Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g082900.3.1
CDS Infomation

BUB1-related (AHRD V3.3 *** A0A061FST1_THECC)
Sequence

ATGGAGAAGGTAGGAGGAGATTACGTATTGGATAAGGAGGCAGAGTTCTTAGCGTCGAAG
CAAGAGACTGGTCACGAGTGGGAACTCTTCAAGGAAAATGTCAGACCTTTGAAGAGAGGA
CGCAACGTTAATCTTCTCAATAATGCTCTTAAGTCTAGTACCGATTATCAACTCAAGAAA
TCTCTTCTTGACAAACGAAGGGAATTTATTGAAGCAATTGACAAGTACAAAGGTGAAGAT
CCTCTTCACCCATGGCTCCAGTGCATCAAGTGGGTGCAAGAGGCTTTCCCTCCCGGTGGG
GACAGTTCTGGACTTATAGTTATTTATGAACAATGTGTCCGCACCTTTTGGCACGATGAA
CTATATAAGAATGACCTCCGTTACTTGAAAGTGTGGCTGGAATATGCTGAAAATTGTATG
GATGCTGAAGTCATTTATAGCTTTCTGGAGGCTAACAAAATTGGACTGACACATTCTTCA
TTCTACATAGCCTATGCTTTGCACATGGAATCTCAAAATAAAATTAAAACAGCAAACGAG
ATCTTCAATCGGGGGCTATCTATGAATGCAGAACCTGAAGAGAAATTGAAAGTATCCTAC
AAGAAGTTTTTCAGTCGTTCAATGGGTCGCCCCAAAGCAGCAGAGGAGGAGATAACAGAA
CACCAGCTTCCAATGAGAAGCTTTGGCACACTGTTGGCTAGGGGGGAAGCTCGAAACCAA
ACAACAGGAACTTCTGAATTGTCCCGGAAGAAAATGAAACCAGATAGAGCTCAGGGGAGC
CTATTTTCCATTTACAAAGATGCAAATGCCGGAATGTCATCAACTCTTCAATCAGAAATA
CCAAAGCTAGAGAATACATCATGGCACTGTCTTGGTGCCCGAGCAGATAGGAACAAGGAG
AATCAGGCAATCCCTTCAAAGTGGACATCTAATAAGATTCCTCAAAGACACGGGCTTAGA
AATCGAGGAGCTACTACTACCACCACTCCGTGCCTAGAGATCTTTGTGGATGAGGAATGT
GCCAAAGCACAGGAGAAGGACTCTGCTGCTGGTGTAAAGGCTTCTAGTCTGCAGCTTAGA
CGAGGAGATGACAAAGACATAAAAAAGGAGACTGAGTTGCTGAGGGAGAATCCCCTGCGT
TATTTTCCACCAAGCTCATTACCAAGATGA

Peptide Sequence

PEP ID

Solyc04g082900.3.1
PEP Infomation

BUB1-related (AHRD V3.3 *** A0A061FST1_THECC)
Sequence

MEKVGGDYVLDKEAEFLASKQETGHEWELFKENVRPLKRGRNVNLLNNALKSSTDYQLKK
SLLDKRREFIEAIDKYKGEDPLHPWLQCIKWVQEAFPPGGDSSGLIVIYEQCVRTFWHDE
LYKNDLRYLKVWLEYAENCMDAEVIYSFLEANKIGLTHSSFYIAYALHMESQNKIKTANE
IFNRGLSMNAEPEEKLKVSYKKFFSRSMGRPKAAEEEITEHQLPMRSFGTLLARGEARNQ
TTGTSELSRKKMKPDRAQGSLFSIYKDANAGMSSTLQSEIPKLENTSWHCLGARADRNKE
NQAIPSKWTSNKIPQRHGLRNRGATTTTTPCLEIFVDEECAKAQEKDSAAGVKASSLQLR
RGDDKDIKKETELLRENPLRYFPPSSLPR*

Transcript Sequence

Transcript ID

Solyc04g082900.3.1
Transcript Infomation

BUB1-related (AHRD V3.3 *** A0A061FST1_THECC)
Sequence

ATATTGCGAAAATCTGGAATTTAAAGGAGGGTCCAACGGCTATGAAAGGAAGGGTTTAGG
GCACAAAACAATTTCAAATTTGAAAGAAGGCTCTCAAAAAAACACCACCACAAGGAAGCA
GCAAGAAGAAGAAATGGAGAAGGTAGGAGGAGATTACGTATTGGATAAGGAGGCAGAGTT
CTTAGCGTCGAAGCAAGAGACTGGTCACGAGTGGGAACTCTTCAAGGAAAATGTCAGACC
TTTGAAGAGAGGACGCAACGTTAATCTTCTCAATAATGCTCTTAAGTCTAGTACCGATTA
TCAACTCAAGAAATCTCTTCTTGACAAACGAAGGGAATTTATTGAAGCAATTGACAAGTA
CAAAGGTGAAGATCCTCTTCACCCATGGCTCCAGTGCATCAAGTGGGTGCAAGAGGCTTT
CCCTCCCGGTGGGGACAGTTCTGGACTTATAGTTATTTATGAACAATGTGTCCGCACCTT
TTGGCACGATGAACTATATAAGAATGACCTCCGTTACTTGAAAGTGTGGCTGGAATATGC
TGAAAATTGTATGGATGCTGAAGTCATTTATAGCTTTCTGGAGGCTAACAAAATTGGACT
GACACATTCTTCATTCTACATAGCCTATGCTTTGCACATGGAATCTCAAAATAAAATTAA
AACAGCAAACGAGATCTTCAATCGGGGGCTATCTATGAATGCAGAACCTGAAGAGAAATT
GAAAGTATCCTACAAGAAGTTTTTCAGTCGTTCAATGGGTCGCCCCAAAGCAGCAGAGGA
GGAGATAACAGAACACCAGCTTCCAATGAGAAGCTTTGGCACACTGTTGGCTAGGGGGGA
AGCTCGAAACCAAACAACAGGAACTTCTGAATTGTCCCGGAAGAAAATGAAACCAGATAG
AGCTCAGGGGAGCCTATTTTCCATTTACAAAGATGCAAATGCCGGAATGTCATCAACTCT
TCAATCAGAAATACCAAAGCTAGAGAATACATCATGGCACTGTCTTGGTGCCCGAGCAGA
TAGGAACAAGGAGAATCAGGCAATCCCTTCAAAGTGGACATCTAATAAGATTCCTCAAAG
ACACGGGCTTAGAAATCGAGGAGCTACTACTACCACCACTCCGTGCCTAGAGATCTTTGT
GGATGAGGAATGTGCCAAAGCACAGGAGAAGGACTCTGCTGCTGGTGTAAAGGCTTCTAG
TCTGCAGCTTAGACGAGGAGATGACAAAGACATAAAAAAGGAGACTGAGTTGCTGAGGGA
GAATCCCCTGCGTTATTTTCCACCAAGCTCATTACCAAGATGATCGATCTCACAGAAGAA
AGTCATCATTGTGTGCTGGGATTTCTCATCTCAGAGTTACTCAACTTGTATCTTAAAAGT
GTATGGAGACAATTCCTCTTTGCCCAGTGCAAGCACCGTTACAGATGTTCTAAATATATC
GAGTGGAGTTGAGGAGACATTGTTGTATGTTTGGTTTTGGCAGGCTTGAGCCAAATCCTC
CAGTATTTTGTTATTTAGATGGAATGATTTTATATGATTGCAACAGTTATTGATGTAGTA
TACAATTGCGCTTTCTCGTAATTAGCTCTTGGTTAAAGAGTTCTGCTTCACATTGGTTTT
CTTATTTTGTTTATGATGATTAATTTTGTTGTTAATAATCCCCATCCAACAATTTTAAAG
GGTGTGTACACCGTGAATTATTTCCTGGTATCGAAAGAGTTATTTACTACTTGAGCTATG
GACTTCAAAATCCTGCCTTTAAAACCTTGTCATTTAATCAGACACTCCTTTTTTTTTTTA
AAATAAAATTCTTTTTTATATCAAGGCAAATATTAACTGAACCACGGAAGAACTGTGTAT
AATTTAAGAATCTTAAATAGTACTTGTTAGTTTTAAGGAATGATTTCTTTTTCTCGAAAG
AAAATCAAGATTCTCCTAAGTTGTTAA