Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g082470.2.1
CDS Infomation

WD40 repeat protein (AHRD V3.3 *** Q1JV04_IPOPU)
Sequence

ATGGGAGCAAGCAGTGATCCGAACCAGCAAGATGGTTCCGACGAACAGCAGAGACGCTCC
GAGATCTACACCTACGAGGCTCCATGGCACATATACGCTATGAATTGGAGTGTTCGCAAG
GATAAGAAGTATCGTCTCGCCATTGCTAGCTTGCTCGAGCAGTACCAAAACCGAGTTGAG
ATTGTGCAGCTTGATGACTCTAATGGTGAGATTCGGTCCGACCCGAAACTCTCATTTGAG
CACCCGTATCCGCCTACGAAAGTTATCTTCATACCCGATAAGGAGTGCCAGAAGCCGGAC
CTTATCGCTACCTCTAGTGATTATCTCAGGATTTGGCGAGTCTCCAATGATAATAGTCGG
GTTGACATGAAGAGTCTTCTTAATAACAACCGGAACAGTGAGTTTTCCGGTCCGTTAACC
TCATTTGACTGGAATGAAGCTGAGCCGAGGCGGATTGGTACGTCGAGTATTGATACTACC
TGTACTATATGGGATATTGAGAGGGAGACTGTCGATACCCAGTTAATTGCTCATGATAAG
GAGGTTTATGATATTGCTTGGGGTGGGGTTGGAGTTTTTGCTTCTGTTTCAGCTGATGGG
TCTGTTAGGGTTTTTGATCTTCGTGATAAGGAGCACTCTACGATAATCTATGAGAGTTCT
GAGCCTGATACTCCTCTTGTACGCCTTGGATGGAACAAGCAGGATCCTAGGTATATGGCC
ACCATAATAATGGACAGTGCAAAGGTTGTAGTTTTGGACATCCGTTTCCCGACACTGCCG
GTGGTGGAACTACAGAGGCACCAGGCTAGTGTGAATGCCATTGCCTGGGCTCCTCACAGC
TCTTGCCATATTTGTACTGCTGGTGACGACTCACAGGCGCTTATCTGGGATCTCTCTTCA
ATGGGTCAGCCAATAGAAGGTGGATTGGATCCAATTCTGGCTTATACTGCAGGTGCAGAA
ATCGAGCAGCTTCAGTGGTCCTCATCCCAGCCTGATTGGGTTGCCATTGCATTCTCCAAC
AAGCTTCAGATTCTAAGGTGGATCTTTGAGAAAGAGGACAAATTCAAACAGCCAGGAGAG
AGATATAGGTCAAGGGAACCGGGACAGCTAGTTTGGTACATCGGCTATCTGCTGGCAAGA
AAGAAAGATCTTCCTGCTGTTGGGTTGAGGTCTCTATCCGATTCTCAATTCGCGTCCCAT
GTAGATCCAAAGAGAGATAAATATTGCAATGTTTTGCATGAACTGTGCTTCTGGCTG

Peptide Sequence

PEP ID

Solyc04g082470.2.1
PEP Infomation

WD40 repeat protein (AHRD V3.3 *** Q1JV04_IPOPU)
Sequence

MGASSDPNQQDGSDEQQRRSEIYTYEAPWHIYAMNWSVRKDKKYRLAIASLLEQYQNRVE
IVQLDDSNGEIRSDPKLSFEHPYPPTKVIFIPDKECQKPDLIATSSDYLRIWRVSNDNSR
VDMKSLLNNNRNSEFSGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIERETVDTQLIAHDK
EVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMA
TIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS
MGQPIEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSNKLQILRWIFEKEDKFKQPGE
RYRSREPGQLVWYIGYLLARKKDLPAVGLRSLSDSQFASHVDPKRDKYCNVLHELCFWL

Transcript Sequence

Transcript ID

Solyc04g082470.2.1
Transcript Infomation

WD40 repeat protein (AHRD V3.3 *** Q1JV04_IPOPU)
Sequence

ATGGGAGCAAGCAGTGATCCGAACCAGCAAGATGGTTCCGACGAACAGCAGAGACGCTCC
GAGATCTACACCTACGAGGCTCCATGGCACATATACGCTATGAATTGGAGTGTTCGCAAG
GATAAGAAGTATCGTCTCGCCATTGCTAGCTTGCTCGAGCAGTACCAAAACCGAGTTGAG
ATTGTGCAGCTTGATGACTCTAATGGTGAGATTCGGTCCGACCCGAAACTCTCATTTGAG
CACCCGTATCCGCCTACGAAAGTTATCTTCATACCCGATAAGGAGTGCCAGAAGCCGGAC
CTTATCGCTACCTCTAGTGATTATCTCAGGATTTGGCGAGTCTCCAATGATAATAGTCGG
GTTGACATGAAGAGTCTTCTTAATAACAACCGGAACAGTGAGTTTTCCGGTCCGTTAACC
TCATTTGACTGGAATGAAGCTGAGCCGAGGCGGATTGGTACGTCGAGTATTGATACTACC
TGTACTATATGGGATATTGAGAGGGAGACTGTCGATACCCAGTTAATTGCTCATGATAAG
GAGGTTTATGATATTGCTTGGGGTGGGGTTGGAGTTTTTGCTTCTGTTTCAGCTGATGGG
TCTGTTAGGGTTTTTGATCTTCGTGATAAGGAGCACTCTACGATAATCTATGAGAGTTCT
GAGCCTGATACTCCTCTTGTACGCCTTGGATGGAACAAGCAGGATCCTAGGTATATGGCC
ACCATAATAATGGACAGTGCAAAGGTTGTAGTTTTGGACATCCGTTTCCCGACACTGCCG
GTGGTGGAACTACAGAGGCACCAGGCTAGTGTGAATGCCATTGCCTGGGCTCCTCACAGC
TCTTGCCATATTTGTACTGCTGGTGACGACTCACAGGCGCTTATCTGGGATCTCTCTTCA
ATGGGTCAGCCAATAGAAGGTGGATTGGATCCAATTCTGGCTTATACTGCAGGTGCAGAA
ATCGAGCAGCTTCAGTGGTCCTCATCCCAGCCTGATTGGGTTGCCATTGCATTCTCCAAC
AAGCTTCAGATTCTAAGGTGGATCTTTGAGAAAGAGGACAAATTCAAACAGCCAGGAGAG
AGATATAGGTCAAGGGAACCGGGACAGCTAGTTTGGTACATCGGCTATCTGCTGGCAAGA
AAGAAAGATCTTCCTGCTGTTGGGTTGAGGTCTCTATCCGATTCTCAATTCGCGTCCCAT
GTAGATCCAAAGAGAGATAAATATTGCAATGTTTTGCATGAACTGTGCTTCTGGCTG