Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g005260.2.1
CDS Infomation	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 - A0A151TG49_CAJCA)
Sequence	ATGTCTCAAGTCGGGGTCAATAGTCACGTCCCGAGTAAGGGTTGGGAGTTGGGTCCCAAA TGGGTCATGTCTTGGGAGCCAGGTTCTTCTTCCACTCTCATTTTGGACACTAAGAACCTG CTCAACCAACATTTCAAGATCAAGGATCTGGGGGAGATGAAGTACTTCCTTGGTCTTCAA ATTGCCAGAAGTAGCACAGGTATTTCAGTTTGTCAAAGAAAGTTTTGCCTTGATTTGGTT TCAGATCTAGGACTCACAGGCTCAAAACCTGCCAGCACTCCATTAGAAGCAAATCACAAG CTTACCAGTGTGCTATATGATGAGAGTGTAGCTGCTAGCTCAGGAAAACCATTGAATGAT GAGTTCTTAAAGGACCCTACTAGTTATCAAAAACTAATTGGGAAGTTACTTTATCTTACA ATGACAAGACCTGACATTAGTTATGCAATACAAAACCTCAGCCAATTCATGCATTCGCCT AAGAAGTCACACATGGAAGCTGCATTAAGAGTGGTTAGATATTTGAAGAATGCACCTGGC TTAGGAATCATCTTGTCATCAGAAATTTCACATGCACTGAATGTTTATTGTGATGCTGAT TGGGCTACTTGTCCCATGACAAGGAAATCAATTAGTGGCTTTGTTGTTAAACTAGGAGGT TCATTGATATCCTGGAAATCCAAGAAGCAAAATACCATATCGAGAAGCTCTGCAGAAGCA GAATACAGGAGCATGGCAAATTCGTATAATGAAGAAATGATGGGAACATTAACCGGAGAT TTTACAGAGCAGTTGAACGCGCCGCCGATAGCCGCGGATGAGGTGTTTTACAATGGTCAA ATTCGACCTCTGTTTCCATTGTTTAATCAGAGTCTTCTTTTATCTGACGAAGAATTGGAA GCTTTGAAGGAACAATTACCGATCAGGCCACCGGTGAAGAAGATATTTATACAAACGGAA GACAACCCAATTCCGGCGAGTTCAAATTCGTTAACGGAGAGTGAAGAAATCGTCGGACCC TTTTGTGAATGGTCAAAAAATAAAGCAATTGAAGCAACATCGGACAATCCTGAGGTTTGT AAAAAGAGTAATTCAACCGGATTTTCAAAGTTATGGAGATTTAAAGACTTTCTTCACCGG AGTAACAGTGACGGAAGAGATACCTTTGTATTCTTAAACCCAACAACTCCGGCAGCGAAA GTAGAGGAAAAAATTGTTCGGACAGATGAAACGACAACGTCGGAGAAGAAAAAGAAGGAG ATCTCCGGCGAAGTGAAAGTCATCGGAAAAGTAACGAAGAAGATGAAGAAGGTTGTGAAG AAGAGTGAAGGGGTTTTAGCTCATGAAGCTTATATGAAGAGTAAAGCTAAAGCTGAAGAT CGCCGGCGATCGTATCTTCCTTATCGGCCGGAGCTCGTCGGATTTTTCACAAATGTGAAC GGTGGATTAACGAAGAATGTGCACCCATTCTAA

Peptide Sequence

PEP ID	Solyc05g005260.2.1
PEP Infomation	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 - A0A151TG49_CAJCA)
Sequence	MSQVGVNSHVPSKGWELGPKWVMSWEPGSSSTLILDTKNLLNQHFKIKDLGEMKYFLGLQ IARSSTGISVCQRKFCLDLVSDLGLTGSKPASTPLEANHKLTSVLYDESVAASSGKPLND EFLKDPTSYQKLIGKLLYLTMTRPDISYAIQNLSQFMHSPKKSHMEAALRVVRYLKNAPG LGIILSSEISHALNVYCDADWATCPMTRKSISGFVVKLGGSLISWKSKKQNTISRSSAEA EYRSMANSYNEEMMGTLTGDFTEQLNAPPIAADEVFYNGQIRPLFPLFNQSLLLSDEELE ALKEQLPIRPPVKKIFIQTEDNPIPASSNSLTESEEIVGPFCEWSKNKAIEATSDNPEVC KKSNSTGFSKLWRFKDFLHRSNSDGRDTFVFLNPTTPAAKVEEKIVRTDETTTSEKKKKE ISGEVKVIGKVTKKMKKVVKKSEGVLAHEAYMKSKAKAEDRRRSYLPYRPELVGFFTNVN GGLTKNVHPF*

Transcript Sequence

Transcript ID	Solyc05g005260.2.1
Transcript Infomation	Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 - A0A151TG49_CAJCA)
Sequence	ATGTCTCAAGTCGGGGTCAATAGTCACGTCCCGAGTAAGGGTTGGGAGTTGGGTCCCAAA TGGGTCATGTCTTGGGAGCCAGGTTCTTCTTCCACTCTCATTTTGGACACTAAGAACCTG CTCAACCAACATTTCAAGATCAAGGATCTGGGGGAGATGAAGTACTTCCTTGGTCTTCAA ATTGCCAGAAGTAGCACAGGTATTTCAGTTTGTCAAAGAAAGTTTTGCCTTGATTTGGTT TCAGATCTAGGACTCACAGGCTCAAAACCTGCCAGCACTCCATTAGAAGCAAATCACAAG CTTACCAGTGTGCTATATGATGAGAGTGTAGCTGCTAGCTCAGGAAAACCATTGAATGAT GAGTTCTTAAAGGACCCTACTAGTTATCAAAAACTAATTGGGAAGTTACTTTATCTTACA ATGACAAGACCTGACATTAGTTATGCAATACAAAACCTCAGCCAATTCATGCATTCGCCT AAGAAGTCACACATGGAAGCTGCATTAAGAGTGGTTAGATATTTGAAGAATGCACCTGGC TTAGGAATCATCTTGTCATCAGAAATTTCACATGCACTGAATGTTTATTGTGATGCTGAT TGGGCTACTTGTCCCATGACAAGGAAATCAATTAGTGGCTTTGTTGTTAAACTAGGAGGT TCATTGATATCCTGGAAATCCAAGAAGCAAAATACCATATCGAGAAGCTCTGCAGAAGCA GAATACAGGAGCATGGCAAATTCGTATAATGAAGAAATGATGGGAACATTAACCGGAGAT TTTACAGAGCAGTTGAACGCGCCGCCGATAGCCGCGGATGAGGTGTTTTACAATGGTCAA ATTCGACCTCTGTTTCCATTGTTTAATCAGAGTCTTCTTTTATCTGACGAAGAATTGGAA GCTTTGAAGGAACAATTACCGATCAGGCCACCGGTGAAGAAGATATTTATACAAACGGAA GACAACCCAATTCCGGCGAGTTCAAATTCGTTAACGGAGAGTGAAGAAATCGTCGGACCC TTTTGTGAATGGTCAAAAAATAAAGCAATTGAAGCAACATCGGACAATCCTGAGGTTTGT AAAAAGAGTAATTCAACCGGATTTTCAAAGTTATGGAGATTTAAAGACTTTCTTCACCGG AGTAACAGTGACGGAAGAGATACCTTTGTATTCTTAAACCCAACAACTCCGGCAGCGAAA GTAGAGGAAAAAATTGTTCGGACAGATGAAACGACAACGTCGGAGAAGAAAAAGAAGGAG ATCTCCGGCGAAGTGAAAGTCATCGGAAAAGTAACGAAGAAGATGAAGAAGGTTGTGAAG AAGAGTGAAGGGGTTTTAGCTCATGAAGCTTATATGAAGAGTAAAGCTAAAGCTGAAGAT CGCCGGCGATCGTATCTTCCTTATCGGCCGGAGCTCGTCGGATTTTTCACAAATGTGAAC GGTGGATTAACGAAGAATGTGCACCCATTCTAA