Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g005540.3.1
CDS Infomation	Polygalacturonase non-catalytic subunit AroGP3 (AHRD V3.3 *** GP3_SOLLC)
Sequence	ATGCAGGTTGTTGTGGCTAAAGATGGAGATGAATCTGGGAACCCGTTTACGCCAAAAGGT TATCTGATTAGATACTGGAATAAACATGTCTCAAATGACTTACCAAAGCCATGGTTTCTT CTGAACAAGGCATCTCCATTGAATGCTGCACAATATGCAACTTACACTAAACTTGTTGCT GATCAAAATGCATTCACTACACACCTCCAATCCTTTTGCTCTTCAGCAAATCTCATGTGT GCGCTTGATTTGTTACCAAGTCTTGAAAAACACAAAGGAGATGTCCATTTTGTCTCTTAC GGTGACAAGAACTTTACCAATTACGGTACCAAAGAATCTGGTCTCGGATTCAACTCTTTC AAGAACTATACAGAGGAAGAAAATTTCCCTGTGAATTCTTTCAGGCGCTACGGTAGAGAT TCTCCTCATGATAATCAATTTGACAACTATGGTGCCCCTGGTGGCAATACGCCTGTCCAA AGTTTCAACAGCTATAGCACAAATACTCCAGGGGGGTCTGGTCAATTCACCAATTACGCC CCGGGGTCCAATGTCCCTGATTTGCATTTCACTTCCTATTCCGACCACGGAACAGGAGGG GAACAGGACTTCAAATCCTACGGAAACGATGGAAATGCTGGTCAACAATCTTTCAAAAGC TATGGAAAAGATGGGAATGGGGCGGATAGTCAATTCACTACTTATGGAAACAATACTAAT GTTGATGGCTCAGACTTTACAAATTATGGTGAGGCAGCAAATGGGGAGAACCAAAATTTC ACATCTTATGGTTTCAACGGCAATAATCCGGCAAGCAGTTTCAACAACTACGGCGTTGGA GGTAATGGTCCATCTGAGGCTTTTAATAGTTACAGAGATCAATCGAATGTTGGAGATGAC ACGTTCACAACCTATGTTAAGGATGCAAATGGCGGTGAAGCGAATTTCACCAACTATGGT CAATCATTCAATGAAGGTACTGATGTATTCACTACTTACGGAAAAGGGGGTAATGACCCA CATATCAATTTCAAAACTTACGGAGTTAACAACACTTTCAAAGATTATGTCAAAGATACT GCTACATTTTCCAATTACCACAACAAAACTTCGCAGGATTTAGCTTCGTTGAGTGAGGTT AACGGTGGCAAAAAGGTGAATAACAGGTGGATTGAGCCCGGGAAGTTTTTCCGGGAGAAG ATGTTGAAGAGTGGTACAATCATGCCTATGCCAGATATAAAGGATAAGATGCCTAAAAGG TCCTTTTTGCCCCGGGCGATTGCTGCGAAATTACCTTTTTCTACTTCAAAGATTGATGAG CTGAAGAAAATTTTCCATGCGGCCAATGATTCACAGGTGGCAAAGATGATTGGCGATGCG CTGAGTGAGTGTGAAAGAGCACCGAGCCCTGGGGAGACGAAACAATGTGTTAATTCAGCT GAAGATATGATTGATTTCGCAACATCAGTGTTGGGTCGTAATGTGGTGGTTCGAACAACT GAGAATACAAATGGATCAAAGGGGAATATCATGATTGGATCAATAAAAGGAATCAATGGT GGAAAAGTTACCAAATCAGTATCATGTCATCAAACGCTGTACCCTTCCTTATTGTATTAC TGTCATTCGGTTCCTAAAGTCCGAGTCTACGAAGCGGATATTTTGGACCCGAATTCAAAG GCTAAGATCAACCATGGTGTTGCGATTTGCCACGTGGATACTTCTTCATGGGGACCGAGG CACGGAGCCTTCGTTGCACTCGGGTCAGGACCCGGGAAAATAGAGGTTTGTCACTGGATC TTTGAGAATGACATGACTTGGGCAACTGCTGATTGA

Peptide Sequence

PEP ID	Solyc05g005540.3.1
PEP Infomation	Polygalacturonase non-catalytic subunit AroGP3 (AHRD V3.3 *** GP3_SOLLC)
Sequence	MQVVVAKDGDESGNPFTPKGYLIRYWNKHVSNDLPKPWFLLNKASPLNAAQYATYTKLVA DQNAFTTHLQSFCSSANLMCALDLLPSLEKHKGDVHFVSYGDKNFTNYGTKESGLGFNSF KNYTEEENFPVNSFRRYGRDSPHDNQFDNYGAPGGNTPVQSFNSYSTNTPGGSGQFTNYA PGSNVPDLHFTSYSDHGTGGEQDFKSYGNDGNAGQQSFKSYGKDGNGADSQFTTYGNNTN VDGSDFTNYGEAANGENQNFTSYGFNGNNPASSFNNYGVGGNGPSEAFNSYRDQSNVGDD TFTTYVKDANGGEANFTNYGQSFNEGTDVFTTYGKGGNDPHINFKTYGVNNTFKDYVKDT ATFSNYHNKTSQDLASLSEVNGGKKVNNRWIEPGKFFREKMLKSGTIMPMPDIKDKMPKR SFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSA EDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYY CHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWI FENDMTWATAD*

Transcript Sequence

Transcript ID	Solyc05g005540.3.1
Transcript Infomation	Polygalacturonase non-catalytic subunit AroGP3 (AHRD V3.3 *** GP3_SOLLC)
Sequence	ATGCAGGTTGTTGTGGCTAAAGATGGAGATGAATCTGGGAACCCGTTTACGCCAAAAGGT TATCTGATTAGATACTGGAATAAACATGTCTCAAATGACTTACCAAAGCCATGGTTTCTT CTGAACAAGGCATCTCCATTGAATGCTGCACAATATGCAACTTACACTAAACTTGTTGCT GATCAAAATGCATTCACTACACACCTCCAATCCTTTTGCTCTTCAGCAAATCTCATGTGT GCGCTTGATTTGTTACCAAGTCTTGAAAAACACAAAGGAGATGTCCATTTTGTCTCTTAC GGTGACAAGAACTTTACCAATTACGGTACCAAAGAATCTGGTCTCGGATTCAACTCTTTC AAGAACTATACAGAGGAAGAAAATTTCCCTGTGAATTCTTTCAGGCGCTACGGTAGAGAT TCTCCTCATGATAATCAATTTGACAACTATGGTGCCCCTGGTGGCAATACGCCTGTCCAA AGTTTCAACAGCTATAGCACAAATACTCCAGGGGGGTCTGGTCAATTCACCAATTACGCC CCGGGGTCCAATGTCCCTGATTTGCATTTCACTTCCTATTCCGACCACGGAACAGGAGGG GAACAGGACTTCAAATCCTACGGAAACGATGGAAATGCTGGTCAACAATCTTTCAAAAGC TATGGAAAAGATGGGAATGGGGCGGATAGTCAATTCACTACTTATGGAAACAATACTAAT GTTGATGGCTCAGACTTTACAAATTATGGTGAGGCAGCAAATGGGGAGAACCAAAATTTC ACATCTTATGGTTTCAACGGCAATAATCCGGCAAGCAGTTTCAACAACTACGGCGTTGGA GGTAATGGTCCATCTGAGGCTTTTAATAGTTACAGAGATCAATCGAATGTTGGAGATGAC ACGTTCACAACCTATGTTAAGGATGCAAATGGCGGTGAAGCGAATTTCACCAACTATGGT CAATCATTCAATGAAGGTACTGATGTATTCACTACTTACGGAAAAGGGGGTAATGACCCA CATATCAATTTCAAAACTTACGGAGTTAACAACACTTTCAAAGATTATGTCAAAGATACT GCTACATTTTCCAATTACCACAACAAAACTTCGCAGGATTTAGCTTCGTTGAGTGAGGTT AACGGTGGCAAAAAGGTGAATAACAGGTGGATTGAGCCCGGGAAGTTTTTCCGGGAGAAG ATGTTGAAGAGTGGTACAATCATGCCTATGCCAGATATAAAGGATAAGATGCCTAAAAGG TCCTTTTTGCCCCGGGCGATTGCTGCGAAATTACCTTTTTCTACTTCAAAGATTGATGAG CTGAAGAAAATTTTCCATGCGGCCAATGATTCACAGGTGGCAAAGATGATTGGCGATGCG CTGAGTGAGTGTGAAAGAGCACCGAGCCCTGGGGAGACGAAACAATGTGTTAATTCAGCT GAAGATATGATTGATTTCGCAACATCAGTGTTGGGTCGTAATGTGGTGGTTCGAACAACT GAGAATACAAATGGATCAAAGGGGAATATCATGATTGGATCAATAAAAGGAATCAATGGT GGAAAAGTTACCAAATCAGTATCATGTCATCAAACGCTGTACCCTTCCTTATTGTATTAC TGTCATTCGGTTCCTAAAGTCCGAGTCTACGAAGCGGATATTTTGGACCCGAATTCAAAG GCTAAGATCAACCATGGTGTTGCGATTTGCCACGTGGATACTTCTTCATGGGGACCGAGG CACGGAGCCTTCGTTGCACTCGGGTCAGGACCCGGGAAAATAGAGGTTTGTCACTGGATC TTTGAGAATGACATGACTTGGGCAACTGCTGATTGA