAGGTGTTATCTT TTTATAATTTCTGAAATTTCAAGATTTGGGGTTGTTGAGGAATTTCAAGTATTAATCTTG ACTCAATTTAATATCTAAAAAAGGTCTTAATTTCAAGATTATGGCAGCATTAGCACCTGG GATTTTGTTGAAGTTATTAAATGGGATGAAATCAGGGGTGAAACCTACAAGTGAACATAG GAGTTCACTTTTGCAGGTTACTGATATTGTTCCTGCAGATCTTGATGAGAAGAATTTATG GCCAAAGCATGGATTTTTCATCAAGGTATCGGATTCTTCGCATTCCATTTATGTAAGTCT TCCAGATGAGCAAGATGATTTGGTTTTAAGTAATAAAATGCAGCTAGGACAGTTCATTTA TGTCGATAGATTAGAGCCCGGTTCGCCTGTTCCTGTTGTTAAAGGTGCTAAGCCTCTTCC TGGGAGGCACCCTCTTGTGGGAACTCCAGAACCATTAATGGGGTTGAGAGGAAAAGGAGA GAAAGTTGAACGAAAATTCAATCAGAGTCAGTCAGCTCCTAGAAGGGGTTCTTGGGGAAC AGGCCAAAATGGGGTTGAAGCTGTTGCTTCTTCTCCTCAAGTTTTGAAGCCAGTTCCTAT TGATTTCGATCAATGTACACCGATAAAAGAGAGGTCTAGTGCTGTCAAATTTGCGCGAAT TATTCCAATGTCACCTCTTATTCGGGGGAAATTCTCCAAAGATGGAGGAGCTAGTGGTGG GATGGTAAGGTCATCAGCCGGTGGCGCGTTGTTATCTAAATTGATGGAAGCTAAAGGGGA AAGTCCTTCTATGGTGAGAAAAAGTTGTGCTACCCCTAGCATGATGAAATTTCCAAGGAG CAAAAGTGTAACAGATCGCGATCGAGAACAAAGAATTGTCAATTCACCTTTAAACTCAGC TACACAGGAGAAGAAAAGTTCAACCCCACCACCTAGTTTACGGAGTGCACGAATGGCAGC TTCACCAACAGTAGGCAGAGACTCTCAAAGACTCTCCAATTCTAAAAAATCGTCTCTAGA ACAACAATCCCAGCCTATTGATTCTCTACCTCATGACAACACCAGTCTGACTGCAAATCT GCCTGGAAAACTTAGTATGTTGGGAAAGGAAGCTGTACAACAAAGGGAAAATGCACAGAG AATTGCTCTTCAAGCACTAAGGGATGCATCAGCTACAGAAAATCTCGTGCGGTCTCTAAA GGTGTTTTCGAACTTGAGTAGAGCTGCGAAACCTGATGCACCAACAGCCTGTTTTGATCA ATTTATTGAGTTTCATGAACAACTTGTGCAAGCTGTGGCAGAAATGGTATCCATTCAATC AGCAACAGCTTCAAGCGAAACGTCACAAACTCCAAAAGCTGAACAAGAGAATGGCGTTGC CCCTATTCTACACGAACTAGTGCAGAATTCATTGGAAGAATCACGAGACAGTGAATCAAA TGCATCGAAGAGGAGAGCTGCACTTTACAAATCCATTGCAGTCTTTCCTGAAAGGAGTGA TCAAAAGTCAATTCTTGGAAAGCATTTGAGATCAACATCAAAGGCAATAAAAGGAGTATT AAACACTAGCATAAATGAGAACGACGAGAACAAGAAACCTGCTTCTACTTCGATAAGCAG CAGCATCTCCAATACAATCAAATTGGGAAAACAGATTGAGAGTGAATCAGGAAGTTGGTT TATGGATTTTCTTGAAAAGGCGCTGGAGAAAGGGCTGAAAAAGGCTAAAGGAAAAGTAGC ATCAGACTCTTCAAGCAAAGTCCCTCAATCACTCTTGCTTAAAGTGATCAATTGGGTAGA GGTGGAACAGTTTGATTCGAATAAACGTGCTATTCATCCTAAAGCAGGACAAATTGCTAG AAAGTTGAGGATCAAGGTCAAGAATCCCTGA