Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g005480.2.1
CDS Infomation

Quinone oxidoreductase-like protein (AHRD V3.3 *** W9RNB1_9ROSA)
Sequence

ATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCT
TTCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAA
AAAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCCACTTAGAGTCTCT
GCTAGTTCTCAAGCAGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATG
AAAGCTTGGAGTTATACTGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTT
GCAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGATTGTTGCTGCTGCTCTTAAC
CCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCAACT
GTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTA
AAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAA
TTTGGATCCTTAGCTGAGTACACTGCTGTTGAAGAGAAACTAGTTGCTTTGAAACCCAAG
AATCTTAGTTTTGCGGAGGCTGCTGCTCTTCCTCTAGCTATTGAGACTGCTTATGAAGGT
CTTGAGAAAGCTGGATTTTCTTCTGGCAAATCCATTCTTGTTTTGGGAGGTGCTGGCGGT
GTTGGATCCCTAGTAATCCAGCTTGCTAAACATGTATTTGGTGCTTCTAAAGTAGCAGCT
ACCTCTAGCACAGGGAAGTTGGAACTCCTGAAAAGCTTAGGAGCTGATTTAGCTATTGAC
TACACTAAGGAGAATTTTGAAGATCTGCCTGACAAGTTTGATGTTGTTTATGATTCAGTT
GGTCAGGGTGAAAAGGCGGTGAAGGTAGTGAAGGAAGGTGGGAGTGTGGTAGTGCTAACA
GGGGCAGTAACTCCACCAGGTTTTAGATTTGTGGTGACATCAAATGGAGAGATGTTGAAG
AAACTGAACCCATACTTGGAAAGTGGGAAGGTGAAACCAGTGATAGATCCAAAGGGACCA
TTCTCATTTGATAAGGTTGTGGATGCTTTCTCTTATCTTGAAACTGGAAGAGCCACTGGG
AAAGTTGTTATTCATCCCATTCCTTGA

Peptide Sequence

PEP ID

Solyc05g005480.2.1
PEP Infomation

Quinone oxidoreductase-like protein (AHRD V3.3 *** W9RNB1_9ROSA)
Sequence

MEALLSSTTLQLKPLHPPSSFSSLHSPFSSISVLRVKGSKKAETFIQRSNFSTVLPLRVS
ASSQAAAAETSTSISIPSEMKAWSYTDYGSVDVLKLESNVAVPDIKEDQVLIKIVAAALN
PVDFKRRLGKFKATDSPLPTVPGYDVAGVVVKVGSQVKGLKEGDEVYGDIHEKALDGPKQ
FGSLAEYTAVEEKLVALKPKNLSFAEAAALPLAIETAYEGLEKAGFSSGKSILVLGGAGG
VGSLVIQLAKHVFGASKVAATSSTGKLELLKSLGADLAIDYTKENFEDLPDKFDVVYDSV
GQGEKAVKVVKEGGSVVVLTGAVTPPGFRFVVTSNGEMLKKLNPYLESGKVKPVIDPKGP
FSFDKVVDAFSYLETGRATGKVVIHPIP*

Transcript Sequence

Transcript ID

Solyc05g005480.2.1
Transcript Infomation

Quinone oxidoreductase-like protein (AHRD V3.3 *** W9RNB1_9ROSA)
Sequence

CAAAAAAAAGAAAATAGAAGCCAAAATCAATCATTTCATCTTATCTATCATGCACATAAA
TTGTTTGAGGAAAATACTGAGTGAGGGGTAAAAAAACCAGCTGGAAAGAAAGAAGAACAA
TGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTT
TCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAA
AAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCCACTTAGAGTCTCTG
CTAGTTCTCAAGCAGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATGA
AAGCTTGGAGTTATACTGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTTG
CAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGATTGTTGCTGCTGCTCTTAACC
CTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCAACTG
TGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTAA
AAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAAT
TTGGATCCTTAGCTGAGTACACTGCTGTTGAAGAGAAACTAGTTGCTTTGAAACCCAAGA
ATCTTAGTTTTGCGGAGGCTGCTGCTCTTCCTCTAGCTATTGAGACTGCTTATGAAGGTC
TTGAGAAAGCTGGATTTTCTTCTGGCAAATCCATTCTTGTTTTGGGAGGTGCTGGCGGTG
TTGGATCCCTAGTAATCCAGCTTGCTAAACATGTATTTGGTGCTTCTAAAGTAGCAGCTA
CCTCTAGCACAGGGAAGTTGGAACTCCTGAAAAGCTTAGGAGCTGATTTAGCTATTGACT
ACACTAAGGAGAATTTTGAAGATCTGCCTGACAAGTTTGATGTTGTTTATGATTCAGTTG
GTCAGGGTGAAAAGGCGGTGAAGGTAGTGAAGGAAGGTGGGAGTGTGGTAGTGCTAACAG
GGGCAGTAACTCCACCAGGTTTTAGATTTGTGGTGACATCAAATGGAGAGATGTTGAAGA
AACTGAACCCATACTTGGAAAGTGGGAAGGTGAAACCAGTGATAGATCCAAAGGGACCAT
TCTCATTTGATAAGGTTGTGGATGCTTTCTCTTATCTTGAAACTGGAAGAGCCACTGGGA
AAGTTGTTATTCATCCCATTCCTTGAAAGTTAGCTCTTATTTTGTACAATTTCTAATACA
TTTAGGGAAAAGGAGAAGTTTTTGTTCCTCAAAGCCTATTGTGGCATGTGGTTGATGAAA
ATAAGATGTATCTATGTTGATCATGTTGGACACACAAATAATTACTTAGGAGGATTTTTG
TGTTCACTCTTTCTTAGACATGGTTTTACCAACTTTTGAATCCATAGCAAATTGAATTTT
AAAAAAATGAAACATGTTTTCATGAACTAATTGTTAATCCAACCTTTAGGATTGAGATAA
TACATAAATGTGTCATTTAACTTGG