Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g005300.2.1
CDS Infomation

LOW QUALITY:bHLH transcription factor 084
Sequence

ATGGAAAAAGCATTAGAATGGTTAAGACCACTTGTTGATTCCAAAAATTGGGAATATTGT
GTTGTTTGGAAGTTTGGTGATGACCCTTCAAGGTTTATAGAATGGATGGGGTGTTGCTGT
TCTGGTGCAAATGGAGTTGATGTCAATGTTAAGAGAGAAAATGGAGGGAAACAGACATTT
AGTTCTCTGTGTAGAGATATTCAAGTGCAGCATCCTATTAGAACAAAGGCTTGTGAGGCT
TTAGCTCATTTTCCTCATTCTATTTCTCTTTATTCAGGGATTCAGGCAGAGGTTGTAACA
TCAAATGAACCAAAGTGGATTAATCATGCTGAGATTTCCAATTCAAATTTGTCACATGAA
TTAAAGGGTACCCTCGTATTGATCCCCGTTGCTGGTGGATTGGTTGAGCTTTACAATTCA
AAGATGATATATAAAGATCAAAAGACGATTAATTTCATCATCAATCGGTTCAAACTTGGT
TCAGAAGAAGCCAATAGTTCCGTAGCACAGAAAGAAGATCAAGTTCTTGATTTCTTTCCC
TATGAGAAATCAAACTTCTGTGCTCCTCTCCTGCAATATGCCACAAGTTTTCCTTCAAGT
GCACCTCATATTTCTCAAGTATCTGAGTCTAGTGCTAATCCCAGCATTCAAGGATCATCG
ACCGGTTCCATCCCTTCAAATGAACTTACATTGTGTCATTCACCTCCTGACCATTTATCG
CGAAATGTACCATTAAGTCAATCTACTGAAGGGTATTTTGAGCACACAGAGCTTCAGTGC
AGTGGAAACTTATCAAGAATGGAAGACACTATTTTTCCTTGGAAACAAGAAAACTATATA
GTTGCAGGAGATATGTTCAGTATGGGTAAGAAAAGGCAAAAAGGACCTTATCAGTCGAAG
AATCTTGTCACGGAGAGAAAACGAAGGAACAGAATCAAAGACGGTCTTTTTACACTTCGA
GCTTTAGTTCCCAACATCACTAAGATGGACAAAGTCGCAATACTAGGAGACTCGATTGAC
TATATAAATGAACTGCAAGAAAAAGTGAAGTTATACAAAATTGAGCTCAACAAAATAGAA
GCGGAAGTTACCAACAATGAGAGTACTCCTGAAATGGTCCTATCAGACATGACTGAAATG
TCCAAAGTTACCGGACAAACAAATGAGAAAACACAAATTTCAGTTAATACAACTGATAGG
ACGAGAATGGAGGTGGAAGTGAATCAAATTGGTGCAAGAGAGTTCTTGTTGAAGGTCTCT
GGATCACGTAAACCTGGTGGATTTACGCAGTTGATGGAGGCCATGAATTACTTAGGACTT
GAGCTAGTAAATGTGAGTTGTACCACGTCTGGAGGGGAGATCGTGAGCGTTTACATAGTA
GAGGCAAATGTAGACAGATTTATTGATGCACAGAAACTGAGATCTTCACTAATTGAGCTA
ACAAGTTGA

Peptide Sequence

PEP ID

Solyc05g005300.2.1
PEP Infomation

LOW QUALITY:bHLH transcription factor 084
Sequence

MEKALEWLRPLVDSKNWEYCVVWKFGDDPSRFIEWMGCCCSGANGVDVNVKRENGGKQTF
SSLCRDIQVQHPIRTKACEALAHFPHSISLYSGIQAEVVTSNEPKWINHAEISNSNLSHE
LKGTLVLIPVAGGLVELYNSKMIYKDQKTINFIINRFKLGSEEANSSVAQKEDQVLDFFP
YEKSNFCAPLLQYATSFPSSAPHISQVSESSANPSIQGSSTGSIPSNELTLCHSPPDHLS
RNVPLSQSTEGYFEHTELQCSGNLSRMEDTIFPWKQENYIVAGDMFSMGKKRQKGPYQSK
NLVTERKRRNRIKDGLFTLRALVPNITKMDKVAILGDSIDYINELQEKVKLYKIELNKIE
AEVTNNESTPEMVLSDMTEMSKVTGQTNEKTQISVNTTDRTRMEVEVNQIGAREFLLKVS
GSRKPGGFTQLMEAMNYLGLELVNVSCTTSGGEIVSVYIVEANVDRFIDAQKLRSSLIEL
TS*

Transcript Sequence

Transcript ID

Solyc05g005300.2.1
Transcript Infomation

LOW QUALITY:bHLH transcription factor 084
Sequence

GACTTGTCTTGTTTTTAGTATTCAAATTTCATGAAAATAACTCTGACTTACTATATTACT
CATGGAAAAAGCATTAGAATGGTTAAGACCACTTGTTGATTCCAAAAATTGGGAATATTG
TGTTGTTTGGAAGTTTGGTGATGACCCTTCAAGGTTTATAGAATGGATGGGGTGTTGCTG
TTCTGGTGCAAATGGAGTTGATGTCAATGTTAAGAGAGAAAATGGAGGGAAACAGACATT
TAGTTCTCTGTGTAGAGATATTCAAGTGCAGCATCCTATTAGAACAAAGGCTTGTGAGGC
TTTAGCTCATTTTCCTCATTCTATTTCTCTTTATTCAGGGATTCAGGCAGAGGTTGTAAC
ATCAAATGAACCAAAGTGGATTAATCATGCTGAGATTTCCAATTCAAATTTGTCACATGA
ATTAAAGGGTACCCTCGTATTGATCCCCGTTGCTGGTGGATTGGTTGAGCTTTACAATTC
AAAGATGATATATAAAGATCAAAAGACGATTAATTTCATCATCAATCGGTTCAAACTTGG
TTCAGAAGAAGCCAATAGTTCCGTAGCACAGAAAGAAGATCAAGTTCTTGATTTCTTTCC
CTATGAGAAATCAAACTTCTGTGCTCCTCTCCTGCAATATGCCACAAGTTTTCCTTCAAG
TGCACCTCATATTTCTCAAGTATCTGAGTCTAGTGCTAATCCCAGCATTCAAGGATCATC
GACCGGTTCCATCCCTTCAAATGAACTTACATTGTGTCATTCACCTCCTGACCATTTATC
GCGAAATGTACCATTAAGTCAATCTACTGAAGGGTATTTTGAGCACACAGAGCTTCAGTG
CAGTGGAAACTTATCAAGAATGGAAGACACTATTTTTCCTTGGAAACAAGAAAACTATAT
AGTTGCAGGAGATATGTTCAGTATGGGTAAGAAAAGGCAAAAAGGACCTTATCAGTCGAA
GAATCTTGTCACGGAGAGAAAACGAAGGAACAGAATCAAAGACGGTCTTTTTACACTTCG
AGCTTTAGTTCCCAACATCACTAAGATGGACAAAGTCGCAATACTAGGAGACTCGATTGA
CTATATAAATGAACTGCAAGAAAAAGTGAAGTTATACAAAATTGAGCTCAACAAAATAGA
AGCGGAAGTTACCAACAATGAGAGTACTCCTGAAATGGTCCTATCAGACATGACTGAAAT
GTCCAAAGTTACCGGACAAACAAATGAGAAAACACAAATTTCAGTTAATACAACTGATAG
GACGAGAATGGAGGTGGAAGTGAATCAAATTGGTGCAAGAGAGTTCTTGTTGAAGGTCTC
TGGATCACGTAAACCTGGTGGATTTACGCAGTTGATGGAGGCCATGAATTACTTAGGACT
TGAGCTAGTAAATGTGAGTTGTACCACGTCTGGAGGGGAGATCGTGAGCGTTTACATAGT
AGAGGCAAATGTAGACAGATTTATTGATGCACAGAAACTGAGATCTTCACTAATTGAGCT
AACAAGTTGA